RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, human

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VAMP1-208	ENST00000544432	TNFRSF10C	O14798	259 aa		13.95	□□□□□ -0.18
VAMP1-208	ENST00000544432	PSTPIP1	O43586	416 aa		13.95	□□□□□ -0.18
VAMP1-208	ENST00000544432	NEBL	O76041	1014 aa		13.95	□□□□□ -0.18
VAMP1-208	ENST00000544432	TEAD1	P28347	426 aa		13.95	□□□□□ -0.18
VAMP1-208	ENST00000544432	HNF1B	P35680	557 aa		13.95	□□□□□ -0.18
VAMP1-208	ENST00000544432	HK3	P52790	923 aa		13.95	□□□□□ -0.18
VAMP1-208	ENST00000544432	KIAA1024L	P59773	190 aa		13.95	□□□□□ -0.18
VAMP1-208	ENST00000544432	RPL26	P61254	145 aa	Known RBP	13.95	□□□□□ -0.18
VAMP1-208	ENST00000544432	IFI35	P80217	286 aa	Predicted RBP	13.95	□□□□□ -0.18
VAMP1-208	ENST00000544432	DAB2	P98082	770 aa		13.95	□□□□□ -0.18
VAMP1-208	ENST00000544432	ITK	Q08881	620 aa		13.95	□□□□□ -0.18
VAMP1-208	ENST00000544432	SPA17	Q15506	151 aa		13.95	□□□□□ -0.18
VAMP1-208	ENST00000544432	CNGA3	Q16281	694 aa		13.95	□□□□□ -0.18
VAMP1-208	ENST00000544432	TAZ	Q16635	292 aa		13.95	□□□□□ -0.18
VAMP1-208	ENST00000544432	FAXC	Q5TGI0	409 aa		13.95	□□□□□ -0.18
VAMP1-208	ENST00000544432	ESRP1	Q6NXG1	681 aa	Known RBP	13.95	□□□□□ -0.18
VAMP1-208	ENST00000544432	LVRN	Q6Q4G3	990 aa		13.95	□□□□□ -0.18
VAMP1-208	ENST00000544432	USP45	Q70EL2	814 aa		13.95	□□□□□ -0.18
VAMP1-208	ENST00000544432	TMTC1	Q8IUR5	882 aa		13.95	□□□□□ -0.18
VAMP1-208	ENST00000544432	RAVER1	Q8IY67	606 aa	Known RBP	13.95	□□□□□ -0.18
VAMP1-208	ENST00000544432	FSTL5	Q8N475	847 aa	Predicted RBP	13.95	□□□□□ -0.18
VAMP1-208	ENST00000544432	PDCD7	Q8N8D1	485 aa	Known RBP	13.95	□□□□□ -0.18
VAMP1-208	ENST00000544432	ARRDC2	Q8TBH0	407 aa		13.95	□□□□□ -0.18
VAMP1-208	ENST00000544432	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	13.95	□□□□□ -0.18
VAMP1-208	ENST00000544432	LMX1A	Q8TE12	382 aa		13.95	□□□□□ -0.18
VAMP1-208	ENST00000544432	PDCD6IP	Q8WUM4	868 aa	Known RBP	13.95	□□□□□ -0.18
VAMP1-208	ENST00000544432	ZCCHC14	Q8WYQ9	949 aa	Known RBP	13.95	□□□□□ -0.18
VAMP1-208	ENST00000544432	IL12RB2	Q99665	862 aa		13.95	□□□□□ -0.18
VAMP1-208	ENST00000544432	CAAP1	Q9H8G2	361 aa		13.95	□□□□□ -0.18
VAMP1-208	ENST00000544432	ZMIZ1	Q9ULJ6	1067 aa		13.95	□□□□□ -0.18
VAMP1-208	ENST00000544432	RPL26L1	Q9UNX3	145 aa	Known RBP	13.95	□□□□□ -0.18
VAMP1-208	ENST00000544432	ALG6	Q9Y672	507 aa		13.95	□□□□□ -0.18
VAMP1-208	ENST00000544432	DGKB	Q9Y6T7	804 aa		13.95	□□□□□ -0.18
VAMP1-208	ENST00000544432		U3KQA8	63 aa		13.95	□□□□□ -0.18
VAMP1-208	ENST00000544432	ANKRD11	Q6UB99	2663 aa	Predicted RBP	13.95	□□□□□ -0.18
VAMP1-208	ENST00000544432	ANKRD36	A6QL64	1941 aa		13.94	□□□□□ -0.18
VAMP1-208	ENST00000544432	APOL1	O14791	398 aa		13.94	□□□□□ -0.18
VAMP1-208	ENST00000544432	SPOP	O43791	374 aa		13.94	□□□□□ -0.18
VAMP1-208	ENST00000544432	GCAT	O75600	419 aa		13.94	□□□□□ -0.18
VAMP1-208	ENST00000544432	RASGRP1	O95267	797 aa		13.94	□□□□□ -0.18
VAMP1-208	ENST00000544432	MAP3K6	O95382	1288 aa		13.94	□□□□□ -0.18
VAMP1-208	ENST00000544432	KRT1	P04264	644 aa		13.94	□□□□□ -0.18
VAMP1-208	ENST00000544432	PCCB	P05166	539 aa		13.94	□□□□□ -0.18
VAMP1-208	ENST00000544432	JUP	P14923	745 aa		13.94	□□□□□ -0.18
VAMP1-208	ENST00000544432	CA4	P22748	312 aa		13.94	□□□□□ -0.18
VAMP1-208	ENST00000544432	KEL	P23276	732 aa		13.94	□□□□□ -0.18
VAMP1-208	ENST00000544432	NOP2	P46087	812 aa	Known RBP	13.94	□□□□□ -0.18
VAMP1-208	ENST00000544432	SRP54	P61011	504 aa	Known RBP	13.94	□□□□□ -0.18
VAMP1-208	ENST00000544432	IHH	Q14623	411 aa		13.94	□□□□□ -0.18
VAMP1-208	ENST00000544432	ACOX1	Q15067	660 aa		13.94	□□□□□ -0.18
VAMP1-208	ENST00000544432	PDK1	Q15118	436 aa		13.94	□□□□□ -0.18
VAMP1-208	ENST00000544432	ELOC	Q15369	112 aa		13.94	□□□□□ -0.18
VAMP1-208	ENST00000544432	ALG11	Q2TAA5	492 aa		13.94	□□□□□ -0.18
VAMP1-208	ENST00000544432	LRRK1	Q38SD2	2015 aa		13.94	□□□□□ -0.18
VAMP1-208	ENST00000544432	ODF2	Q5BJF6	829 aa		13.94	□□□□□ -0.18
VAMP1-208	ENST00000544432	PRRT3	Q5FWE3	981 aa		13.94	□□□□□ -0.18
VAMP1-208	ENST00000544432	PNCK	Q6P2M8	343 aa		13.94	□□□□□ -0.18
VAMP1-208	ENST00000544432	ENPP7	Q6UWV6	458 aa		13.94	□□□□□ -0.18
VAMP1-208	ENST00000544432	BZW1	Q7L1Q6	419 aa	Known RBP	13.94	□□□□□ -0.18
VAMP1-208	ENST00000544432	NLRP8	Q86W28	1048 aa		13.94	□□□□□ -0.18
VAMP1-208	ENST00000544432	RBFA	Q8N0V3	343 aa		13.94	□□□□□ -0.18
VAMP1-208	ENST00000544432	PLA2G15	Q8NCC3	412 aa		13.94	□□□□□ -0.18
VAMP1-208	ENST00000544432	CCNY	Q8ND76	341 aa		13.94	□□□□□ -0.18
VAMP1-208	ENST00000544432	GLMN	Q92990	594 aa		13.94	□□□□□ -0.18
VAMP1-208	ENST00000544432	FUBP1	Q96AE4	644 aa	Known RBP	13.94	□□□□□ -0.18
VAMP1-208	ENST00000544432	WDR92	Q96MX6	357 aa		13.94	□□□□□ -0.18
VAMP1-208	ENST00000544432	OLFM3	Q96PB7	478 aa		13.94	□□□□□ -0.18
VAMP1-208	ENST00000544432	LRRC61	Q9BV99	259 aa		13.94	□□□□□ -0.18
VAMP1-208	ENST00000544432	BOC	Q9BWV1	1114 aa		13.94	□□□□□ -0.18
VAMP1-208	ENST00000544432	TCEAL2	Q9H3H9	227 aa	Predicted RBP	13.94	□□□□□ -0.18
VAMP1-208	ENST00000544432	DNPEP	Q9ULA0	475 aa		13.94	□□□□□ -0.18
VAMP1-208	ENST00000544432	OR1A2	Q9Y585	309 aa		13.94	□□□□□ -0.18
VAMP1-208	ENST00000544432	EPN1	Q9Y6I3	576 aa	Predicted RBP	13.94	□□□□□ -0.18
VAMP1-208	ENST00000544432	WDFY3	Q8IZQ1	3526 aa		13.94	□□□□□ -0.18
VAMP1-208	ENST00000544432	SHROOM3	Q8TF72	1996 aa		13.93	□□□□□ -0.18
VAMP1-208	ENST00000544432	TRABD2B	A6NFA1	517 aa		13.93	□□□□□ -0.18
VAMP1-208	ENST00000544432	NPIPB15	A6NHN6	443 aa	Predicted RBP	13.93	□□□□□ -0.18
VAMP1-208	ENST00000544432		A8MX80	341 aa		13.93	□□□□□ -0.18
VAMP1-208	ENST00000544432	CACNB4	O00305	520 aa	Predicted RBP	13.93	□□□□□ -0.18
VAMP1-208	ENST00000544432	PDE2A	O00408	941 aa	Predicted RBP	13.93	□□□□□ -0.18
VAMP1-208	ENST00000544432	PRL	P01236	227 aa		13.93	□□□□□ -0.18
VAMP1-208	ENST00000544432	JCHAIN	P01591	159 aa		13.93	□□□□□ -0.18
VAMP1-208	ENST00000544432	HLA-DQB2	P05538	268 aa		13.93	□□□□□ -0.18
VAMP1-208	ENST00000544432	ANXA6	P08133	673 aa		13.93	□□□□□ -0.18
VAMP1-208	ENST00000544432	PDHA1	P08559	390 aa		13.93	□□□□□ -0.18
VAMP1-208	ENST00000544432	ALPI	P09923	528 aa		13.93	□□□□□ -0.18
VAMP1-208	ENST00000544432	TSHR	P16473	764 aa		13.93	□□□□□ -0.18
VAMP1-208	ENST00000544432	ZNF30	P17039	623 aa		13.93	□□□□□ -0.18
VAMP1-208	ENST00000544432	LHCGR	P22888	699 aa		13.93	□□□□□ -0.18
VAMP1-208	ENST00000544432	CDKN2B	P42772	138 aa		13.93	□□□□□ -0.18
VAMP1-208	ENST00000544432	NR2C2	P49116	596 aa		13.93	□□□□□ -0.18
VAMP1-208	ENST00000544432	RPIA	P49247	311 aa		13.93	□□□□□ -0.18
VAMP1-208	ENST00000544432	INSM1	Q01101	510 aa	Predicted RBP	13.93	□□□□□ -0.18
VAMP1-208	ENST00000544432	DSC2	Q02487	901 aa		13.93	□□□□□ -0.18
VAMP1-208	ENST00000544432	DPT	Q07507	201 aa		13.93	□□□□□ -0.18
VAMP1-208	ENST00000544432	NIPAL4	Q0D2K0	466 aa		13.93	□□□□□ -0.18
VAMP1-208	ENST00000544432	TFDP2	Q14188	446 aa		13.93	□□□□□ -0.18
VAMP1-208	ENST00000544432	DEFB133	Q30KQ1	61 aa		13.93	□□□□□ -0.18
VAMP1-208	ENST00000544432	HES3	Q5TGS1	186 aa		13.93	□□□□□ -0.18
VAMP1-208	ENST00000544432	C11orf63	Q6NUN7	778 aa		13.93	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 37 ms