RNA–Protein interactions for RNA: ENST00000546079.5

CLPTM1-203, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-203ENST00000546079 DPH6Q7L8W6 267 aa16.6■□□□□ 0.25
CLPTM1-203ENST00000546079 SNX29P2Q8IUI4 249 aa16.6■□□□□ 0.25
CLPTM1-203ENST00000546079 LILRB4Q8NHJ6 448 aa16.6■□□□□ 0.25
CLPTM1-203ENST00000546079 AFG1LQ8WV93 481 aa16.6■□□□□ 0.25
CLPTM1-203ENST00000546079 CEP41Q9BYV8 373 aa16.6■□□□□ 0.25
CLPTM1-203ENST00000546079 OSBPL2Q9H1P3 480 aa16.6■□□□□ 0.25
CLPTM1-203ENST00000546079 MRPL46Q9H2W6 279 aaKnown RBP16.6■□□□□ 0.25
CLPTM1-203ENST00000546079 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.6■□□□□ 0.25
CLPTM1-203ENST00000546079 MAP10Q9P2G4 905 aa16.6■□□□□ 0.25
CLPTM1-203ENST00000546079 KLQ9UEF7 1012 aa16.6■□□□□ 0.25
CLPTM1-203ENST00000546079 TSPAN16Q9UKR8 245 aa16.6■□□□□ 0.25
CLPTM1-203ENST00000546079 C16orf96A6NNT2 1141 aa16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 A8MU76 341 aa16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 H0Y858 1186 aa16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 PEX10O60683 326 aa16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 CHEK2O96017 543 aa16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 HNRNPLP14866 589 aaKnown RBP eCLIP16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 ARSAP15289 507 aa16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 POLR2EP19388 210 aaKnown RBP16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 SAT1P21673 171 aa16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 OLIG2Q13516 323 aa16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 CTF1Q16619 201 aa16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 CYP51A1Q16850 503 aa16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 Q3C1V9 767 aa16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 SMUG1Q53HV7 270 aa16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 ATAD3BQ5T9A4 648 aa16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 LBX2Q6XYB7 198 aa16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 SLCO6A1Q86UG4 719 aa16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 ZCCHC7Q8N3Z6 543 aaKnown RBP16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 TXNDC5Q8NBS9 432 aaKnown RBP16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 CENPIQ92674 756 aaPredicted RBP16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 CDHR1Q96JP9 859 aa16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 OMDQ99983 421 aa16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 ING2Q9H160 280 aa16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 CASS4Q9NQ75 786 aa16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 TLR9Q9NR96 1032 aa16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 SPO11Q9Y5K1 396 aa16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 MAFBQ9Y5Q3 323 aaPredicted RBP16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 PSMD11O00231 422 aa16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 ARPC2O15144 300 aa16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 AP2A1O95782 977 aa16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 LDLRP01130 860 aa16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 GOT1P17174 413 aa16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 HTR1BP28222 390 aa16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 RGS7P49802 495 aa16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 ADAM17P78536 824 aa16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 SP2Q02086 613 aa16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 MAP1SQ66K74 1059 aaPredicted RBP16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 AKAP14Q86UN6 197 aa16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 PSTKQ8IV42 348 aaKnown RBP16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 CALML6Q8TD86 181 aa16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 HDAC11Q96DB2 347 aa16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 UBXN10Q96LJ8 280 aa16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 BCL7BQ9BQE9 202 aa16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 C11orf84Q9BUA3 381 aaPredicted RBP16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 MUC13Q9H3R2 512 aa16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 EML4Q9HC35 981 aaKnown RBP16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 HPS4Q9NQG7 708 aa16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 KIAA1257Q9ULG3 409 aa16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 NDUFAF1Q9Y375 327 aa16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 FIS1Q9Y3D6 152 aa16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 MYO18AQ92614 2054 aaKnown RBP16.59■□□□□ 0.25
CLPTM1-203ENST00000546079 MFSD11O43934 449 aa16.58■□□□□ 0.25
CLPTM1-203ENST00000546079 UMPSP11172 480 aa16.58■□□□□ 0.25
CLPTM1-203ENST00000546079 ATP5F1P24539 256 aaPredicted RBP16.58■□□□□ 0.25
CLPTM1-203ENST00000546079 SERPINB1P30740 379 aa16.58■□□□□ 0.25
CLPTM1-203ENST00000546079 PGGT1BP53609 377 aa16.58■□□□□ 0.25
CLPTM1-203ENST00000546079 PID1Q7Z2X4 250 aa16.58■□□□□ 0.25
CLPTM1-203ENST00000546079 R3HCC1LQ7Z5L2 792 aaKnown RBP16.58■□□□□ 0.25
CLPTM1-203ENST00000546079 SLC22A16Q86VW1 577 aa16.58■□□□□ 0.25
CLPTM1-203ENST00000546079 ARMC8Q8IUR7 673 aa16.58■□□□□ 0.25
CLPTM1-203ENST00000546079 SCML4Q8N228 414 aa16.58■□□□□ 0.25
CLPTM1-203ENST00000546079 DNAAF3Q8N9W5 541 aa16.58■□□□□ 0.25
CLPTM1-203ENST00000546079 CHST13Q8NET6 341 aa16.58■□□□□ 0.25
CLPTM1-203ENST00000546079 NXNL1Q96CM4 212 aa16.58■□□□□ 0.25
CLPTM1-203ENST00000546079 ZNF486Q96H40 463 aaPredicted RBP16.58■□□□□ 0.25
CLPTM1-203ENST00000546079 LRCH3Q96II8 777 aa16.58■□□□□ 0.25
CLPTM1-203ENST00000546079 YME1L1Q96TA2 773 aa16.58■□□□□ 0.25
CLPTM1-203ENST00000546079 MRPL57Q9BQC6 102 aaKnown RBP16.58■□□□□ 0.25
CLPTM1-203ENST00000546079 NIFKQ9BYG3 293 aaKnown RBP16.58■□□□□ 0.25
CLPTM1-203ENST00000546079 POMKQ9H5K3 350 aa16.58■□□□□ 0.25
CLPTM1-203ENST00000546079 SP140LQ9H930 580 aa16.58■□□□□ 0.25
CLPTM1-203ENST00000546079 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.58■□□□□ 0.25
CLPTM1-203ENST00000546079 SEPT10Q9P0V9 454 aa16.58■□□□□ 0.25
CLPTM1-203ENST00000546079 DKK3Q9UBP4 350 aa16.58■□□□□ 0.25
CLPTM1-203ENST00000546079 ILVBLA1L0T0 632 aa16.58■□□□□ 0.24
CLPTM1-203ENST00000546079 ADM5C9JUS6 153 aa16.58■□□□□ 0.24
CLPTM1-203ENST00000546079 TNFRSF10AO00220 468 aa16.58■□□□□ 0.24
CLPTM1-203ENST00000546079 SLC22A1O15245 554 aa16.58■□□□□ 0.24
CLPTM1-203ENST00000546079 USP12O75317 370 aa16.58■□□□□ 0.24
CLPTM1-203ENST00000546079 FARP2O94887 1054 aaPredicted RBP16.58■□□□□ 0.24
CLPTM1-203ENST00000546079 SHMT2P34897 504 aa16.58■□□□□ 0.24
CLPTM1-203ENST00000546079 AVPR1AP37288 418 aa16.58■□□□□ 0.24
CLPTM1-203ENST00000546079 ARL4AP40617 200 aa16.58■□□□□ 0.24
CLPTM1-203ENST00000546079 POLD2P49005 469 aa16.58■□□□□ 0.24
CLPTM1-203ENST00000546079 STX1BP61266 288 aa16.58■□□□□ 0.24
CLPTM1-203ENST00000546079 ILF2Q12905 390 aaKnown RBP16.58■□□□□ 0.24
CLPTM1-203ENST00000546079 SLX4IPQ5VYV7 408 aa16.58■□□□□ 0.24
CLPTM1-203ENST00000546079 PMF1Q6P1K2 205 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms