RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 PPP1R3AQ16821 1122 aa12.57□□□□□ -0.4
RNF4-222ENST00000541204 ARTNQ5T4W7 220 aa12.57□□□□□ -0.4
RNF4-222ENST00000541204 DENND5AQ6IQ26 1287 aa12.57□□□□□ -0.4
RNF4-222ENST00000541204 TMEM173Q86WV6 379 aaPredicted RBP12.57□□□□□ -0.4
RNF4-222ENST00000541204 CNTN4Q8IWV2 1026 aa12.57□□□□□ -0.4
RNF4-222ENST00000541204 FAM81AQ8TBF8 368 aa12.57□□□□□ -0.4
RNF4-222ENST00000541204 SPPL2BQ8TCT7 592 aa12.57□□□□□ -0.4
RNF4-222ENST00000541204 NOL6Q9H6R4 1146 aaKnown RBP12.57□□□□□ -0.4
RNF4-222ENST00000541204 COQ10BQ9H8M1 238 aa12.57□□□□□ -0.4
RNF4-222ENST00000541204 CCDC167Q9P0B6 97 aa12.57□□□□□ -0.4
RNF4-222ENST00000541204 DMTF1Q9Y222 760 aa12.57□□□□□ -0.4
RNF4-222ENST00000541204 AP4S1Q9Y587 144 aa12.57□□□□□ -0.4
RNF4-222ENST00000541204 NBNO60934 754 aa12.56□□□□□ -0.4
RNF4-222ENST00000541204 ANXA9O76027 345 aa12.56□□□□□ -0.4
RNF4-222ENST00000541204 NELFEP18615 380 aaKnown RBP12.56□□□□□ -0.4
RNF4-222ENST00000541204 KCNA5P22460 613 aa12.56□□□□□ -0.4
RNF4-222ENST00000541204 PCSK6P29122 969 aa12.56□□□□□ -0.4
RNF4-222ENST00000541204 C1QTNF8P60827 252 aa12.56□□□□□ -0.4
RNF4-222ENST00000541204 SLC10A7Q0GE19 358 aa12.56□□□□□ -0.4
RNF4-222ENST00000541204 CSHL1Q14406 222 aa12.56□□□□□ -0.4
RNF4-222ENST00000541204 NFE2Q16621 373 aaPredicted RBP12.56□□□□□ -0.4
RNF4-222ENST00000541204 MS4A13Q5J8X5 152 aa12.56□□□□□ -0.4
RNF4-222ENST00000541204 ZNF470Q6ECI4 717 aa12.56□□□□□ -0.4
RNF4-222ENST00000541204 LRRC8DQ7L1W4 858 aa12.56□□□□□ -0.4
RNF4-222ENST00000541204 STON2Q8WXE9 905 aa12.56□□□□□ -0.4
RNF4-222ENST00000541204 IGSF8Q969P0 613 aa12.56□□□□□ -0.4
RNF4-222ENST00000541204 PSMG2Q969U7 264 aa12.56□□□□□ -0.4
RNF4-222ENST00000541204 TSGA13Q96PP4 275 aa12.56□□□□□ -0.4
RNF4-222ENST00000541204 FCRL5Q96RD9 977 aa12.56□□□□□ -0.4
RNF4-222ENST00000541204 IL12RB2Q99665 862 aa12.56□□□□□ -0.4
RNF4-222ENST00000541204 MRPL57Q9BQC6 102 aaKnown RBP12.56□□□□□ -0.4
RNF4-222ENST00000541204 SLC2A11Q9BYW1 496 aa12.56□□□□□ -0.4
RNF4-222ENST00000541204 HSFX1Q9UBD0 423 aa12.56□□□□□ -0.4
RNF4-222ENST00000541204 SCML2Q9UQR0 700 aa12.56□□□□□ -0.4
RNF4-222ENST00000541204 PCDHB7Q9Y5E2 793 aa12.56□□□□□ -0.4
RNF4-222ENST00000541204 SLC12A8A0AV02 714 aa12.56□□□□□ -0.4
RNF4-222ENST00000541204 H3BSA7 217 aa12.56□□□□□ -0.4
RNF4-222ENST00000541204 AP3B1O00203 1094 aa12.56□□□□□ -0.4
RNF4-222ENST00000541204 FBP2O00757 339 aa12.56□□□□□ -0.4
RNF4-222ENST00000541204 YWHAQP27348 245 aa12.56□□□□□ -0.4
RNF4-222ENST00000541204 CD86P42081 329 aa12.56□□□□□ -0.4
RNF4-222ENST00000541204 RANBP1P43487 201 aa12.56□□□□□ -0.4
RNF4-222ENST00000541204 PLK1P53350 603 aa12.56□□□□□ -0.4
RNF4-222ENST00000541204 DUSP4Q13115 394 aa12.56□□□□□ -0.4
RNF4-222ENST00000541204 NOGQ13253 232 aa12.56□□□□□ -0.4
RNF4-222ENST00000541204 AGKQ53H12 422 aa12.56□□□□□ -0.4
RNF4-222ENST00000541204 CYP2R1Q6VVX0 501 aa12.56□□□□□ -0.4
RNF4-222ENST00000541204 RNF19BQ6ZMZ0 732 aa12.56□□□□□ -0.4
RNF4-222ENST00000541204 TAS1R1Q7RTX1 841 aa12.56□□□□□ -0.4
RNF4-222ENST00000541204 PIWIL4Q7Z3Z4 852 aaKnown RBP12.56□□□□□ -0.4
RNF4-222ENST00000541204 PPHLN1Q8NEY8 458 aaKnown RBP12.56□□□□□ -0.4
RNF4-222ENST00000541204 CCSER2Q9H7U1 834 aa12.56□□□□□ -0.4
RNF4-222ENST00000541204 CACNA2D2Q9NY47 1150 aa12.56□□□□□ -0.4
RNF4-222ENST00000541204 PHF24Q9UPV7 400 aa12.56□□□□□ -0.4
RNF4-222ENST00000541204 TLR6Q9Y2C9 796 aa12.56□□□□□ -0.4
RNF4-222ENST00000541204 RNF11Q9Y3C5 154 aa12.56□□□□□ -0.4
RNF4-222ENST00000541204 SNX13Q9Y5W8 968 aa12.56□□□□□ -0.4
RNF4-222ENST00000541204 MYLKQ15746 1914 aa12.55□□□□□ -0.4
RNF4-222ENST00000541204 PRORSD1PA6NEY8 169 aa12.55□□□□□ -0.4
RNF4-222ENST00000541204 HNRNPRO43390 633 aaKnown RBP12.55□□□□□ -0.4
RNF4-222ENST00000541204 ATP5F1P24539 256 aaPredicted RBP12.55□□□□□ -0.4
RNF4-222ENST00000541204 SLC12A2P55011 1212 aa12.55□□□□□ -0.4
RNF4-222ENST00000541204 WNT3AP56704 352 aa12.55□□□□□ -0.4
RNF4-222ENST00000541204 LRP8Q14114 963 aa12.55□□□□□ -0.4
RNF4-222ENST00000541204 FASTKQ14296 549 aaKnown RBP12.55□□□□□ -0.4
RNF4-222ENST00000541204 USP41Q3LFD5 358 aa12.55□□□□□ -0.4
RNF4-222ENST00000541204 RTP2Q5QGT7 225 aa12.55□□□□□ -0.4
RNF4-222ENST00000541204 RBM20Q5T481 1227 aaKnown RBP12.55□□□□□ -0.4
RNF4-222ENST00000541204 LHX8Q68G74 356 aa12.55□□□□□ -0.4
RNF4-222ENST00000541204 REP15Q6BDI9 236 aa12.55□□□□□ -0.4
RNF4-222ENST00000541204 PRSS55Q6UWB4 352 aaPredicted RBP12.55□□□□□ -0.4
RNF4-222ENST00000541204 LAYNQ6UX15 382 aa12.55□□□□□ -0.4
RNF4-222ENST00000541204 BEND5Q7L4P6 421 aa12.55□□□□□ -0.4
RNF4-222ENST00000541204 CFAP52Q8N1V2 620 aa12.55□□□□□ -0.4
RNF4-222ENST00000541204 LZTR1Q8N653 840 aa12.55□□□□□ -0.4
RNF4-222ENST00000541204 LPGAT1Q92604 370 aa12.55□□□□□ -0.4
RNF4-222ENST00000541204 MYEOVQ96EZ4 313 aa12.55□□□□□ -0.4
RNF4-222ENST00000541204 CAPNS2Q96L46 248 aa12.55□□□□□ -0.4
RNF4-222ENST00000541204 MRGPRX2Q96LB1 330 aa12.55□□□□□ -0.4
RNF4-222ENST00000541204 RPRD1AQ96P16 312 aaPredicted RBP12.55□□□□□ -0.4
RNF4-222ENST00000541204 UNC93B1Q9H1C4 597 aa12.55□□□□□ -0.4
RNF4-222ENST00000541204 FBXO44Q9H4M3 255 aa12.55□□□□□ -0.4
RNF4-222ENST00000541204 UTP6Q9NYH9 597 aaKnown RBP12.55□□□□□ -0.4
RNF4-222ENST00000541204 MARCH2Q9P0N8 246 aa12.55□□□□□ -0.4
RNF4-222ENST00000541204 PCDH10Q9P2E7 1040 aa12.55□□□□□ -0.4
RNF4-222ENST00000541204 SUCOQ9UBS9 1254 aaKnown RBP12.55□□□□□ -0.4
RNF4-222ENST00000541204 ENPP3O14638 875 aa12.55□□□□□ -0.4
RNF4-222ENST00000541204 PSMD3O43242 534 aa12.55□□□□□ -0.4
RNF4-222ENST00000541204 CACNG3O60359 315 aa12.55□□□□□ -0.4
RNF4-222ENST00000541204 TMCC1O94876 653 aa12.55□□□□□ -0.4
RNF4-222ENST00000541204 MT-CO1P00395 513 aa12.55□□□□□ -0.4
RNF4-222ENST00000541204 RPL17P18621 184 aaKnown RBP12.55□□□□□ -0.4
RNF4-222ENST00000541204 DNAJB2P25686 324 aa12.55□□□□□ -0.4
RNF4-222ENST00000541204 HOXC13P31276 330 aa12.55□□□□□ -0.4
RNF4-222ENST00000541204 CD151P48509 253 aa12.55□□□□□ -0.4
RNF4-222ENST00000541204 SLC11A1P49279 550 aa12.55□□□□□ -0.4
RNF4-222ENST00000541204 NR1H2P55055 460 aa12.55□□□□□ -0.4
RNF4-222ENST00000541204 DSC2Q02487 901 aa12.55□□□□□ -0.4
RNF4-222ENST00000541204 MTX3Q5HYI7 312 aa12.55□□□□□ -0.4
RNF4-222ENST00000541204 FBXL22Q6P050 247 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms