RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 TARSL2A2RTX5 802 aaKnown RBP4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 CBY3A6NI87 242 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 SEC14L5O43304 696 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 B3GALNT1O75752 331 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 SLCO2B1O94956 709 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 NDUFA10O95299 355 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 SNRNP70P08621 437 aaKnown RBP4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 NPSP0C0P6 89 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 SUPT20HL2P0C7V6 817 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 APEHP13798 732 aaKnown RBP4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 MMP9P14780 707 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 PCSK6P29122 969 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 RAB28P51157 221 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 ZNF84P51523 738 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 CLCN3P51790 818 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 ZNF131P52739 623 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 HMGA2P52926 109 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 COPB1P53618 953 aaKnown RBP4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 SLC12A2P55011 1212 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 TFAP4Q01664 338 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 RALGDSQ12967 914 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 DRAP1Q14919 205 aaPredicted RBP4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 MFSD13AQ14CX5 517 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 MORF4L2Q15014 288 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 TYSND1Q2T9J0 566 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 ANXA2RQ3ZCQ2 193 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 SUPT20HL1Q3ZLR7 823 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 NHSL2Q5HYW2 709 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 SEPT14Q6ZU15 432 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 LIMS2Q7Z4I7 341 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 WDR53Q7Z5U6 358 aaPredicted RBP4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 CAMKMTQ7Z624 323 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 IQCHQ86VS3 1027 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 SIX6OS1Q8N1H7 587 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 LNX2Q8N448 690 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 ARL6IP6Q8N6S5 226 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 LINC01465Q8N7H1 131 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 TRIML1Q8N9V2 468 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 IQUBQ8NA54 791 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 HJURPQ8NCD3 748 aaPredicted RBP4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 PTPMT1Q8WUK0 201 aaPredicted RBP4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 RFKQ969G6 155 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 FUBP1Q96AE4 644 aaKnown RBP4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 HDAC11Q96DB2 347 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 FAM89AQ96GI7 184 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 KAZALD1Q96I82 304 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 FBXL20Q96IG2 436 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 TMEM68Q96MH6 324 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 TEFMQ96QE5 360 aaKnown RBP4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 FRG2BQ96QU4 278 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 CDK5RAP1Q96SZ6 601 aaKnown RBP4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 MMS19Q96T76 1030 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 ADAM2Q99965 735 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 SCAND2PQ9GZW5 306 aaPredicted RBP4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 TXNRD2Q9NNW7 524 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 DUSP22Q9NRW4 184 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 PDRG1Q9NUG6 133 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 CHCHD3Q9NX63 227 aaKnown RBP4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 GRHL1Q9NZI5 618 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 SEMA5BQ9P283 1151 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 EPS15L1Q9UBC2 864 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 CRNNQ9UBG3 495 aaPredicted RBP4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 CACNG4Q9UBN1 327 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 FBXO4Q9UKT5 387 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 NAP1L2Q9ULW6 460 aaPredicted RBP4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 PLAGL1Q9UM63 463 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 EXO1Q9UQ84 846 aaKnown RBP4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 HEMK1Q9Y5R4 338 aaPredicted RBP4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 SIRT4Q9Y6E7 314 aaPredicted RBP4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 LRRC7Q96NW7 1537 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 A2ML1A8K2U0 1454 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 MROH2AA6NES4 1674 aa4.03□□□□□ -1.76
SFSWAP-211ENST00000542813 ABCA6Q8N139 1617 aa4.03□□□□□ -1.77
SFSWAP-211ENST00000542813 NEURL4Q96JN8 1562 aa4.02□□□□□ -1.77
SFSWAP-211ENST00000542813 UTYO14607 1347 aa4.02□□□□□ -1.77
SFSWAP-211ENST00000542813 SPATA31A1Q5TZJ5 1347 aa4.02□□□□□ -1.77
SFSWAP-211ENST00000542813 A0A1W2PR77 199 aa4.02□□□□□ -1.77
SFSWAP-211ENST00000542813 NPEPPSL1A6NEC2 478 aa4.02□□□□□ -1.77
SFSWAP-211ENST00000542813 UNC119BA6NIH7 251 aa4.02□□□□□ -1.77
SFSWAP-211ENST00000542813 OR6C76A6NM76 312 aa4.02□□□□□ -1.77
SFSWAP-211ENST00000542813 CLIC1O00299 241 aa4.02□□□□□ -1.77
SFSWAP-211ENST00000542813 CYR61O00622 381 aa4.02□□□□□ -1.77
SFSWAP-211ENST00000542813 YY2O15391 372 aa4.02□□□□□ -1.77
SFSWAP-211ENST00000542813 KINO60870 393 aaKnown RBP4.02□□□□□ -1.77
SFSWAP-211ENST00000542813 KERAO60938 352 aa4.02□□□□□ -1.77
SFSWAP-211ENST00000542813 SPDEFO95238 335 aa4.02□□□□□ -1.77
SFSWAP-211ENST00000542813 DDAH2O95865 285 aa4.02□□□□□ -1.77
SFSWAP-211ENST00000542813 PENKP01210 267 aaPredicted RBP4.02□□□□□ -1.77
SFSWAP-211ENST00000542813 ENO1P06733 434 aaKnown RBP4.02□□□□□ -1.77
SFSWAP-211ENST00000542813 NR2F6P10588 404 aa4.02□□□□□ -1.77
SFSWAP-211ENST00000542813 ACTN1P12814 892 aa4.02□□□□□ -1.77
SFSWAP-211ENST00000542813 ZNF182P17025 639 aaPredicted RBP4.02□□□□□ -1.77
SFSWAP-211ENST00000542813 ATF7P17544 494 aaPredicted RBP4.02□□□□□ -1.77
SFSWAP-211ENST00000542813 PTPN2P17706 415 aa4.02□□□□□ -1.77
SFSWAP-211ENST00000542813 ITGAXP20702 1163 aa4.02□□□□□ -1.77
SFSWAP-211ENST00000542813 COMTP21964 271 aa4.02□□□□□ -1.77
SFSWAP-211ENST00000542813 HIBADHP31937 336 aaKnown RBP4.02□□□□□ -1.77
SFSWAP-211ENST00000542813 CYP2C18P33260 490 aa4.02□□□□□ -1.77
SFSWAP-211ENST00000542813 MATR3P43243 847 aaKnown RBP eCLIP4.02□□□□□ -1.77
SFSWAP-211ENST00000542813 SUOXP51687 545 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms