RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 ARNTP27540 789 aa15.37■□□□□ 0.05
CNOT9-208ENST00000542068 PIWIL4Q7Z3Z4 852 aaKnown RBP15.37■□□□□ 0.05
CNOT9-208ENST00000542068 RDH11Q8TC12 318 aa15.37■□□□□ 0.05
CNOT9-208ENST00000542068 GTF3C2Q8WUA4 911 aaPredicted RBP15.37■□□□□ 0.05
CNOT9-208ENST00000542068 ITFG2Q969R8 447 aa15.37■□□□□ 0.05
CNOT9-208ENST00000542068 C12orf43Q96C57 262 aaKnown RBP15.37■□□□□ 0.05
CNOT9-208ENST00000542068 ZNF597Q96LX8 424 aa15.37■□□□□ 0.05
CNOT9-208ENST00000542068 NT5MQ9NPB1 228 aa15.37■□□□□ 0.05
CNOT9-208ENST00000542068 TIMMDC1Q9NPL8 285 aa15.37■□□□□ 0.05
CNOT9-208ENST00000542068 SLC38A7Q9NVC3 462 aa15.37■□□□□ 0.05
CNOT9-208ENST00000542068 PLK2Q9NYY3 685 aa15.37■□□□□ 0.05
CNOT9-208ENST00000542068 TARM1B6A8C7 271 aa15.37■□□□□ 0.05
CNOT9-208ENST00000542068 KCNE1P15382 129 aa15.37■□□□□ 0.05
CNOT9-208ENST00000542068 NR4A1P22736 598 aa15.37■□□□□ 0.05
CNOT9-208ENST00000542068 AXLP30530 894 aa15.37■□□□□ 0.05
CNOT9-208ENST00000542068 KCNC1P48547 511 aa15.37■□□□□ 0.05
CNOT9-208ENST00000542068 PGFP49763 221 aa15.37■□□□□ 0.05
CNOT9-208ENST00000542068 APLP1P51693 650 aa15.37■□□□□ 0.05
CNOT9-208ENST00000542068 PTPRCAPQ14761 206 aa15.37■□□□□ 0.05
CNOT9-208ENST00000542068 GDF6Q6KF10 455 aaPredicted RBP15.37■□□□□ 0.05
CNOT9-208ENST00000542068 RETREG3Q86VR2 466 aa15.37■□□□□ 0.05
CNOT9-208ENST00000542068 GIPC3Q8TF64 312 aa15.37■□□□□ 0.05
CNOT9-208ENST00000542068 FCRL2Q96LA5 508 aaPredicted RBP15.37■□□□□ 0.05
CNOT9-208ENST00000542068 MRPL57Q9BQC6 102 aaKnown RBP15.37■□□□□ 0.05
CNOT9-208ENST00000542068 PAGE1O75459 146 aa15.37■□□□□ 0.05
CNOT9-208ENST00000542068 OR1G1P47890 313 aa15.37■□□□□ 0.05
CNOT9-208ENST00000542068 MRPS6P82932 125 aaKnown RBP15.37■□□□□ 0.05
CNOT9-208ENST00000542068 ECT2LQ008S8 904 aa15.37■□□□□ 0.05
CNOT9-208ENST00000542068 UGP2Q16851 508 aa15.37■□□□□ 0.05
CNOT9-208ENST00000542068 OTUD3Q5T2D3 398 aaPredicted RBP15.37■□□□□ 0.05
CNOT9-208ENST00000542068 CARM1Q86X55 608 aa15.37■□□□□ 0.05
CNOT9-208ENST00000542068 CNGB3Q9NQW8 809 aa15.37■□□□□ 0.05
CNOT9-208ENST00000542068 TRHDEQ9UKU6 1024 aa15.37■□□□□ 0.05
CNOT9-208ENST00000542068 A0A1W2PPW3 197 aa15.36■□□□□ 0.05
CNOT9-208ENST00000542068 RBM47A0AV96 593 aaKnown RBP15.36■□□□□ 0.05
CNOT9-208ENST00000542068 TBX18O95935 607 aa15.36■□□□□ 0.05
CNOT9-208ENST00000542068 SLC7A1P30825 629 aa15.36■□□□□ 0.05
CNOT9-208ENST00000542068 CDK9P50750 372 aaKnown RBP15.36■□□□□ 0.05
CNOT9-208ENST00000542068 CTBSQ01459 385 aa15.36■□□□□ 0.05
CNOT9-208ENST00000542068 TSPY1Q01534 308 aa15.36■□□□□ 0.05
CNOT9-208ENST00000542068 ATP1A4Q13733 1029 aa15.36■□□□□ 0.05
CNOT9-208ENST00000542068 SQLEQ14534 574 aa15.36■□□□□ 0.05
CNOT9-208ENST00000542068 HERC3Q15034 1050 aa15.36■□□□□ 0.05
CNOT9-208ENST00000542068 SLC39A12Q504Y0 691 aa15.36■□□□□ 0.05
CNOT9-208ENST00000542068 C6orf10Q5SRN2 563 aa15.36■□□□□ 0.05
CNOT9-208ENST00000542068 AFAP1L2Q8N4X5 818 aa15.36■□□□□ 0.05
CNOT9-208ENST00000542068 DCBLD1Q8N8Z6 715 aa15.36■□□□□ 0.05
CNOT9-208ENST00000542068 KIFC1Q9BW19 673 aa15.36■□□□□ 0.05
CNOT9-208ENST00000542068 MUC3BQ9H195 1237 aa15.36■□□□□ 0.05
CNOT9-208ENST00000542068 SPC25Q9HBM1 224 aa15.36■□□□□ 0.05
CNOT9-208ENST00000542068 SUCOQ9UBS9 1254 aaKnown RBP15.36■□□□□ 0.05
CNOT9-208ENST00000542068 VPS28Q9UK41 221 aa15.36■□□□□ 0.05
CNOT9-208ENST00000542068 OAZ3Q9UMX2 235 aa15.36■□□□□ 0.05
CNOT9-208ENST00000542068 UBFD1O14562 309 aaKnown RBP15.36■□□□□ 0.05
CNOT9-208ENST00000542068 IPO13O94829 963 aaKnown RBP15.36■□□□□ 0.05
CNOT9-208ENST00000542068 HSPA8P11142 646 aaKnown RBP15.36■□□□□ 0.05
CNOT9-208ENST00000542068 OXTRP30559 389 aa15.36■□□□□ 0.05
CNOT9-208ENST00000542068 SAMD4BQ5PRF9 694 aaKnown RBP15.36■□□□□ 0.05
CNOT9-208ENST00000542068 TMEM26Q6ZUK4 368 aa15.36■□□□□ 0.05
CNOT9-208ENST00000542068 LRRTM3Q86VH5 581 aa15.36■□□□□ 0.05
CNOT9-208ENST00000542068 CIR1Q86X95 450 aaPredicted RBP15.36■□□□□ 0.05
CNOT9-208ENST00000542068 ERI1Q8IV48 349 aaKnown RBP15.36■□□□□ 0.05
CNOT9-208ENST00000542068 MAGEE2Q8TD90 523 aaPredicted RBP15.36■□□□□ 0.05
CNOT9-208ENST00000542068 POLR1BQ9H9Y6 1135 aa15.36■□□□□ 0.05
CNOT9-208ENST00000542068 DUS2Q9NX74 493 aaKnown RBP15.36■□□□□ 0.05
CNOT9-208ENST00000542068 PADI3Q9ULW8 664 aa15.36■□□□□ 0.05
CNOT9-208ENST00000542068 A0A0J9YYE9 177 aa15.35■□□□□ 0.05
CNOT9-208ENST00000542068 H3BMM5 538 aa15.35■□□□□ 0.05
CNOT9-208ENST00000542068 LINC00032P0C843 101 aa15.35■□□□□ 0.05
CNOT9-208ENST00000542068 GPR15P49685 360 aa15.35■□□□□ 0.05
CNOT9-208ENST00000542068 EFEMP1Q12805 493 aa15.35■□□□□ 0.05
CNOT9-208ENST00000542068 AGMOQ6ZNB7 445 aa15.35■□□□□ 0.05
CNOT9-208ENST00000542068 LRRC43Q8N309 656 aa15.35■□□□□ 0.05
CNOT9-208ENST00000542068 VPS33AQ96AX1 596 aa15.35■□□□□ 0.05
CNOT9-208ENST00000542068 ISOC1Q96CN7 298 aa15.35■□□□□ 0.05
CNOT9-208ENST00000542068 TUBGCP3Q96CW5 907 aa15.35■□□□□ 0.05
CNOT9-208ENST00000542068 KATNAL1Q9BW62 490 aa15.35■□□□□ 0.05
CNOT9-208ENST00000542068 GTF2IRD1Q9UHL9 959 aa15.35■□□□□ 0.05
CNOT9-208ENST00000542068 USP22Q9UPT9 525 aa15.35■□□□□ 0.05
CNOT9-208ENST00000542068 KCTD3Q9Y597 815 aa15.35■□□□□ 0.05
CNOT9-208ENST00000542068 MBLAC1A4D2B0 266 aaPredicted RBP15.35■□□□□ 0.05
CNOT9-208ENST00000542068 NCF1BA6NI72 391 aaPredicted RBP15.35■□□□□ 0.05
CNOT9-208ENST00000542068 GOLGA8CPA6NN73 597 aa15.35■□□□□ 0.05
CNOT9-208ENST00000542068 NCF1CA8MVU1 366 aaPredicted RBP15.35■□□□□ 0.05
CNOT9-208ENST00000542068 J3QRK9 145 aa15.35■□□□□ 0.05
CNOT9-208ENST00000542068 B4GAT1O43505 415 aa15.35■□□□□ 0.05
CNOT9-208ENST00000542068 BAIAP3O94812 1187 aa15.35■□□□□ 0.05
CNOT9-208ENST00000542068 ZNF865P0CJ78 1059 aaPredicted RBP15.35■□□□□ 0.05
CNOT9-208ENST00000542068 ODC1P11926 461 aa15.35■□□□□ 0.05
CNOT9-208ENST00000542068 NCF1P14598 390 aaPredicted RBP15.35■□□□□ 0.05
CNOT9-208ENST00000542068 GRK4P32298 578 aa15.35■□□□□ 0.05
CNOT9-208ENST00000542068 GALNT2Q10471 571 aa15.35■□□□□ 0.05
CNOT9-208ENST00000542068 GRB7Q14451 532 aa15.35■□□□□ 0.05
CNOT9-208ENST00000542068 FBXL8Q96CD0 374 aa15.35■□□□□ 0.05
CNOT9-208ENST00000542068 NSUN5Q96P11 429 aaKnown RBP15.35■□□□□ 0.05
CNOT9-208ENST00000542068 IGSF5Q9NSI5 407 aa15.35■□□□□ 0.05
CNOT9-208ENST00000542068 ANGPT2O15123 496 aa15.35■□□□□ 0.05
CNOT9-208ENST00000542068 CLOCKO15516 846 aa15.35■□□□□ 0.05
CNOT9-208ENST00000542068 ATE1O95260 518 aa15.35■□□□□ 0.05
CNOT9-208ENST00000542068 FOXA1P55317 472 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms