RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 CRACR2AQ9BSW2 395 aa6.83□□□□□ -1.32
CCDC60-205ENST00000546345 KRTAP9-2Q9BYQ4 174 aa6.83□□□□□ -1.32
CCDC60-205ENST00000546345 MTMR12Q9C0I1 747 aa6.83□□□□□ -1.32
CCDC60-205ENST00000546345 SLC25A18Q9H1K4 315 aa6.83□□□□□ -1.32
CCDC60-205ENST00000546345 MTG2Q9H4K7 406 aa6.83□□□□□ -1.32
CCDC60-205ENST00000546345 ERVMER34-1Q9H9K5 563 aa6.83□□□□□ -1.32
CCDC60-205ENST00000546345 PDE11AQ9HCR9 933 aa6.83□□□□□ -1.32
CCDC60-205ENST00000546345 PRSS16Q9NQE7 514 aa6.83□□□□□ -1.32
CCDC60-205ENST00000546345 UCKL1Q9NWZ5 548 aa6.83□□□□□ -1.32
CCDC60-205ENST00000546345 ELOVL2Q9NXB9 296 aa6.83□□□□□ -1.32
CCDC60-205ENST00000546345 FBLN5Q9UBX5 448 aa6.83□□□□□ -1.32
CCDC60-205ENST00000546345 NUDT5Q9UKK9 219 aa6.83□□□□□ -1.32
CCDC60-205ENST00000546345 PCDHA7Q9UN72 937 aa6.83□□□□□ -1.32
CCDC60-205ENST00000546345 PLAAQ9Y263 795 aa6.83□□□□□ -1.32
CCDC60-205ENST00000546345 PCDHGA8Q9Y5G5 932 aa6.83□□□□□ -1.32
CCDC60-205ENST00000546345 APCP25054 2843 aa6.83□□□□□ -1.32
CCDC60-205ENST00000546345 H3BQF6 201 aa6.82□□□□□ -1.32
CCDC60-205ENST00000546345 H7BY64 318 aa6.82□□□□□ -1.32
CCDC60-205ENST00000546345 SEMA7AO75326 666 aa6.82□□□□□ -1.32
CCDC60-205ENST00000546345 PRPF6O94906 941 aaKnown RBP6.82□□□□□ -1.32
CCDC60-205ENST00000546345 CKMT1AP12532 417 aa6.82□□□□□ -1.32
CCDC60-205ENST00000546345 PRLRP16471 622 aa6.82□□□□□ -1.32
CCDC60-205ENST00000546345 TGM2P21980 687 aa6.82□□□□□ -1.32
CCDC60-205ENST00000546345 WARSP23381 471 aaKnown RBP6.82□□□□□ -1.32
CCDC60-205ENST00000546345 TNFRSF8P28908 595 aa6.82□□□□□ -1.32
CCDC60-205ENST00000546345 CASRP41180 1078 aa6.82□□□□□ -1.32
CCDC60-205ENST00000546345 SYKP43405 635 aa6.82□□□□□ -1.32
CCDC60-205ENST00000546345 DUSP3P51452 185 aaPredicted RBP6.82□□□□□ -1.32
CCDC60-205ENST00000546345 ZNF131P52739 623 aa6.82□□□□□ -1.32
CCDC60-205ENST00000546345 GALCP54803 685 aa6.82□□□□□ -1.32
CCDC60-205ENST00000546345 CYP4F2P78329 520 aa6.82□□□□□ -1.32
CCDC60-205ENST00000546345 TFAMQ00059 246 aaKnown RBP6.82□□□□□ -1.32
CCDC60-205ENST00000546345 SLC39A14Q15043 492 aa6.82□□□□□ -1.32
CCDC60-205ENST00000546345 EIF4HQ15056 248 aaKnown RBP6.82□□□□□ -1.32
CCDC60-205ENST00000546345 GLE1Q53GS7 698 aaKnown RBP6.82□□□□□ -1.32
CCDC60-205ENST00000546345 MROH9Q5TGP6 573 aa6.82□□□□□ -1.32
CCDC60-205ENST00000546345 PAQR9Q6ZVX9 377 aa6.82□□□□□ -1.32
CCDC60-205ENST00000546345 BRSK2Q8IWQ3 736 aa6.82□□□□□ -1.32
CCDC60-205ENST00000546345 NUP93Q8N1F7 819 aa6.82□□□□□ -1.32
CCDC60-205ENST00000546345 ARFGAP2Q8N6H7 521 aa6.82□□□□□ -1.32
CCDC60-205ENST00000546345 ZMIZ2Q8NF64 920 aa6.82□□□□□ -1.32
CCDC60-205ENST00000546345 CCHCR1Q8TD31 782 aa6.82□□□□□ -1.32
CCDC60-205ENST00000546345 PEX11GQ96HA9 241 aa6.82□□□□□ -1.32
CCDC60-205ENST00000546345 USP28Q96RU2 1077 aa6.82□□□□□ -1.32
CCDC60-205ENST00000546345 KCNK16Q96T55 309 aa6.82□□□□□ -1.32
CCDC60-205ENST00000546345 ZFYVE21Q9BQ24 234 aa6.82□□□□□ -1.32
CCDC60-205ENST00000546345 MRPL45Q9BRJ2 306 aaKnown RBP6.82□□□□□ -1.32
CCDC60-205ENST00000546345 B3GNT5Q9BYG0 378 aa6.82□□□□□ -1.32
CCDC60-205ENST00000546345 ELOVL4Q9GZR5 314 aa6.82□□□□□ -1.32
CCDC60-205ENST00000546345 PABPC3Q9H361 631 aaKnown RBP6.82□□□□□ -1.32
CCDC60-205ENST00000546345 PIF1Q9H611 641 aa6.82□□□□□ -1.32
CCDC60-205ENST00000546345 HAUS4Q9H6D7 363 aa6.82□□□□□ -1.32
CCDC60-205ENST00000546345 FAM204AQ9H8W3 233 aa6.82□□□□□ -1.32
CCDC60-205ENST00000546345 ANKZF1Q9H8Y5 726 aa6.82□□□□□ -1.32
CCDC60-205ENST00000546345 SGK2Q9HBY8 427 aa6.82□□□□□ -1.32
CCDC60-205ENST00000546345 AASDHPPTQ9NRN7 309 aa6.82□□□□□ -1.32
CCDC60-205ENST00000546345 HOMER3Q9NSC5 361 aa6.82□□□□□ -1.32
CCDC60-205ENST00000546345 EHD2Q9NZN4 543 aa6.82□□□□□ -1.32
CCDC60-205ENST00000546345 RNF14Q9UBS8 474 aa6.82□□□□□ -1.32
CCDC60-205ENST00000546345 CHORDC1Q9UHD1 332 aaPredicted RBP6.82□□□□□ -1.32
CCDC60-205ENST00000546345 LCMT1Q9UIC8 334 aa6.82□□□□□ -1.32
CCDC60-205ENST00000546345 AGO2Q9UKV8 859 aaKnown RBP6.82□□□□□ -1.32
CCDC60-205ENST00000546345 ITGA11Q9UKX5 1188 aa6.82□□□□□ -1.32
CCDC60-205ENST00000546345 SUFUQ9UMX1 484 aa6.82□□□□□ -1.32
CCDC60-205ENST00000546345 DNM3Q9UQ16 869 aa6.82□□□□□ -1.32
CCDC60-205ENST00000546345 HPSEQ9Y251 543 aa6.82□□□□□ -1.32
CCDC60-205ENST00000546345 CROCCQ5TZA2 2017 aa6.82□□□□□ -1.32
CCDC60-205ENST00000546345 ANKRD36A6QL64 1941 aa6.82□□□□□ -1.32
CCDC60-205ENST00000546345 ARHGEF17Q96PE2 2063 aaPredicted RBP6.81□□□□□ -1.32
CCDC60-205ENST00000546345 CHD5Q8TDI0 1954 aa6.81□□□□□ -1.32
CCDC60-205ENST00000546345 FAM47DPA6NHR8 397 aa6.81□□□□□ -1.32
CCDC60-205ENST00000546345 TLR4O00206 839 aa6.81□□□□□ -1.32
CCDC60-205ENST00000546345 FFAR2O15552 330 aa6.81□□□□□ -1.32
CCDC60-205ENST00000546345 LATO43561 262 aa6.81□□□□□ -1.32
CCDC60-205ENST00000546345 JAK2O60674 1132 aa6.81□□□□□ -1.32
CCDC60-205ENST00000546345 RTN2O75298 545 aa6.81□□□□□ -1.32
CCDC60-205ENST00000546345 STC2O76061 302 aa6.81□□□□□ -1.32
CCDC60-205ENST00000546345 SEC31AO94979 1220 aaKnown RBP6.81□□□□□ -1.32
CCDC60-205ENST00000546345 RTN3O95197 1032 aaPredicted RBP6.81□□□□□ -1.32
CCDC60-205ENST00000546345 IL18RAPO95256 599 aa6.81□□□□□ -1.32
CCDC60-205ENST00000546345 BMP15O95972 392 aa6.81□□□□□ -1.32
CCDC60-205ENST00000546345 GP1BAP07359 652 aa6.81□□□□□ -1.32
CCDC60-205ENST00000546345 PDGFRBP09619 1106 aa6.81□□□□□ -1.32
CCDC60-205ENST00000546345 EZRP15311 586 aaKnown RBP6.81□□□□□ -1.32
CCDC60-205ENST00000546345 ZNF18P17022 549 aa6.81□□□□□ -1.32
CCDC60-205ENST00000546345 FPR2P25090 351 aa6.81□□□□□ -1.32
CCDC60-205ENST00000546345 HNRNPH1P31943 449 aaKnown RBP6.81□□□□□ -1.32
CCDC60-205ENST00000546345 UQCRFS1P47985 274 aa6.81□□□□□ -1.32
CCDC60-205ENST00000546345 PRR5P85299 388 aa6.81□□□□□ -1.32
CCDC60-205ENST00000546345 GTF2BQ00403 316 aa6.81□□□□□ -1.32
CCDC60-205ENST00000546345 POU5F1Q01860 360 aaKnown RBP6.81□□□□□ -1.32
CCDC60-205ENST00000546345 ZBTB16Q05516 673 aa6.81□□□□□ -1.32
CCDC60-205ENST00000546345 ORC2Q13416 577 aaPredicted RBP6.81□□□□□ -1.32
CCDC60-205ENST00000546345 STIM1Q13586 685 aa6.81□□□□□ -1.32
CCDC60-205ENST00000546345 MAPRE1Q15691 268 aaKnown RBP6.81□□□□□ -1.32
CCDC60-205ENST00000546345 KRTAP21-3Q3LHN1 58 aa6.81□□□□□ -1.32
CCDC60-205ENST00000546345 DPCR1Q3MIW9 517 aa6.81□□□□□ -1.32
CCDC60-205ENST00000546345 TTC38Q5R3I4 469 aa6.81□□□□□ -1.32
CCDC60-205ENST00000546345 HYIQ5T013 277 aa6.81□□□□□ -1.32
CCDC60-205ENST00000546345 WLSQ5T9L3 541 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms