RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 RWDD2AQ9UIY3 292 aa6.9□□□□□ -1.3
LDHA-223ENST00000545215 TLK1Q9UKI8 766 aa6.9□□□□□ -1.3
LDHA-223ENST00000545215 UBQLN1Q9UMX0 589 aaKnown RBP6.9□□□□□ -1.3
LDHA-223ENST00000545215 DIDO1Q9BTC0 2240 aaKnown RBP6.9□□□□□ -1.31
LDHA-223ENST00000545215 TLN2Q9Y4G6 2542 aa6.89□□□□□ -1.31
LDHA-223ENST00000545215 CKAP5Q14008 2032 aa6.89□□□□□ -1.31
LDHA-223ENST00000545215 A0A0B4J269 797 aa6.89□□□□□ -1.31
LDHA-223ENST00000545215 TTC26A0AVF1 554 aa6.89□□□□□ -1.31
LDHA-223ENST00000545215 TMEM82A0PJX8 343 aa6.89□□□□□ -1.31
LDHA-223ENST00000545215 SYCE3A1L190 88 aa6.89□□□□□ -1.31
LDHA-223ENST00000545215 SMTNL1A8MU46 457 aa6.89□□□□□ -1.31
LDHA-223ENST00000545215 K7ESM1 405 aa6.89□□□□□ -1.31
LDHA-223ENST00000545215 SCAMP1O15126 338 aa6.89□□□□□ -1.31
LDHA-223ENST00000545215 CETN3O15182 167 aa6.89□□□□□ -1.31
LDHA-223ENST00000545215 OGTO15294 1046 aa6.89□□□□□ -1.31
LDHA-223ENST00000545215 CACNG3O60359 315 aa6.89□□□□□ -1.31
LDHA-223ENST00000545215 MAGEC1O60732 1142 aa6.89□□□□□ -1.31
LDHA-223ENST00000545215 PRPF6O94906 941 aaKnown RBP6.89□□□□□ -1.31
LDHA-223ENST00000545215 CISD3P0C7P0 127 aa6.89□□□□□ -1.31
LDHA-223ENST00000545215 MYBL2P10244 700 aa6.89□□□□□ -1.31
LDHA-223ENST00000545215 ENDOUP21128 410 aaKnown RBP6.89□□□□□ -1.31
LDHA-223ENST00000545215 LRPAP1P30533 357 aa6.89□□□□□ -1.31
LDHA-223ENST00000545215 ETV5P41161 510 aa6.89□□□□□ -1.31
LDHA-223ENST00000545215 GPR15P49685 360 aa6.89□□□□□ -1.31
LDHA-223ENST00000545215 CASP5P51878 434 aa6.89□□□□□ -1.31
LDHA-223ENST00000545215 GALCP54803 685 aa6.89□□□□□ -1.31
LDHA-223ENST00000545215 TPM4P67936 248 aa6.89□□□□□ -1.31
LDHA-223ENST00000545215 ZBTB16Q05516 673 aa6.89□□□□□ -1.31
LDHA-223ENST00000545215 OVGP1Q12889 678 aa6.89□□□□□ -1.31
LDHA-223ENST00000545215 LSAMPQ13449 338 aa6.89□□□□□ -1.31
LDHA-223ENST00000545215 SURF1Q15526 300 aa6.89□□□□□ -1.31
LDHA-223ENST00000545215 ZCWPW2Q504Y3 356 aa6.89□□□□□ -1.31
LDHA-223ENST00000545215 VWA2Q5GFL6 755 aa6.89□□□□□ -1.31
LDHA-223ENST00000545215 CDKAL1Q5VV42 579 aa6.89□□□□□ -1.31
LDHA-223ENST00000545215 CXorf57Q6NSI4 855 aaKnown RBP6.89□□□□□ -1.31
LDHA-223ENST00000545215 DSTYKQ6XUX3 929 aa6.89□□□□□ -1.31
LDHA-223ENST00000545215 THAP5Q7Z6K1 395 aa6.89□□□□□ -1.31
LDHA-223ENST00000545215 IQCHQ86VS3 1027 aa6.89□□□□□ -1.31
LDHA-223ENST00000545215 CD302Q8IX05 232 aa6.89□□□□□ -1.31
LDHA-223ENST00000545215 ADGRF2Q8IZF7 708 aa6.89□□□□□ -1.31
LDHA-223ENST00000545215 OR2T3Q8NH03 318 aa6.89□□□□□ -1.31
LDHA-223ENST00000545215 POMGNT1Q8WZA1 660 aa6.89□□□□□ -1.31
LDHA-223ENST00000545215 ERCC4Q92889 916 aaPredicted RBP6.89□□□□□ -1.31
LDHA-223ENST00000545215 TRIM44Q96DX7 344 aaPredicted RBP6.89□□□□□ -1.31
LDHA-223ENST00000545215 CDADC1Q9BWV3 514 aa6.89□□□□□ -1.31
LDHA-223ENST00000545215 KCTD10Q9H3F6 313 aa6.89□□□□□ -1.31
LDHA-223ENST00000545215 AGPAT3Q9NRZ7 376 aa6.89□□□□□ -1.31
LDHA-223ENST00000545215 FRMD4BQ9Y2L6 1034 aa6.89□□□□□ -1.31
LDHA-223ENST00000545215 LUC7L2Q9Y383 392 aaKnown RBP6.89□□□□□ -1.31
LDHA-223ENST00000545215 LOXL2Q9Y4K0 774 aa6.89□□□□□ -1.31
LDHA-223ENST00000545215 CPQQ9Y646 472 aa6.89□□□□□ -1.31
LDHA-223ENST00000545215 SSU72P8A0A1W2PR75 194 aa6.88□□□□□ -1.31
LDHA-223ENST00000545215 C7orf72A4D263 438 aa6.88□□□□□ -1.31
LDHA-223ENST00000545215 GOLGA6CA6NDK9 693 aa6.88□□□□□ -1.31
LDHA-223ENST00000545215 GOLGA6BA6NDN3 693 aa6.88□□□□□ -1.31
LDHA-223ENST00000545215 NEMP2A6NFY4 417 aa6.88□□□□□ -1.31
LDHA-223ENST00000545215 FAM47DPA6NHR8 397 aa6.88□□□□□ -1.31
LDHA-223ENST00000545215 LACTBL1A8MY62 500 aa6.88□□□□□ -1.31
LDHA-223ENST00000545215 ZNF561-AS1K7EIQ3 104 aa6.88□□□□□ -1.31
LDHA-223ENST00000545215 IKBKBO14920 756 aa6.88□□□□□ -1.31
LDHA-223ENST00000545215 SLC16A3O15427 465 aaKnown RBP6.88□□□□□ -1.31
LDHA-223ENST00000545215 KCNN4O15554 427 aa6.88□□□□□ -1.31
LDHA-223ENST00000545215 TGFB1I1O43294 461 aa6.88□□□□□ -1.31
LDHA-223ENST00000545215 PIAS2O75928 621 aa6.88□□□□□ -1.31
LDHA-223ENST00000545215 NR3C1P04150 777 aa6.88□□□□□ -1.31
LDHA-223ENST00000545215 GOLGA6DP0CG33 693 aa6.88□□□□□ -1.31
LDHA-223ENST00000545215 CYP3A5P20815 502 aa6.88□□□□□ -1.31
LDHA-223ENST00000545215 HTR1EP28566 365 aa6.88□□□□□ -1.31
LDHA-223ENST00000545215 CCKBRP32239 447 aa6.88□□□□□ -1.31
LDHA-223ENST00000545215 RBMXP38159 391 aaKnown RBP6.88□□□□□ -1.31
LDHA-223ENST00000545215 BCL6P41182 706 aa6.88□□□□□ -1.31
LDHA-223ENST00000545215 CCR5P51681 352 aa6.88□□□□□ -1.31
LDHA-223ENST00000545215 COPB1P53618 953 aaKnown RBP6.88□□□□□ -1.31
LDHA-223ENST00000545215 IST1P53990 364 aa6.88□□□□□ -1.31
LDHA-223ENST00000545215 CDH8P55286 799 aa6.88□□□□□ -1.31
LDHA-223ENST00000545215 RPL11P62913 178 aaKnown RBP6.88□□□□□ -1.31
LDHA-223ENST00000545215 MYL5Q02045 173 aa6.88□□□□□ -1.31
LDHA-223ENST00000545215 TLE4Q04727 773 aa6.88□□□□□ -1.31
LDHA-223ENST00000545215 TPD52L1Q16890 204 aaPredicted RBP6.88□□□□□ -1.31
LDHA-223ENST00000545215 DPCR1Q3MIW9 517 aa6.88□□□□□ -1.31
LDHA-223ENST00000545215 SDHAF4Q5VUM1 108 aa6.88□□□□□ -1.31
LDHA-223ENST00000545215 SPATA1Q5VX52 437 aa6.88□□□□□ -1.31
LDHA-223ENST00000545215 NAPEPLDQ6IQ20 393 aa6.88□□□□□ -1.31
LDHA-223ENST00000545215 CYP2R1Q6VVX0 501 aa6.88□□□□□ -1.31
LDHA-223ENST00000545215 NELFCDQ8IXH7 590 aa6.88□□□□□ -1.31
LDHA-223ENST00000545215 ZC3H3Q8IXZ2 948 aaKnown RBP6.88□□□□□ -1.31
LDHA-223ENST00000545215 CNPY4Q8N129 248 aa6.88□□□□□ -1.31
LDHA-223ENST00000545215 GPD1LQ8N335 351 aa6.88□□□□□ -1.31
LDHA-223ENST00000545215 CSGALNACT2Q8N6G5 542 aa6.88□□□□□ -1.31
LDHA-223ENST00000545215 Q8NA96 180 aa6.88□□□□□ -1.31
LDHA-223ENST00000545215 XXYLT1Q8NBI6 393 aa6.88□□□□□ -1.31
LDHA-223ENST00000545215 ANKRD20A12PQ8NF67 263 aa6.88□□□□□ -1.31
LDHA-223ENST00000545215 NELFBQ8WX92 580 aa6.88□□□□□ -1.31
LDHA-223ENST00000545215 TMEM159Q96B96 161 aa6.88□□□□□ -1.31
LDHA-223ENST00000545215 SCARF2Q96GP6 870 aaPredicted RBP6.88□□□□□ -1.31
LDHA-223ENST00000545215 SLC39A13Q96H72 371 aa6.88□□□□□ -1.31
LDHA-223ENST00000545215 SCYL1Q96KG9 808 aa6.88□□□□□ -1.31
LDHA-223ENST00000545215 XPO6Q96QU8 1125 aaKnown RBP6.88□□□□□ -1.31
LDHA-223ENST00000545215 MSTO1Q9BUK6 570 aa6.88□□□□□ -1.31
LDHA-223ENST00000545215 HAPLN2Q9GZV7 340 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms