RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 DEPDC1Q5TB30 811 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 ESRP1Q6NXG1 681 aaKnown RBP5.8□□□□□ -1.48
VPS50-220ENST00000544910 HEXDCQ8WVB3 486 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 C19orf60Q96EN9 201 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 ACOX2Q99424 681 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 TRMOQ9BU70 441 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 THUMPD3Q9BV44 507 aaKnown RBP5.8□□□□□ -1.48
VPS50-220ENST00000544910 GATA5Q9BWX5 397 aaPredicted RBP5.8□□□□□ -1.48
VPS50-220ENST00000544910 FTHL17Q9BXU8 183 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 TRAF6Q9Y4K3 522 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 TCRBV5S1A1TA0A578 114 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 AZIN1O14977 448 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 TRIM24O15164 1050 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 EFCAB14O75071 495 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 LRG1P02750 347 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 SLC2A4P14672 509 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 ZNF7P17097 686 aaPredicted RBP5.8□□□□□ -1.48
VPS50-220ENST00000544910 GRK4P32298 578 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 IL2P60568 153 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 ATP6V0D1P61421 351 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 CHRNB3Q05901 458 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 CYP51A1Q16850 503 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 TIGD5Q53EQ6 642 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 KIAA0930Q6ICG6 404 aaPredicted RBP5.8□□□□□ -1.48
VPS50-220ENST00000544910 CLYBLQ8N0X4 340 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 FSTL5Q8N475 847 aaPredicted RBP5.8□□□□□ -1.48
VPS50-220ENST00000544910 FLCNQ8NFG4 579 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 KCNN1Q92952 543 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 ZNF395Q9H8N7 513 aaPredicted RBP5.8□□□□□ -1.48
VPS50-220ENST00000544910 GNPTGQ9UJJ9 305 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 FAM50BQ9Y247 325 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 SH3GLB1Q9Y371 365 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 NPEPPSL1A6NEC2 478 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 BUD23O43709 281 aaKnown RBP5.8□□□□□ -1.48
VPS50-220ENST00000544910 KATNA1O75449 491 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 GUCA1CO95843 209 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 HLA-DQB2P05538 268 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 F7P08709 466 aaPredicted RBP5.8□□□□□ -1.48
VPS50-220ENST00000544910 IDO1P14902 403 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 TSPAN8P19075 237 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 GNAZP19086 355 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 CES1P23141 567 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 TUFMP49411 452 aaKnown RBP5.8□□□□□ -1.48
VPS50-220ENST00000544910 TTPAP49638 278 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 DSC2Q02487 901 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 NR6A1Q15406 480 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 CCDC85BQ15834 202 aaPredicted RBP5.8□□□□□ -1.48
VPS50-220ENST00000544910 NRF1Q16656 503 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 PGS1Q32NB8 556 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 ELMSAN1Q6PJG2 1045 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 MAMDC4Q6UXC1 1216 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 KIAA0408Q6ZU52 694 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 ITIH5Q86UX2 942 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 DENND1CQ8IV53 801 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 DENND6AQ8IWF6 608 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 FAM9CQ8IZT9 166 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 ARRDC4Q8NCT1 418 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 ST13P5Q8NFI4 369 aaPredicted RBP5.8□□□□□ -1.48
VPS50-220ENST00000544910 ADCY4Q8NFM4 1077 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 GPR152Q8TDT2 470 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 CENPIQ92674 756 aaPredicted RBP5.8□□□□□ -1.48
VPS50-220ENST00000544910 FOPNLQ96NB1 174 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 LENG8Q96PV6 779 aaPredicted RBP5.8□□□□□ -1.48
VPS50-220ENST00000544910 ZBED2Q9BTP6 218 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 GRIP2Q9C0E4 1043 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 GPBP1L1Q9HC44 474 aaPredicted RBP5.8□□□□□ -1.48
VPS50-220ENST00000544910 HMG20AQ9NP66 347 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 BTRCQ9Y297 605 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 SLC27A5Q9Y2P5 690 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 AP4B1Q9Y6B7 739 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 ATAD5Q96QE3 1844 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 C15orf38-AP3S2A0A0A6YYH1 394 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 KCNU1A8MYU2 1149 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 DCLK1O15075 740 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 IRAK2O43187 625 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 RGS14O43566 566 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 ALDH1A2O94788 518 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 ENDOD1O94919 500 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 TOP3BO95985 862 aaKnown RBP5.8□□□□□ -1.48
VPS50-220ENST00000544910 CHRNGP07510 517 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 LINC00032P0C843 101 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 CHRNA4P43681 627 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 OLIG2Q13516 323 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 DMC1Q14565 340 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 DLG2Q15700 870 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 CCL14Q16627 93 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 TAZQ16635 292 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 SPATA19Q7Z5L4 167 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 ARPINQ7Z6K5 226 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 KBTBD7Q8WVZ9 684 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 C17orf50Q8WW18 174 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 ZFYVE19Q96K21 471 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 FCRL3Q96P31 734 aaPredicted RBP5.8□□□□□ -1.48
VPS50-220ENST00000544910 SMOQ99835 787 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 OSBPL11Q9BXB4 747 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 ZNF358Q9NW07 568 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 MOCS1Q9NZB8 636 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 GTF2IRD1Q9UHL9 959 aa5.8□□□□□ -1.48
VPS50-220ENST00000544910 TNPO3Q9Y5L0 923 aaKnown RBP5.8□□□□□ -1.48
VPS50-220ENST00000544910 FAM189A1O60320 539 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms