RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 NTAN1Q96AB6 310 aa14.78□□□□□ -0.04
RTN3-214ENST00000545432 ECHDC3Q96DC8 303 aa14.78□□□□□ -0.04
RTN3-214ENST00000545432 TBC1D31Q96DN5 1066 aa14.78□□□□□ -0.04
RTN3-214ENST00000545432 TEFMQ96QE5 360 aaKnown RBP14.78□□□□□ -0.04
RTN3-214ENST00000545432 TUBGCP5Q96RT8 1024 aa14.78□□□□□ -0.04
RTN3-214ENST00000545432 EFHD1Q9BUP0 239 aa14.78□□□□□ -0.04
RTN3-214ENST00000545432 LGR4Q9BXB1 951 aa14.78□□□□□ -0.04
RTN3-214ENST00000545432 ZNF71Q9NQZ8 489 aaPredicted RBP14.78□□□□□ -0.04
RTN3-214ENST00000545432 TRNAU1APQ9NX07 287 aaKnown RBP14.78□□□□□ -0.04
RTN3-214ENST00000545432 DNAJC12Q9UKB3 198 aa14.78□□□□□ -0.04
RTN3-214ENST00000545432 ATP8A1Q9Y2Q0 1164 aa14.78□□□□□ -0.04
RTN3-214ENST00000545432 RP1L1Q8IWN7 2480 aaPredicted RBP14.77□□□□□ -0.04
RTN3-214ENST00000545432 PRSS38A1L453 326 aa14.77□□□□□ -0.05
RTN3-214ENST00000545432 B4DGG1 531 aa14.77□□□□□ -0.05
RTN3-214ENST00000545432 PIGNO95427 931 aa14.77□□□□□ -0.05
RTN3-214ENST00000545432 FGFR1OPO95684 399 aaKnown RBP14.77□□□□□ -0.05
RTN3-214ENST00000545432 PLEKP08567 350 aaPredicted RBP14.77□□□□□ -0.05
RTN3-214ENST00000545432 CYP11B1P15538 503 aa14.77□□□□□ -0.05
RTN3-214ENST00000545432 XPAP23025 273 aaPredicted RBP14.77□□□□□ -0.05
RTN3-214ENST00000545432 MAP4P27816 1152 aaKnown RBP14.77□□□□□ -0.05
RTN3-214ENST00000545432 STX17P56962 302 aa14.77□□□□□ -0.05
RTN3-214ENST00000545432 RAB15P59190 212 aa14.77□□□□□ -0.05
RTN3-214ENST00000545432 KLRB1Q12918 225 aa14.77□□□□□ -0.05
RTN3-214ENST00000545432 PAK1Q13153 545 aa14.77□□□□□ -0.05
RTN3-214ENST00000545432 AMZ1Q400G9 498 aa14.77□□□□□ -0.05
RTN3-214ENST00000545432 RWDD4Q6NW29 188 aaKnown RBP14.77□□□□□ -0.05
RTN3-214ENST00000545432 STRADAQ7RTN6 431 aa14.77□□□□□ -0.05
RTN3-214ENST00000545432 UMODL1-AS1Q8N2C9 162 aa14.77□□□□□ -0.05
RTN3-214ENST00000545432 RTL3Q8N8U3 475 aaKnown RBP14.77□□□□□ -0.05
RTN3-214ENST00000545432 CCDC112Q8NEF3 446 aa14.77□□□□□ -0.05
RTN3-214ENST00000545432 SPOCK2Q92563 424 aa14.77□□□□□ -0.05
RTN3-214ENST00000545432 LRRC4CQ9HCJ2 640 aa14.77□□□□□ -0.05
RTN3-214ENST00000545432 CYP4F12Q9HCS2 524 aa14.77□□□□□ -0.05
RTN3-214ENST00000545432 OCIAD1Q9NX40 245 aa14.77□□□□□ -0.05
RTN3-214ENST00000545432 CTNND2Q9UQB3 1225 aa14.77□□□□□ -0.05
RTN3-214ENST00000545432 ST14Q9Y5Y6 855 aa14.77□□□□□ -0.05
RTN3-214ENST00000545432 IGHV1OR21-1A0A087WYE8 117 aa14.76□□□□□ -0.05
RTN3-214ENST00000545432 LOC101059948A0A1B0GTJ6 334 aa14.76□□□□□ -0.05
RTN3-214ENST00000545432 PDE2AO00408 941 aaPredicted RBP14.76□□□□□ -0.05
RTN3-214ENST00000545432 PPM1DO15297 605 aa14.76□□□□□ -0.05
RTN3-214ENST00000545432 DUX1O43812 170 aa14.76□□□□□ -0.05
RTN3-214ENST00000545432 PNMA6AP0CW24 399 aaPredicted RBP14.76□□□□□ -0.05
RTN3-214ENST00000545432 ALDH4A1P30038 563 aa14.76□□□□□ -0.05
RTN3-214ENST00000545432 PTPN9P43378 593 aa14.76□□□□□ -0.05
RTN3-214ENST00000545432 ATP11AP98196 1134 aa14.76□□□□□ -0.05
RTN3-214ENST00000545432 ABHD18Q0P651 414 aa14.76□□□□□ -0.05
RTN3-214ENST00000545432 CDC20Q12834 499 aa14.76□□□□□ -0.05
RTN3-214ENST00000545432 DCAF12Q5T6F0 453 aa14.76□□□□□ -0.05
RTN3-214ENST00000545432 PNCKQ6P2M8 343 aa14.76□□□□□ -0.05
RTN3-214ENST00000545432 TMEM71Q6P5X7 295 aa14.76□□□□□ -0.05
RTN3-214ENST00000545432 TIPARPQ7Z3E1 657 aaKnown RBP14.76□□□□□ -0.05
RTN3-214ENST00000545432 ARHGAP22Q7Z5H3 698 aa14.76□□□□□ -0.05
RTN3-214ENST00000545432 NAGSQ8N159 534 aa14.76□□□□□ -0.05
RTN3-214ENST00000545432 PELI3Q8N2H9 469 aa14.76□□□□□ -0.05
RTN3-214ENST00000545432 NETO2Q8NC67 525 aa14.76□□□□□ -0.05
RTN3-214ENST00000545432 ZDHHC1Q8WTX9 485 aa14.76□□□□□ -0.05
RTN3-214ENST00000545432 RTP4Q96DX8 246 aa14.76□□□□□ -0.05
RTN3-214ENST00000545432 PDFQ9HBH1 243 aa14.76□□□□□ -0.05
RTN3-214ENST00000545432 SLC39A1Q9NY26 324 aa14.76□□□□□ -0.05
RTN3-214ENST00000545432 TAAR2Q9P1P5 351 aa14.76□□□□□ -0.05
RTN3-214ENST00000545432 PLEKHB1Q9UF11 243 aaPredicted RBP14.76□□□□□ -0.05
RTN3-214ENST00000545432 TMEM184BQ9Y519 407 aaPredicted RBP14.76□□□□□ -0.05
RTN3-214ENST00000545432 C2CD4BA6NLJ0 364 aa14.75□□□□□ -0.05
RTN3-214ENST00000545432 RHPN2P1A8MT19 583 aa14.75□□□□□ -0.05
RTN3-214ENST00000545432 MTSS1O43312 755 aa14.75□□□□□ -0.05
RTN3-214ENST00000545432 ECEL1O95672 775 aa14.75□□□□□ -0.05
RTN3-214ENST00000545432 CEACAM5P06731 702 aa14.75□□□□□ -0.05
RTN3-214ENST00000545432 OAS2P29728 719 aaKnown RBP14.75□□□□□ -0.05
RTN3-214ENST00000545432 CSF2RBP32927 897 aa14.75□□□□□ -0.05
RTN3-214ENST00000545432 CSTF2P33240 577 aaKnown RBP eCLIP14.75□□□□□ -0.05
RTN3-214ENST00000545432 HDAC4P56524 1084 aa14.75□□□□□ -0.05
RTN3-214ENST00000545432 NOMO3P69849 1222 aa14.75□□□□□ -0.05
RTN3-214ENST00000545432 MC2RQ01718 297 aa14.75□□□□□ -0.05
RTN3-214ENST00000545432 PARP15Q460N3 678 aa14.75□□□□□ -0.05
RTN3-214ENST00000545432 LACTB2Q53H82 288 aaPredicted RBP14.75□□□□□ -0.05
RTN3-214ENST00000545432 C2CD6Q53TS8 623 aa14.75□□□□□ -0.05
RTN3-214ENST00000545432 TCTN3Q6NUS6 607 aa14.75□□□□□ -0.05
RTN3-214ENST00000545432 DPPA4Q7L190 304 aa14.75□□□□□ -0.05
RTN3-214ENST00000545432 NLGN4XQ8N0W4 816 aa14.75□□□□□ -0.05
RTN3-214ENST00000545432 EMC1Q8N766 993 aa14.75□□□□□ -0.05
RTN3-214ENST00000545432 NLGN4YQ8NFZ3 816 aaPredicted RBP14.75□□□□□ -0.05
RTN3-214ENST00000545432 RXFP2Q8WXD0 754 aa14.75□□□□□ -0.05
RTN3-214ENST00000545432 SCARF2Q96GP6 870 aaPredicted RBP14.75□□□□□ -0.05
RTN3-214ENST00000545432 ZPBPQ9BS86 351 aa14.75□□□□□ -0.05
RTN3-214ENST00000545432 TEX101Q9BY14 249 aa14.75□□□□□ -0.05
RTN3-214ENST00000545432 GSDMCQ9BYG8 508 aa14.75□□□□□ -0.05
RTN3-214ENST00000545432 FBXO8Q9NRD0 319 aa14.75□□□□□ -0.05
RTN3-214ENST00000545432 PRR19A6NJB7 356 aa14.74□□□□□ -0.05
RTN3-214ENST00000545432 RASA4BC9J798 803 aa14.74□□□□□ -0.05
RTN3-214ENST00000545432 GOLGA8SH3BPF8 625 aa14.74□□□□□ -0.05
RTN3-214ENST00000545432 TRAFD1O14545 582 aaPredicted RBP14.74□□□□□ -0.05
RTN3-214ENST00000545432 RASA4O43374 803 aa14.74□□□□□ -0.05
RTN3-214ENST00000545432 MYCLP1P12525 358 aaPredicted RBP14.74□□□□□ -0.05
RTN3-214ENST00000545432 TEAD1P28347 426 aa14.74□□□□□ -0.05
RTN3-214ENST00000545432 GPLD1P80108 840 aa14.74□□□□□ -0.05
RTN3-214ENST00000545432 MC1RQ01726 317 aa14.74□□□□□ -0.05
RTN3-214ENST00000545432 RAPGEF1Q13905 1077 aa14.74□□□□□ -0.05
RTN3-214ENST00000545432 C15orf59Q2T9L4 293 aaPredicted RBP14.74□□□□□ -0.05
RTN3-214ENST00000545432 ATCAYQ86WG3 371 aa14.74□□□□□ -0.05
RTN3-214ENST00000545432 CAMK1DQ8IU85 385 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms