RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 GAS8O95995 478 aa18.82■□□□□ 0.6
VPS33A-205ENST00000541169 PAK4O96013 591 aaPredicted RBP18.82■□□□□ 0.6
VPS33A-205ENST00000541169 IFNB1P01574 187 aa18.82■□□□□ 0.6
VPS33A-205ENST00000541169 CFIP05156 583 aa18.82■□□□□ 0.6
VPS33A-205ENST00000541169 PYGLP06737 847 aa18.82■□□□□ 0.6
VPS33A-205ENST00000541169 C6P13671 934 aa18.82■□□□□ 0.6
VPS33A-205ENST00000541169 HNF1BP35680 557 aa18.82■□□□□ 0.6
VPS33A-205ENST00000541169 C21orf59P57076 290 aa18.82■□□□□ 0.6
VPS33A-205ENST00000541169 SPEM2Q0P670 501 aa18.82■□□□□ 0.6
VPS33A-205ENST00000541169 RALGDSQ12967 914 aa18.82■□□□□ 0.6
VPS33A-205ENST00000541169 IHHQ14623 411 aa18.82■□□□□ 0.6
VPS33A-205ENST00000541169 LRRC14Q15048 493 aa18.82■□□□□ 0.6
VPS33A-205ENST00000541169 QPCTQ16769 361 aa18.82■□□□□ 0.6
VPS33A-205ENST00000541169 LRRC73Q5JTD7 316 aa18.82■□□□□ 0.6
VPS33A-205ENST00000541169 ZCCHC9Q8N567 271 aaKnown RBP18.82■□□□□ 0.6
VPS33A-205ENST00000541169 MS4A14Q96JA4 679 aa18.82■□□□□ 0.6
VPS33A-205ENST00000541169 WRAP53Q9BUR4 548 aaKnown RBP18.82■□□□□ 0.6
VPS33A-205ENST00000541169 NPIPB15A6NHN6 443 aaPredicted RBP18.81■□□□□ 0.6
VPS33A-205ENST00000541169 A6NNZ2 444 aa18.81■□□□□ 0.6
VPS33A-205ENST00000541169 CCDC188H7C350 402 aa18.81■□□□□ 0.6
VPS33A-205ENST00000541169 PHF2O75151 1096 aa18.81■□□□□ 0.6
VPS33A-205ENST00000541169 PSMB4P28070 264 aa18.81■□□□□ 0.6
VPS33A-205ENST00000541169 GDF10P55107 478 aa18.81■□□□□ 0.6
VPS33A-205ENST00000541169 YPEL5P62699 121 aa18.81■□□□□ 0.6
VPS33A-205ENST00000541169 SLC1A5Q15758 541 aa18.81■□□□□ 0.6
VPS33A-205ENST00000541169 RANBP10Q6VN20 620 aa18.81■□□□□ 0.6
VPS33A-205ENST00000541169 NLRP8Q86W28 1048 aa18.81■□□□□ 0.6
VPS33A-205ENST00000541169 CREG2Q8IUH2 290 aa18.81■□□□□ 0.6
VPS33A-205ENST00000541169 NRSN1Q8IZ57 195 aa18.81■□□□□ 0.6
VPS33A-205ENST00000541169 CBARPQ8N350 705 aaPredicted RBP18.81■□□□□ 0.6
VPS33A-205ENST00000541169 IPMKQ8NFU5 416 aa18.81■□□□□ 0.6
VPS33A-205ENST00000541169 CENPTQ96BT3 561 aa18.81■□□□□ 0.6
VPS33A-205ENST00000541169 OXNAD1Q96HP4 312 aaPredicted RBP18.81■□□□□ 0.6
VPS33A-205ENST00000541169 MRGPRX2Q96LB1 330 aa18.81■□□□□ 0.6
VPS33A-205ENST00000541169 C19orf43Q9BQ61 176 aa18.81■□□□□ 0.6
VPS33A-205ENST00000541169 ARNT2Q9HBZ2 717 aa18.81■□□□□ 0.6
VPS33A-205ENST00000541169 UBP1Q9NZI7 540 aa18.81■□□□□ 0.6
VPS33A-205ENST00000541169 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.81■□□□□ 0.6
VPS33A-205ENST00000541169 GGT7Q9UJ14 662 aa18.81■□□□□ 0.6
VPS33A-205ENST00000541169 OTOGLQ3ZCN5 2332 aa18.81■□□□□ 0.6
VPS33A-205ENST00000541169 E7EVH7 732 aa18.8■□□□□ 0.6
VPS33A-205ENST00000541169 ARHGAP33O14559 1287 aa18.8■□□□□ 0.6
VPS33A-205ENST00000541169 WNT9AO14904 365 aa18.8■□□□□ 0.6
VPS33A-205ENST00000541169 PPFIA2O75334 1257 aa18.8■□□□□ 0.6
VPS33A-205ENST00000541169 RABIFP47224 123 aa18.8■□□□□ 0.6
VPS33A-205ENST00000541169 ARHGAP8P85298 464 aa18.8■□□□□ 0.6
VPS33A-205ENST00000541169 CDK16Q00536 496 aa18.8■□□□□ 0.6
VPS33A-205ENST00000541169 PDE1BQ01064 536 aa18.8■□□□□ 0.6
VPS33A-205ENST00000541169 TUBB2AQ13885 445 aa18.8■□□□□ 0.6
VPS33A-205ENST00000541169 ACOX1Q15067 660 aa18.8■□□□□ 0.6
VPS33A-205ENST00000541169 ZDHHC20Q5W0Z9 365 aa18.8■□□□□ 0.6
VPS33A-205ENST00000541169 CCDC137Q6PK04 289 aaKnown RBP18.8■□□□□ 0.6
VPS33A-205ENST00000541169 CRTC1Q6UUV9 634 aa18.8■□□□□ 0.6
VPS33A-205ENST00000541169 KYAT3Q6YP21 454 aaKnown RBP18.8■□□□□ 0.6
VPS33A-205ENST00000541169 PRR23CQ6ZRP0 262 aa18.8■□□□□ 0.6
VPS33A-205ENST00000541169 ZNF765Q7L2R6 523 aa18.8■□□□□ 0.6
VPS33A-205ENST00000541169 ABI3BPQ7Z7G0 1075 aa18.8■□□□□ 0.6
VPS33A-205ENST00000541169 OXR1Q8N573 874 aa18.8■□□□□ 0.6
VPS33A-205ENST00000541169 KLHDC7BQ96G42 594 aa18.8■□□□□ 0.6
VPS33A-205ENST00000541169 COQ10AQ96MF6 247 aa18.8■□□□□ 0.6
VPS33A-205ENST00000541169 KLF6Q99612 283 aaPredicted RBP18.8■□□□□ 0.6
VPS33A-205ENST00000541169 TUBB2BQ9BVA1 445 aa18.8■□□□□ 0.6
VPS33A-205ENST00000541169 AP1M1Q9BXS5 423 aa18.8■□□□□ 0.6
VPS33A-205ENST00000541169 ERVMER34-1Q9H9K5 563 aa18.8■□□□□ 0.6
VPS33A-205ENST00000541169 EBF2Q9HAK2 575 aa18.8■□□□□ 0.6
VPS33A-205ENST00000541169 ZFYVE1Q9HBF4 777 aa18.8■□□□□ 0.6
VPS33A-205ENST00000541169 ATXN2Q99700 1313 aaKnown RBP18.79■□□□□ 0.6
VPS33A-205ENST00000541169 C1orf232A0A0U1RR37 186 aa18.79■□□□□ 0.6
VPS33A-205ENST00000541169 TLR4O00206 839 aa18.79■□□□□ 0.6
VPS33A-205ENST00000541169 ZNF185O15231 689 aa18.79■□□□□ 0.6
VPS33A-205ENST00000541169 YKT6O15498 198 aa18.79■□□□□ 0.6
VPS33A-205ENST00000541169 RECQL5O94762 991 aaPredicted RBP18.79■□□□□ 0.6
VPS33A-205ENST00000541169 AP2A1O95782 977 aa18.79■□□□□ 0.6
VPS33A-205ENST00000541169 CER1O95813 267 aa18.79■□□□□ 0.6
VPS33A-205ENST00000541169 ALPIP09923 528 aa18.79■□□□□ 0.6
VPS33A-205ENST00000541169 CTPS1P17812 591 aa18.79■□□□□ 0.6
VPS33A-205ENST00000541169 SDHBP21912 280 aa18.79■□□□□ 0.6
VPS33A-205ENST00000541169 TEAD1P28347 426 aa18.79■□□□□ 0.6
VPS33A-205ENST00000541169 ADRA1AP35348 466 aa18.79■□□□□ 0.6
VPS33A-205ENST00000541169 COILP38432 576 aaPredicted RBP18.79■□□□□ 0.6
VPS33A-205ENST00000541169 ATXN3P54252 364 aaPredicted RBP18.79■□□□□ 0.6
VPS33A-205ENST00000541169 DPTQ07507 201 aa18.79■□□□□ 0.6
VPS33A-205ENST00000541169 MTM1Q13496 603 aa18.79■□□□□ 0.6
VPS33A-205ENST00000541169 LAMB3Q13751 1172 aa18.79■□□□□ 0.6
VPS33A-205ENST00000541169 PTK2BQ14289 1009 aa18.79■□□□□ 0.6
VPS33A-205ENST00000541169 FGL2Q14314 439 aa18.79■□□□□ 0.6
VPS33A-205ENST00000541169 GALNT3Q14435 633 aa18.79■□□□□ 0.6
VPS33A-205ENST00000541169 CNGA3Q16281 694 aa18.79■□□□□ 0.6
VPS33A-205ENST00000541169 SIRPB2Q5JXA9 342 aa18.79■□□□□ 0.6
VPS33A-205ENST00000541169 LRRC66Q68CR7 880 aa18.79■□□□□ 0.6
VPS33A-205ENST00000541169 KCTD11Q693B1 232 aa18.79■□□□□ 0.6
VPS33A-205ENST00000541169 SYT10Q6XYQ8 523 aa18.79■□□□□ 0.6
VPS33A-205ENST00000541169 SLCO2A1Q92959 643 aa18.79■□□□□ 0.6
VPS33A-205ENST00000541169 SLC6A18Q96N87 628 aa18.79■□□□□ 0.6
VPS33A-205ENST00000541169 EIF2B3Q9NR50 452 aaKnown RBP18.79■□□□□ 0.6
VPS33A-205ENST00000541169 PKD2L2Q9NZM6 624 aa18.79■□□□□ 0.6
VPS33A-205ENST00000541169 ANKRD6Q9Y2G4 727 aa18.79■□□□□ 0.6
VPS33A-205ENST00000541169 PLXNA2O75051 1894 aa18.78■□□□□ 0.6
VPS33A-205ENST00000541169 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.78■□□□□ 0.6
VPS33A-205ENST00000541169 A0A1W2PR77 199 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms