RNA–Protein interactions for RNA: ENST00000544907.6

TNFAIP1-202, Transcript of TNF alpha induced protein 1, humanhuman

TSL 2 BASIC

Gene TNFAIP1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-202ENST00000544907 ARSDP51689 593 aa18.09■□□□□ 0.49
TNFAIP1-202ENST00000544907 IRX1P78414 480 aaPredicted RBP18.09■□□□□ 0.49
TNFAIP1-202ENST00000544907 KLC1Q07866 573 aa18.09■□□□□ 0.49
TNFAIP1-202ENST00000544907 ZNF789Q5FWF6 425 aa18.09■□□□□ 0.49
TNFAIP1-202ENST00000544907 PTAR1Q7Z6K3 402 aaPredicted RBP18.09■□□□□ 0.49
TNFAIP1-202ENST00000544907 SDCCAG8Q86SQ7 713 aaPredicted RBP18.09■□□□□ 0.49
TNFAIP1-202ENST00000544907 MFN1Q8IWA4 741 aa18.09■□□□□ 0.49
TNFAIP1-202ENST00000544907 RNF168Q8IYW5 571 aaPredicted RBP18.09■□□□□ 0.49
TNFAIP1-202ENST00000544907 LGI2Q8N0V4 545 aa18.09■□□□□ 0.49
TNFAIP1-202ENST00000544907 PELI3Q8N2H9 469 aa18.09■□□□□ 0.49
TNFAIP1-202ENST00000544907 CCNYL1Q8N7R7 359 aa18.09■□□□□ 0.49
TNFAIP1-202ENST00000544907 FBXO22Q8NEZ5 403 aa18.09■□□□□ 0.49
TNFAIP1-202ENST00000544907 MYRFLQ96LU7 910 aa18.09■□□□□ 0.49
TNFAIP1-202ENST00000544907 TCF12Q99081 682 aa18.09■□□□□ 0.49
TNFAIP1-202ENST00000544907 UTP6Q9NYH9 597 aaKnown RBP18.09■□□□□ 0.49
TNFAIP1-202ENST00000544907 LOC100653049A0A140TA62 436 aa18.09■□□□□ 0.49
TNFAIP1-202ENST00000544907 H3BNC9 293 aa18.09■□□□□ 0.49
TNFAIP1-202ENST00000544907 SDHDO14521 159 aa18.09■□□□□ 0.49
TNFAIP1-202ENST00000544907 CD3EAPO15446 510 aaKnown RBP18.09■□□□□ 0.49
TNFAIP1-202ENST00000544907 KRT34O76011 436 aa18.09■□□□□ 0.49
TNFAIP1-202ENST00000544907 CXCL10P02778 98 aa18.09■□□□□ 0.49
TNFAIP1-202ENST00000544907 PPP3CCP48454 512 aa18.09■□□□□ 0.49
TNFAIP1-202ENST00000544907 SESN3P58005 492 aa18.09■□□□□ 0.49
TNFAIP1-202ENST00000544907 SULT2A1Q06520 285 aa18.09■□□□□ 0.49
TNFAIP1-202ENST00000544907 MAPRE2Q15555 327 aa18.09■□□□□ 0.49
TNFAIP1-202ENST00000544907 USP41Q3LFD5 358 aa18.09■□□□□ 0.49
TNFAIP1-202ENST00000544907 ZNF783Q6ZMS7 281 aa18.09■□□□□ 0.49
TNFAIP1-202ENST00000544907 C7orf61Q8IZ16 206 aa18.09■□□□□ 0.49
TNFAIP1-202ENST00000544907 PGAM4Q8N0Y7 254 aa18.09■□□□□ 0.49
TNFAIP1-202ENST00000544907 NDNQ99608 321 aa18.09■□□□□ 0.49
TNFAIP1-202ENST00000544907 DDX50Q9BQ39 737 aaKnown RBP18.09■□□□□ 0.49
TNFAIP1-202ENST00000544907 EFCAB1Q9HAE3 211 aa18.09■□□□□ 0.49
TNFAIP1-202ENST00000544907 TMEM39AQ9NV64 488 aa18.09■□□□□ 0.49
TNFAIP1-202ENST00000544907 VPS9D1Q9Y2B5 631 aa18.09■□□□□ 0.49
TNFAIP1-202ENST00000544907 ZNF840PA6NDX5 716 aa18.08■□□□□ 0.48
TNFAIP1-202ENST00000544907 LATS1O95835 1130 aa18.08■□□□□ 0.48
TNFAIP1-202ENST00000544907 HMBSP08397 361 aa18.08■□□□□ 0.48
TNFAIP1-202ENST00000544907 CR2P20023 1033 aa18.08■□□□□ 0.48
TNFAIP1-202ENST00000544907 CD9P21926 228 aa18.08■□□□□ 0.48
TNFAIP1-202ENST00000544907 RPL26P61254 145 aaKnown RBP18.08■□□□□ 0.48
TNFAIP1-202ENST00000544907 HECTD3Q5T447 861 aa18.08■□□□□ 0.48
TNFAIP1-202ENST00000544907 ISCA2Q86U28 154 aa18.08■□□□□ 0.48
TNFAIP1-202ENST00000544907 TMEM126BQ8IUX1 230 aa18.08■□□□□ 0.48
TNFAIP1-202ENST00000544907 OR4L1Q8NH43 312 aa18.08■□□□□ 0.48
TNFAIP1-202ENST00000544907 B3GALT6Q96L58 329 aa18.08■□□□□ 0.48
TNFAIP1-202ENST00000544907 MRPL40Q9NQ50 206 aaKnown RBP18.08■□□□□ 0.48
TNFAIP1-202ENST00000544907 NLE1Q9NVX2 485 aaPredicted RBP18.08■□□□□ 0.48
TNFAIP1-202ENST00000544907 ZDHHC7Q9NXF8 308 aa18.08■□□□□ 0.48
TNFAIP1-202ENST00000544907 UBA2Q9UBT2 640 aaPredicted RBP18.08■□□□□ 0.48
TNFAIP1-202ENST00000544907 PRKAG2Q9UGJ0 569 aa18.08■□□□□ 0.48
TNFAIP1-202ENST00000544907 AFF4Q9UHB7 1163 aaKnown RBP18.08■□□□□ 0.48
TNFAIP1-202ENST00000544907 WASF2Q9Y6W5 498 aa18.08■□□□□ 0.48
TNFAIP1-202ENST00000544907 TTC3P53804 2025 aa18.08■□□□□ 0.48
TNFAIP1-202ENST00000544907 MUSKO15146 869 aa18.07■□□□□ 0.48
TNFAIP1-202ENST00000544907 GOT2P00505 430 aaKnown RBP18.07■□□□□ 0.48
TNFAIP1-202ENST00000544907 ABL2P42684 1182 aa18.07■□□□□ 0.48
TNFAIP1-202ENST00000544907 ATP4BP51164 291 aa18.07■□□□□ 0.48
TNFAIP1-202ENST00000544907 KCNQ1P51787 676 aa18.07■□□□□ 0.48
TNFAIP1-202ENST00000544907 STC1P52823 247 aa18.07■□□□□ 0.48
TNFAIP1-202ENST00000544907 CCNIQ14094 377 aa18.07■□□□□ 0.48
TNFAIP1-202ENST00000544907 TPGS2Q68CL5 300 aa18.07■□□□□ 0.48
TNFAIP1-202ENST00000544907 ANO7Q6IWH7 933 aa18.07■□□□□ 0.48
TNFAIP1-202ENST00000544907 DHDDSQ86SQ9 333 aa18.07■□□□□ 0.48
TNFAIP1-202ENST00000544907 KBTBD6Q86V97 674 aa18.07■□□□□ 0.48
TNFAIP1-202ENST00000544907 SNX32Q86XE0 403 aa18.07■□□□□ 0.48
TNFAIP1-202ENST00000544907 AGR3Q8TD06 166 aa18.07■□□□□ 0.48
TNFAIP1-202ENST00000544907 TRMT2BQ96GJ1 504 aaKnown RBP18.07■□□□□ 0.48
TNFAIP1-202ENST00000544907 TBATAQ96M53 351 aa18.07■□□□□ 0.48
TNFAIP1-202ENST00000544907 NR1H4Q96RI1 486 aaPredicted RBP18.07■□□□□ 0.48
TNFAIP1-202ENST00000544907 HIPK3Q9H422 1215 aa18.07■□□□□ 0.48
TNFAIP1-202ENST00000544907 TFB2MQ9H5Q4 396 aaKnown RBP18.07■□□□□ 0.48
TNFAIP1-202ENST00000544907 CATSPERZQ9NTU4 200 aa18.07■□□□□ 0.48
TNFAIP1-202ENST00000544907 MARCH4Q9P2E8 410 aaPredicted RBP18.07■□□□□ 0.48
TNFAIP1-202ENST00000544907 TBX21Q9UL17 535 aa18.07■□□□□ 0.48
TNFAIP1-202ENST00000544907 TBC1D30Q9Y2I9 924 aa18.07■□□□□ 0.48
TNFAIP1-202ENST00000544907 MIA3Q5JRA6 1907 aa18.07■□□□□ 0.48
TNFAIP1-202ENST00000544907 CHD5Q8TDI0 1954 aa18.07■□□□□ 0.48
TNFAIP1-202ENST00000544907 TANC1Q9C0D5 1861 aa18.06■□□□□ 0.48
TNFAIP1-202ENST00000544907 A0A1B0GVM2 712 aa18.06■□□□□ 0.48
TNFAIP1-202ENST00000544907 TCAF2A6NFQ2 919 aa18.06■□□□□ 0.48
TNFAIP1-202ENST00000544907 TBKBP1A7MCY6 615 aa18.06■□□□□ 0.48
TNFAIP1-202ENST00000544907 SMIM24O75264 130 aa18.06■□□□□ 0.48
TNFAIP1-202ENST00000544907 SMNDC1O75940 238 aaKnown RBP eCLIP18.06■□□□□ 0.48
TNFAIP1-202ENST00000544907 SLC6A4P31645 630 aa18.06■□□□□ 0.48
TNFAIP1-202ENST00000544907 CCR10P46092 362 aa18.06■□□□□ 0.48
TNFAIP1-202ENST00000544907 PSMD8P48556 350 aa18.06■□□□□ 0.48
TNFAIP1-202ENST00000544907 ZNF140P52738 457 aaPredicted RBP18.06■□□□□ 0.48
TNFAIP1-202ENST00000544907 PGGT1BP53609 377 aa18.06■□□□□ 0.48
TNFAIP1-202ENST00000544907 CDKN2DP55273 166 aa18.06■□□□□ 0.48
TNFAIP1-202ENST00000544907 OXCT1P55809 520 aa18.06■□□□□ 0.48
TNFAIP1-202ENST00000544907 SQLEQ14534 574 aa18.06■□□□□ 0.48
TNFAIP1-202ENST00000544907 TAF1AQ15573 450 aaPredicted RBP18.06■□□□□ 0.48
TNFAIP1-202ENST00000544907 CUZD1Q86UP6 607 aa18.06■□□□□ 0.48
TNFAIP1-202ENST00000544907 CIR1Q86X95 450 aaPredicted RBP18.06■□□□□ 0.48
TNFAIP1-202ENST00000544907 DSELQ8IZU8 1212 aa18.06■□□□□ 0.48
TNFAIP1-202ENST00000544907 SPATA6LQ8N4H0 392 aa18.06■□□□□ 0.48
TNFAIP1-202ENST00000544907 ANKRD49Q8WVL7 239 aa18.06■□□□□ 0.48
TNFAIP1-202ENST00000544907 MYEOVQ96EZ4 313 aa18.06■□□□□ 0.48
TNFAIP1-202ENST00000544907 CINPQ9BW66 212 aaPredicted RBP18.06■□□□□ 0.48
TNFAIP1-202ENST00000544907 SYTL2Q9HCH5 934 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms