RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 EIF4E1BA6NMX2 242 aaKnown RBP6.56□□□□□ -1.36
PTPRO-208ENST00000542557 TBC1D4O60343 1298 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 RPP40O75818 363 aaKnown RBP6.56□□□□□ -1.36
PTPRO-208ENST00000542557 UQCRBP14927 111 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 CD1EP15812 388 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 ME2P23368 584 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 PEX2P28328 305 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 CDKN2DP55273 166 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 TAF10Q12962 218 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 ART3Q13508 389 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 FLOT2Q14254 428 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 PTK2BQ14289 1009 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 ZNF235Q14590 738 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 TRIP10Q15642 601 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 SFT2D3Q587I9 215 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 C10orf120Q5SQS8 335 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 MRNIPQ6NTE8 343 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 PTAR1Q7Z6K3 402 aaPredicted RBP6.56□□□□□ -1.36
PTPRO-208ENST00000542557 SDCCAG8Q86SQ7 713 aaPredicted RBP6.56□□□□□ -1.36
PTPRO-208ENST00000542557 SLC43A3Q8NBI5 491 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 OR6P1Q8NGX9 317 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 ANKRD49Q8WVL7 239 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 TOP1MTQ969P6 601 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 PPP1R36Q96LQ0 422 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 CEP295NLQ96MC4 621 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 GLT1D1Q96MS3 346 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 CDK5RAP1Q96SZ6 601 aaKnown RBP6.56□□□□□ -1.36
PTPRO-208ENST00000542557 CDRT15Q96T59 188 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 SEMA3CQ99985 751 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 UNKQ9C0B0 810 aaKnown RBP6.56□□□□□ -1.36
PTPRO-208ENST00000542557 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.56□□□□□ -1.36
PTPRO-208ENST00000542557 MRPL42Q9Y6G3 142 aaKnown RBP6.56□□□□□ -1.36
PTPRO-208ENST00000542557 CCDC189A1A4V9 331 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 SKAP2O75563 359 aaPredicted RBP6.56□□□□□ -1.36
PTPRO-208ENST00000542557 BCAS2O75934 225 aaPredicted RBP6.56□□□□□ -1.36
PTPRO-208ENST00000542557 GLP2RO95838 553 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 TBX18O95935 607 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 HNRNPLP14866 589 aaKnown RBP eCLIP6.56□□□□□ -1.36
PTPRO-208ENST00000542557 XRCC1P18887 633 aaPredicted RBP6.56□□□□□ -1.36
PTPRO-208ENST00000542557 TACR2P21452 398 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 OR1E1P30953 314 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 CLCN2P51788 898 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 ELAVL2Q12926 359 aaKnown RBP6.56□□□□□ -1.36
PTPRO-208ENST00000542557 STX5Q13190 355 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 CEACAM7Q14002 265 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 TYSND1Q2T9J0 566 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 ZNF678Q5SXM1 525 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 RASIP1Q5U651 963 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 FAM171A1Q5VUB5 890 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 NADSYN1Q6IA69 706 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 ISCA2Q86U28 154 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 ZNF354CQ86Y25 554 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 MIB1Q86YT6 1006 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 BBS5Q8N3I7 341 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 TTC9BQ8N6N2 239 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 EFCAB3Q8N7B9 438 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 CATSPER1Q8NEC5 780 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 RHEBL1Q8TAI7 183 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 PIP4K2CQ8TBX8 421 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 BRSK1Q8TDC3 778 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 MGME1Q9BQP7 344 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 TSEN34Q9BSV6 310 aaKnown RBP6.56□□□□□ -1.36
PTPRO-208ENST00000542557 TTLL2Q9BWV7 592 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 FAM192AQ9GZU8 254 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 EBF3Q9H4W6 596 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 CYP4F12Q9HCS2 524 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 INTS10Q9NVR2 710 aaKnown RBP6.56□□□□□ -1.36
PTPRO-208ENST00000542557 MARCH5Q9NX47 278 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 MARCH4Q9P2E8 410 aaPredicted RBP6.56□□□□□ -1.36
PTPRO-208ENST00000542557 SUCOQ9UBS9 1254 aaKnown RBP6.56□□□□□ -1.36
PTPRO-208ENST00000542557 F5H5T6 163 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 TRIM38O00635 465 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 UBDO15205 165 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 SMIM24O75264 130 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 CAPNS1P04632 268 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 ENO3P13929 434 aaPredicted RBP6.56□□□□□ -1.36
PTPRO-208ENST00000542557 CD1DP15813 335 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 PSMA3P25788 255 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 ACVRL1P37023 503 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 DPP6P42658 865 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 ACADVLP49748 655 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 AQP4P55087 323 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 HERVK_113P63132 956 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 IRX1P78414 480 aaPredicted RBP6.56□□□□□ -1.36
PTPRO-208ENST00000542557 MED21Q13503 144 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 GPR158Q5T848 1215 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 LPCAT4Q643R3 524 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 TMEM207Q6UWW9 146 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 HACD2Q6Y1H2 254 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 RNF135Q8IUD6 432 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 HMGCLL1Q8TB92 370 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 TRIB3Q96RU7 358 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 ERVK-6Q9BXR3 956 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 MRPL1Q9BYD6 325 aaKnown RBP6.56□□□□□ -1.36
PTPRO-208ENST00000542557 MAGEH1Q9H213 219 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 PIF1Q9H611 641 aa6.56□□□□□ -1.36
PTPRO-208ENST00000542557 G3BP2Q9UN86 482 aaKnown RBP6.56□□□□□ -1.36
PTPRO-208ENST00000542557 CENPFP49454 3210 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 PRSS51A0A1B0GVH4 220 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 H7C4K7 107 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms