RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 PAPSS2O95340 614 aaPredicted RBP8.78□□□□□ -1
TDP1-204ENST00000545686 MMP3P08254 477 aa8.78□□□□□ -1
TDP1-204ENST00000545686 ENTPD1P49961 510 aa8.78□□□□□ -1
TDP1-204ENST00000545686 CDH15P55291 814 aa8.78□□□□□ -1
TDP1-204ENST00000545686 PRAMEP78395 509 aa8.78□□□□□ -1
TDP1-204ENST00000545686 EN1Q05925 392 aaPredicted RBP8.78□□□□□ -1
TDP1-204ENST00000545686 ZNF792Q3KQV3 632 aa8.78□□□□□ -1
TDP1-204ENST00000545686 ZNF678Q5SXM1 525 aa8.78□□□□□ -1
TDP1-204ENST00000545686 RBM20Q5T481 1227 aaKnown RBP8.78□□□□□ -1
TDP1-204ENST00000545686 ABRAXAS1Q6UWZ7 409 aa8.78□□□□□ -1
TDP1-204ENST00000545686 RANBP10Q6VN20 620 aa8.78□□□□□ -1
TDP1-204ENST00000545686 BEND5Q7L4P6 421 aa8.78□□□□□ -1
TDP1-204ENST00000545686 FASTKD5Q7L8L6 764 aaKnown RBP8.78□□□□□ -1
TDP1-204ENST00000545686 ARHGAP12Q8IWW6 846 aa8.78□□□□□ -1
TDP1-204ENST00000545686 SCML4Q8N228 414 aa8.78□□□□□ -1
TDP1-204ENST00000545686 TMEM86AQ8N2M4 240 aa8.78□□□□□ -1
TDP1-204ENST00000545686 PIAS4Q8N2W9 510 aaPredicted RBP8.78□□□□□ -1
TDP1-204ENST00000545686 OR9I1Q8NGQ6 314 aa8.78□□□□□ -1
TDP1-204ENST00000545686 USP33Q8TEY7 942 aa8.78□□□□□ -1
TDP1-204ENST00000545686 TSPEARQ8WU66 669 aa8.78□□□□□ -1
TDP1-204ENST00000545686 OTUD5Q96G74 571 aa8.78□□□□□ -1
TDP1-204ENST00000545686 CELF6Q96J87 481 aaKnown RBP8.78□□□□□ -1
TDP1-204ENST00000545686 OLFM1Q99784 485 aa8.78□□□□□ -1
TDP1-204ENST00000545686 SMOQ99835 787 aa8.78□□□□□ -1
TDP1-204ENST00000545686 TUBA1CQ9BQE3 449 aa8.78□□□□□ -1
TDP1-204ENST00000545686 NPLQ9BXD5 320 aaPredicted RBP8.78□□□□□ -1
TDP1-204ENST00000545686 GOLGA2P5Q9HBQ8 144 aa8.78□□□□□ -1
TDP1-204ENST00000545686 ARNT2Q9HBZ2 717 aa8.78□□□□□ -1
TDP1-204ENST00000545686 CRTAC1Q9NQ79 661 aa8.78□□□□□ -1
TDP1-204ENST00000545686 GID8Q9NWU2 228 aa8.78□□□□□ -1
TDP1-204ENST00000545686 SLC2A6Q9UGQ3 507 aa8.78□□□□□ -1
TDP1-204ENST00000545686 EBF1Q9UH73 591 aa8.78□□□□□ -1
TDP1-204ENST00000545686 SMIM35A0A1B0GVV1 85 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 KANSL1LA0AUZ9 987 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 SAC3D1A6NKF1 404 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 DFFAO00273 331 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 ANGPT2O15123 496 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 MAFKO60675 156 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 FGF4P08620 206 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 ALDOCP09972 364 aaKnown RBP8.77□□□□□ -1.01
TDP1-204ENST00000545686 USP17L7P0C7H9 530 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 ZNF12P17014 697 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 YWHAQP27348 245 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 STT3AP46977 705 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 LHX1P48742 406 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 CD97P48960 835 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 MRPL19P49406 292 aaKnown RBP8.77□□□□□ -1.01
TDP1-204ENST00000545686 HERVK_113P63132 956 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 ZNF829Q3KNS6 432 aaPredicted RBP8.77□□□□□ -1.01
TDP1-204ENST00000545686 WSCD1Q658N2 575 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 LAYNQ6UX15 382 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 GPRIN1Q7Z2K8 1008 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 LYSMD3Q7Z3D4 306 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 ZNF467Q7Z7K2 595 aaPredicted RBP8.77□□□□□ -1.01
TDP1-204ENST00000545686 RETREG3Q86VR2 466 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 LRRC49Q8IUZ0 686 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 CLYBLQ8N0X4 340 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 MIER2Q8N344 545 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 ZMIZ2Q8NF64 920 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 RSPH1Q8WYR4 309 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 PHF12Q96QT6 1004 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 OSMRQ99650 979 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 ERVK-6Q9BXR3 956 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 TRIM54Q9BYV2 358 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 UNKQ9C0B0 810 aaKnown RBP8.77□□□□□ -1.01
TDP1-204ENST00000545686 KATNBL1Q9H079 304 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 CATSPERBQ9H7T0 1116 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 KLK14Q9P0G3 267 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 PIN4Q9Y237 131 aaKnown RBP8.77□□□□□ -1.01
TDP1-204ENST00000545686 SNX10Q9Y5X0 201 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 HHLA1C9JL84 531 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 H3BMQ9 156 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 FXYD1O00168 92 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 NR5A2O00482 541 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 UBFD1O14562 309 aaKnown RBP8.77□□□□□ -1.01
TDP1-204ENST00000545686 IGLV3-25P01717 112 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 GNAO1P09471 354 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 UMPSP11172 480 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 HOXB8P17481 243 aaPredicted RBP8.77□□□□□ -1.01
TDP1-204ENST00000545686 CAPGP40121 348 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 TMEM62Q0P6H9 643 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 C16orf72Q14CZ0 275 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 KIF19Q2TAC6 998 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 UGT3A2Q3SY77 523 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 UBXN11Q5T124 520 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 HECTD2Q5U5R9 776 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 KIAA0319Q5VV43 1072 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 ELMSAN1Q6PJG2 1045 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 TAC4Q86UU9 113 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 PTRH1Q86Y79 214 aaKnown RBP8.77□□□□□ -1.01
TDP1-204ENST00000545686 ADGRG5Q8IZF4 528 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 PAPD5Q8NDF8 572 aaKnown RBP8.77□□□□□ -1.01
TDP1-204ENST00000545686 TRPV3Q8NET8 790 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 GTF3C2Q8WUA4 911 aaPredicted RBP8.77□□□□□ -1.01
TDP1-204ENST00000545686 SMARCD1Q96GM5 515 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 ZNF419Q96HQ0 510 aaPredicted RBP8.77□□□□□ -1.01
TDP1-204ENST00000545686 MRGPRX2Q96LB1 330 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 COG8Q96MW5 612 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 SLC39A3Q9BRY0 314 aa8.77□□□□□ -1.01
TDP1-204ENST00000545686 FAM49AQ9H0Q0 323 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms