RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 KIAA0754O94854 1291 aa9.48□□□□□ -0.89
YBX3-211ENST00000541351 GSRP00390 522 aa9.48□□□□□ -0.89
YBX3-211ENST00000541351 STSP08842 583 aa9.48□□□□□ -0.89
YBX3-211ENST00000541351 ANKRD34CP0C6C1 535 aa9.48□□□□□ -0.89
YBX3-211ENST00000541351 LPOP22079 712 aaPredicted RBP9.48□□□□□ -0.89
YBX3-211ENST00000541351 GJB2P29033 226 aa9.48□□□□□ -0.89
YBX3-211ENST00000541351 PTPN4P29074 926 aa9.48□□□□□ -0.89
YBX3-211ENST00000541351 OR1E1P30953 314 aa9.48□□□□□ -0.89
YBX3-211ENST00000541351 GTF2H1P32780 548 aa9.48□□□□□ -0.89
YBX3-211ENST00000541351 FASLGP48023 281 aa9.48□□□□□ -0.89
YBX3-211ENST00000541351 GLRBP48167 497 aa9.48□□□□□ -0.89
YBX3-211ENST00000541351 GCLMP48507 274 aa9.48□□□□□ -0.89
YBX3-211ENST00000541351 TMEM52BQ4KMG9 183 aa9.48□□□□□ -0.89
YBX3-211ENST00000541351 PMF1Q6P1K2 205 aa9.48□□□□□ -0.89
YBX3-211ENST00000541351 CNNM4Q6P4Q7 775 aa9.48□□□□□ -0.89
YBX3-211ENST00000541351 GDPD4Q6W3E5 623 aa9.48□□□□□ -0.89
YBX3-211ENST00000541351 UNC13DQ70J99 1090 aa9.48□□□□□ -0.89
YBX3-211ENST00000541351 GUF1Q8N442 669 aaKnown RBP9.48□□□□□ -0.89
YBX3-211ENST00000541351 AVL9Q8NBF6 648 aa9.48□□□□□ -0.89
YBX3-211ENST00000541351 FBXL13Q8NEE6 735 aa9.48□□□□□ -0.89
YBX3-211ENST00000541351 FDCSPQ8NFU4 85 aa9.48□□□□□ -0.89
YBX3-211ENST00000541351 OR2AP1Q8NGE2 309 aa9.48□□□□□ -0.89
YBX3-211ENST00000541351 KLHL32Q96NJ5 620 aa9.48□□□□□ -0.89
YBX3-211ENST00000541351 SPON2Q9BUD6 331 aa9.48□□□□□ -0.89
YBX3-211ENST00000541351 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.48□□□□□ -0.89
YBX3-211ENST00000541351 WDR26Q9H7D7 661 aa9.48□□□□□ -0.89
YBX3-211ENST00000541351 CARS2Q9HA77 564 aaKnown RBP9.48□□□□□ -0.89
YBX3-211ENST00000541351 FGF22Q9HCT0 170 aa9.48□□□□□ -0.89
YBX3-211ENST00000541351 ATP13A1Q9HD20 1204 aa9.48□□□□□ -0.89
YBX3-211ENST00000541351 SPATS2LQ9NUQ6 558 aaKnown RBP9.48□□□□□ -0.89
YBX3-211ENST00000541351 DMAC2Q9NW81 257 aa9.48□□□□□ -0.89
YBX3-211ENST00000541351 ARHGEF38Q9NXL2 777 aa9.48□□□□□ -0.89
YBX3-211ENST00000541351 KCTD5Q9NXV2 234 aa9.48□□□□□ -0.89
YBX3-211ENST00000541351 TMEM9Q9P0T7 183 aa9.48□□□□□ -0.89
YBX3-211ENST00000541351 HPCAL4Q9UM19 191 aa9.48□□□□□ -0.89
YBX3-211ENST00000541351 TNRC6AQ8NDV7 1962 aaKnown RBP9.48□□□□□ -0.89
YBX3-211ENST00000541351 ILVBLA1L0T0 632 aa9.47□□□□□ -0.89
YBX3-211ENST00000541351 GOLGA6L3A6NEY3 463 aa9.47□□□□□ -0.89
YBX3-211ENST00000541351 RNF103O00237 685 aa9.47□□□□□ -0.89
YBX3-211ENST00000541351 PIK3R2O00459 728 aa9.47□□□□□ -0.89
YBX3-211ENST00000541351 PDXKO00764 312 aa9.47□□□□□ -0.89
YBX3-211ENST00000541351 PPM1DO15297 605 aa9.47□□□□□ -0.89
YBX3-211ENST00000541351 TOX3O15405 576 aaPredicted RBP9.47□□□□□ -0.89
YBX3-211ENST00000541351 THAP12O43422 761 aa9.47□□□□□ -0.89
YBX3-211ENST00000541351 TMEM63AO94886 807 aa9.47□□□□□ -0.89
YBX3-211ENST00000541351 PAEPP09466 180 aa9.47□□□□□ -0.89
YBX3-211ENST00000541351 FOSL1P15407 271 aa9.47□□□□□ -0.89
YBX3-211ENST00000541351 EPHA4P54764 986 aa9.47□□□□□ -0.89
YBX3-211ENST00000541351 YWHAZP63104 245 aaKnown RBP9.47□□□□□ -0.89
YBX3-211ENST00000541351 CHAF1BQ13112 559 aa9.47□□□□□ -0.89
YBX3-211ENST00000541351 PLEKHN1Q494U1 663 aaPredicted RBP9.47□□□□□ -0.89
YBX3-211ENST00000541351 C5orf22Q49AR2 442 aa9.47□□□□□ -0.89
YBX3-211ENST00000541351 CFAP58Q5T655 872 aa9.47□□□□□ -0.89
YBX3-211ENST00000541351 ANKRD40Q6AI12 368 aa9.47□□□□□ -0.89
YBX3-211ENST00000541351 FCRL6Q6DN72 434 aa9.47□□□□□ -0.89
YBX3-211ENST00000541351 FOXR2Q6PJQ5 311 aa9.47□□□□□ -0.89
YBX3-211ENST00000541351 SKAP1Q86WV1 359 aa9.47□□□□□ -0.89
YBX3-211ENST00000541351 FAM186BQ8IYM0 893 aa9.47□□□□□ -0.89
YBX3-211ENST00000541351 ZADH2Q8N4Q0 377 aa9.47□□□□□ -0.89
YBX3-211ENST00000541351 OR52K2Q8NGK3 314 aa9.47□□□□□ -0.89
YBX3-211ENST00000541351 HCAR2Q8TDS4 363 aa9.47□□□□□ -0.89
YBX3-211ENST00000541351 NCSTNQ92542 709 aa9.47□□□□□ -0.89
YBX3-211ENST00000541351 TM6SF2Q9BZW4 377 aa9.47□□□□□ -0.89
YBX3-211ENST00000541351 BRD8Q9H0E9 1235 aa9.47□□□□□ -0.89
YBX3-211ENST00000541351 ZSCAN16Q9H4T2 348 aaPredicted RBP9.47□□□□□ -0.89
YBX3-211ENST00000541351 MAGEF1Q9HAY2 307 aa9.47□□□□□ -0.89
YBX3-211ENST00000541351 MCCC2Q9HCC0 563 aa9.47□□□□□ -0.89
YBX3-211ENST00000541351 ST7Q9NRC1 585 aa9.47□□□□□ -0.89
YBX3-211ENST00000541351 KBTBD4Q9NVX7 518 aa9.47□□□□□ -0.89
YBX3-211ENST00000541351 DDIT4Q9NX09 232 aa9.47□□□□□ -0.89
YBX3-211ENST00000541351 CFAP69A5D8W1 941 aa9.46□□□□□ -0.9
YBX3-211ENST00000541351 TMEM202A6NGA9 273 aa9.46□□□□□ -0.9
YBX3-211ENST00000541351 CALUO43852 315 aaPredicted RBP9.46□□□□□ -0.9
YBX3-211ENST00000541351 ZNF821O75541 412 aaPredicted RBP9.46□□□□□ -0.9
YBX3-211ENST00000541351 CD2BP2O95400 341 aaKnown RBP9.46□□□□□ -0.9
YBX3-211ENST00000541351 IGLV3-25P01717 112 aa9.46□□□□□ -0.9
YBX3-211ENST00000541351 IGHEP01854 428 aa9.46□□□□□ -0.9
YBX3-211ENST00000541351 NR3C1P04150 777 aa9.46□□□□□ -0.9
YBX3-211ENST00000541351 FYNP06241 537 aa9.46□□□□□ -0.9
YBX3-211ENST00000541351 PLEKP08567 350 aaPredicted RBP9.46□□□□□ -0.9
YBX3-211ENST00000541351 SLC2A4P14672 509 aa9.46□□□□□ -0.9
YBX3-211ENST00000541351 TBXAS1P24557 533 aaPredicted RBP9.46□□□□□ -0.9
YBX3-211ENST00000541351 SRSF11Q05519 484 aaKnown RBP9.46□□□□□ -0.9
YBX3-211ENST00000541351 GRM3Q14832 879 aa9.46□□□□□ -0.9
YBX3-211ENST00000541351 CNGA2Q16280 664 aa9.46□□□□□ -0.9
YBX3-211ENST00000541351 ASIC2Q16515 512 aa9.46□□□□□ -0.9
YBX3-211ENST00000541351 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.46□□□□□ -0.9
YBX3-211ENST00000541351 SYPL2Q5VXT5 272 aa9.46□□□□□ -0.9
YBX3-211ENST00000541351 SLC30A9Q6PML9 568 aa9.46□□□□□ -0.9
YBX3-211ENST00000541351 XKRXQ6PP77 449 aa9.46□□□□□ -0.9
YBX3-211ENST00000541351 IGFL3Q6UXB1 125 aa9.46□□□□□ -0.9
YBX3-211ENST00000541351 PPP1R3BQ86XI6 285 aa9.46□□□□□ -0.9
YBX3-211ENST00000541351 SFTPA2Q8IWL1 248 aa9.46□□□□□ -0.9
YBX3-211ENST00000541351 NAGSQ8N159 534 aa9.46□□□□□ -0.9
YBX3-211ENST00000541351 CCL4L1Q8NHW4 92 aa9.46□□□□□ -0.9
YBX3-211ENST00000541351 CLEC4CQ8WTT0 213 aa9.46□□□□□ -0.9
YBX3-211ENST00000541351 CT55Q8WUE5 264 aa9.46□□□□□ -0.9
YBX3-211ENST00000541351 RELTQ969Z4 430 aa9.46□□□□□ -0.9
YBX3-211ENST00000541351 HMCESQ96FZ2 354 aa9.46□□□□□ -0.9
YBX3-211ENST00000541351 SGSM3Q96HU1 749 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms