RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 KRT80Q6KB66 452 aa15.08■□□□□ 0
USP28-214ENST00000545540 ISCA2Q86U28 154 aa15.08■□□□□ 0
USP28-214ENST00000545540 ARHGAP18Q8N392 663 aa15.08■□□□□ 0
USP28-214ENST00000545540 IGSF8Q969P0 613 aa15.08■□□□□ 0
USP28-214ENST00000545540 PGAP3Q96FM1 320 aaPredicted RBP15.08■□□□□ 0
USP28-214ENST00000545540 ADAM2Q99965 735 aa15.08■□□□□ 0
USP28-214ENST00000545540 GSTO2Q9H4Y5 243 aa15.08■□□□□ 0
USP28-214ENST00000545540 Q9H521 79 aa15.08■□□□□ 0
USP28-214ENST00000545540 SLAMF8Q9P0V8 285 aa15.08■□□□□ 0
USP28-214ENST00000545540 COMMD3-BMI1R4GMX3 469 aa15.08■□□□□ 0
USP28-214ENST00000545540 NRP2O60462 931 aa15.08■□□□□ 0
USP28-214ENST00000545540 PAMP19021 973 aa15.08■□□□□ 0
USP28-214ENST00000545540 PRKAA2P54646 552 aa15.08■□□□□ 0
USP28-214ENST00000545540 IKBKEQ14164 716 aa15.08■□□□□ 0
USP28-214ENST00000545540 AAK1Q2M2I8 961 aa15.08■□□□□ 0
USP28-214ENST00000545540 SIRPB2Q5JXA9 342 aa15.08■□□□□ 0
USP28-214ENST00000545540 ZBTB49Q6ZSB9 765 aa15.08■□□□□ 0
USP28-214ENST00000545540 ZNF280BQ86YH2 543 aa15.08■□□□□ 0
USP28-214ENST00000545540 PELI3Q8N2H9 469 aa15.08■□□□□ 0
USP28-214ENST00000545540 FAM47BQ8NA70 645 aa15.08■□□□□ 0
USP28-214ENST00000545540 RNF217Q8TC41 542 aa15.08■□□□□ 0
USP28-214ENST00000545540 C1orf50Q9BV19 199 aa15.08■□□□□ 0
USP28-214ENST00000545540 SENP6Q9GZR1 1112 aaPredicted RBP15.08■□□□□ 0
USP28-214ENST00000545540 SP110Q9HB58 689 aa15.08■□□□□ 0
USP28-214ENST00000545540 ENTPD7Q9NQZ7 604 aa15.08■□□□□ 0
USP28-214ENST00000545540 DNAJC15Q9Y5T4 150 aa15.08■□□□□ 0
USP28-214ENST00000545540 PIP5K1BO14986 540 aa15.07■□□□□ 0
USP28-214ENST00000545540 MUSKO15146 869 aa15.07■□□□□ 0
USP28-214ENST00000545540 CDC42EP1Q00587 391 aa15.07■□□□□ 0
USP28-214ENST00000545540 MARC1Q5VT66 337 aa15.07■□□□□ 0
USP28-214ENST00000545540 POTEHQ6S545 545 aa15.07■□□□□ 0
USP28-214ENST00000545540 METTL23Q86XA0 190 aa15.07■□□□□ 0
USP28-214ENST00000545540 TICAM1Q8IUC6 712 aa15.07■□□□□ 0
USP28-214ENST00000545540 CILP2Q8IUL8 1156 aa15.07■□□□□ 0
USP28-214ENST00000545540 OFCC1Q8IZS5 231 aa15.07■□□□□ 0
USP28-214ENST00000545540 PGBD5Q8N414 524 aa15.07■□□□□ 0
USP28-214ENST00000545540 TUBGCP3Q96CW5 907 aa15.07■□□□□ 0
USP28-214ENST00000545540 ACOX2Q99424 681 aa15.07■□□□□ 0
USP28-214ENST00000545540 CCDC28BQ9BUN5 200 aa15.07■□□□□ 0
USP28-214ENST00000545540 CNOT6Q9ULM6 557 aaKnown RBP15.07■□□□□ 0
USP28-214ENST00000545540 PLXNB2O15031 1838 aa15.07■□□□□ 0
USP28-214ENST00000545540 ODC1P11926 461 aa15.07■□□□□ 0
USP28-214ENST00000545540 GFAPP14136 432 aa15.07■□□□□ 0
USP28-214ENST00000545540 SLC5A2P31639 672 aa15.07■□□□□ 0
USP28-214ENST00000545540 OR4D1Q15615 310 aa15.07■□□□□ 0
USP28-214ENST00000545540 RABL3Q5HYI8 236 aa15.07■□□□□ 0
USP28-214ENST00000545540 KLC3Q6P597 504 aa15.07■□□□□ 0
USP28-214ENST00000545540 EZH1Q92800 747 aaPredicted RBP15.07■□□□□ 0
USP28-214ENST00000545540 TEX37Q96LM6 180 aa15.07■□□□□ 0
USP28-214ENST00000545540 HAPLN3Q96S86 360 aa15.07■□□□□ 0
USP28-214ENST00000545540 DCUN1D5Q9BTE7 237 aa15.07■□□□□ 0
USP28-214ENST00000545540 CATSPERBQ9H7T0 1116 aa15.07■□□□□ 0
USP28-214ENST00000545540 SLC38A7Q9NVC3 462 aa15.07■□□□□ 0
USP28-214ENST00000545540 RHBDL2Q9NX52 303 aa15.07■□□□□ 0
USP28-214ENST00000545540 GALPQ9UBC7 116 aa15.07■□□□□ 0
USP28-214ENST00000545540 CROTQ9UKG9 612 aa15.07■□□□□ 0
USP28-214ENST00000545540 A0A0J9YYE9 177 aa15.07■□□□□ 0
USP28-214ENST00000545540 BAIAP3O94812 1187 aa15.07■□□□□ 0
USP28-214ENST00000545540 TNFAIP8O95379 198 aa15.07■□□□□ 0
USP28-214ENST00000545540 OXTRP30559 389 aa15.07■□□□□ 0
USP28-214ENST00000545540 PBX3P40426 434 aa15.07■□□□□ 0
USP28-214ENST00000545540 YAP1P46937 504 aaKnown RBP15.07■□□□□ 0
USP28-214ENST00000545540 AGTR2P50052 363 aa15.07■□□□□ 0
USP28-214ENST00000545540 POU4F1Q01851 419 aa15.07■□□□□ 0
USP28-214ENST00000545540 UNC50Q53HI1 259 aa15.07■□□□□ 0
USP28-214ENST00000545540 C6orf10Q5SRN2 563 aa15.07■□□□□ 0
USP28-214ENST00000545540 ZNF549Q6P9A3 640 aa15.07■□□□□ 0
USP28-214ENST00000545540 ZNF467Q7Z7K2 595 aaPredicted RBP15.07■□□□□ 0
USP28-214ENST00000545540 TMEM86AQ8N2M4 240 aa15.07■□□□□ 0
USP28-214ENST00000545540 NAT16Q8N8M0 369 aa15.07■□□□□ 0
USP28-214ENST00000545540 ADCY4Q8NFM4 1077 aa15.07■□□□□ 0
USP28-214ENST00000545540 ASB9Q96DX5 294 aa15.07■□□□□ 0
USP28-214ENST00000545540 TMEM74Q96NL1 305 aa15.07■□□□□ 0
USP28-214ENST00000545540 SEMA3CQ99985 751 aa15.07■□□□□ 0
USP28-214ENST00000545540 PREBQ9HCU5 417 aa15.07■□□□□ 0
USP28-214ENST00000545540 SPAG4Q9NPE6 437 aa15.07■□□□□ 0
USP28-214ENST00000545540 IKZF3Q9UKT9 509 aa15.07■□□□□ 0
USP28-214ENST00000545540 PTCH2Q9Y6C5 1203 aa15.07■□□□□ 0
USP28-214ENST00000545540 PDCD11Q14690 1871 aaKnown RBP15.06■□□□□ 0
USP28-214ENST00000545540 TSC2P49815 1807 aa15.06■□□□□ 0
USP28-214ENST00000545540 MAGEB3O15480 346 aa15.06■□□□□ 0
USP28-214ENST00000545540 NDST2P52849 883 aa15.06■□□□□ 0
USP28-214ENST00000545540 TRIM32Q13049 653 aa15.06■□□□□ 0
USP28-214ENST00000545540 CD300LGQ6UXG3 332 aa15.06■□□□□ 0
USP28-214ENST00000545540 CHSY3Q70JA7 882 aa15.06■□□□□ 0
USP28-214ENST00000545540 ARHGAP22Q7Z5H3 698 aa15.06■□□□□ 0
USP28-214ENST00000545540 CBR4Q8N4T8 237 aa15.06■□□□□ 0
USP28-214ENST00000545540 C19orf60Q96EN9 201 aa15.06■□□□□ 0
USP28-214ENST00000545540 CDK15Q96Q40 435 aa15.06■□□□□ 0
USP28-214ENST00000545540 UNC93B1Q9H1C4 597 aa15.06■□□□□ 0
USP28-214ENST00000545540 SARS2Q9NP81 518 aaKnown RBP15.06■□□□□ 0
USP28-214ENST00000545540 NSMCE4AQ9NXX6 385 aa15.06■□□□□ 0
USP28-214ENST00000545540 C5orf42Q9H799 3197 aa15.06■□□□□ 0
USP28-214ENST00000545540 SLCO1B7G3V0H7 640 aa15.06■□□□□ 0
USP28-214ENST00000545540 S1PR4O95977 384 aa15.06■□□□□ 0
USP28-214ENST00000545540 CAPN3P20807 821 aa15.06■□□□□ 0
USP28-214ENST00000545540 FMO4P31512 558 aa15.06■□□□□ 0
USP28-214ENST00000545540 CPT1AP50416 773 aa15.06■□□□□ 0
USP28-214ENST00000545540 AIF1P55008 147 aa15.06■□□□□ 0
USP28-214ENST00000545540 PFKPQ01813 784 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms