RNA–Protein interactions for RNA: ENST00000540797.5

USP3-204, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2 BASIC

Gene USP3, Length 5,474 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-204ENST00000540797 POLMQ9NP87 494 aaPredicted RBP14.14□□□□□ -0.15
USP3-204ENST00000540797 KCTD5Q9NXV2 234 aa14.14□□□□□ -0.15
USP3-204ENST00000540797 FZD10Q9ULW2 581 aa14.14□□□□□ -0.15
USP3-204ENST00000540797 COQ4Q9Y3A0 265 aa14.14□□□□□ -0.15
USP3-204ENST00000540797 M0R2N6 131 aa14.14□□□□□ -0.15
USP3-204ENST00000540797 NTRK1P04629 796 aa14.14□□□□□ -0.15
USP3-204ENST00000540797 FSHRP23945 695 aa14.14□□□□□ -0.15
USP3-204ENST00000540797 CRATP43155 626 aa14.14□□□□□ -0.15
USP3-204ENST00000540797 FGD3Q5JSP0 725 aa14.14□□□□□ -0.15
USP3-204ENST00000540797 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.14□□□□□ -0.15
USP3-204ENST00000540797 CLEC20AQ6ZU45 233 aa14.14□□□□□ -0.15
USP3-204ENST00000540797 PLEKHM3Q6ZWE6 761 aa14.14□□□□□ -0.15
USP3-204ENST00000540797 RHOJQ9H4E5 214 aa14.14□□□□□ -0.15
USP3-204ENST00000540797 CACNA1FO60840 1977 aa14.14□□□□□ -0.15
USP3-204ENST00000540797 DNM1LO00429 736 aa14.14□□□□□ -0.15
USP3-204ENST00000540797 CD48P09326 243 aa14.14□□□□□ -0.15
USP3-204ENST00000540797 PKMP14618 531 aaKnown RBP14.14□□□□□ -0.15
USP3-204ENST00000540797 RXRGP48443 463 aa14.14□□□□□ -0.15
USP3-204ENST00000540797 CACNG1Q06432 222 aa14.14□□□□□ -0.15
USP3-204ENST00000540797 RNF148Q8N7C7 305 aa14.14□□□□□ -0.15
USP3-204ENST00000540797 STYXQ8WUJ0 223 aa14.14□□□□□ -0.15
USP3-204ENST00000540797 GFM2Q969S9 779 aaKnown RBP14.14□□□□□ -0.15
USP3-204ENST00000540797 MRPL48Q96GC5 212 aaKnown RBP14.14□□□□□ -0.15
USP3-204ENST00000540797 SMAD5Q99717 465 aaKnown RBP14.14□□□□□ -0.15
USP3-204ENST00000540797 ABCB8Q9NUT2 735 aa14.14□□□□□ -0.15
USP3-204ENST00000540797 BTRCQ9Y297 605 aa14.14□□□□□ -0.15
USP3-204ENST00000540797 H3BM21 787 aa14.13□□□□□ -0.15
USP3-204ENST00000540797 CCNDBP1O95273 360 aa14.13□□□□□ -0.15
USP3-204ENST00000540797 IL10RBQ08334 325 aa14.13□□□□□ -0.15
USP3-204ENST00000540797 TRMT5Q32P41 509 aaKnown RBP14.13□□□□□ -0.15
USP3-204ENST00000540797 LEMD2Q8NC56 503 aa14.13□□□□□ -0.15
USP3-204ENST00000540797 CLEC4CQ8WTT0 213 aa14.13□□□□□ -0.15
USP3-204ENST00000540797 ZNF516Q92618 1163 aa14.13□□□□□ -0.15
USP3-204ENST00000540797 SLC9A7Q96T83 725 aa14.13□□□□□ -0.15
USP3-204ENST00000540797 NMUR1Q9HB89 426 aa14.13□□□□□ -0.15
USP3-204ENST00000540797 FANCEQ9HB96 536 aa14.13□□□□□ -0.15
USP3-204ENST00000540797 FKBP6O75344 327 aa14.13□□□□□ -0.15
USP3-204ENST00000540797 VIPP01282 170 aa14.13□□□□□ -0.15
USP3-204ENST00000540797 CHRNB2P17787 502 aa14.13□□□□□ -0.15
USP3-204ENST00000540797 TCHHL1Q5QJ38 904 aaPredicted RBP14.13□□□□□ -0.15
USP3-204ENST00000540797 SCIMPQ6UWF3 145 aa14.13□□□□□ -0.15
USP3-204ENST00000540797 VN1R5Q7Z5H4 357 aa14.13□□□□□ -0.15
USP3-204ENST00000540797 GALNT13Q8IUC8 556 aa14.13□□□□□ -0.15
USP3-204ENST00000540797 UTP15Q8TED0 518 aaKnown RBP14.13□□□□□ -0.15
USP3-204ENST00000540797 CLP1Q92989 425 aaKnown RBP14.13□□□□□ -0.15
USP3-204ENST00000540797 UGT2B28Q9BY64 529 aa14.13□□□□□ -0.15
USP3-204ENST00000540797 CAB39LQ9H9S4 337 aa14.13□□□□□ -0.15
USP3-204ENST00000540797 PCDH12Q9NPG4 1184 aa14.13□□□□□ -0.15
USP3-204ENST00000540797 TMEM216Q9P0N5 145 aa14.13□□□□□ -0.15
USP3-204ENST00000540797 SAC3D1A6NKF1 404 aa14.13□□□□□ -0.15
USP3-204ENST00000540797 RASGRP1O95267 797 aa14.13□□□□□ -0.15
USP3-204ENST00000540797 EPORP19235 508 aa14.13□□□□□ -0.15
USP3-204ENST00000540797 RPL3P39023 403 aaKnown RBP14.13□□□□□ -0.15
USP3-204ENST00000540797 RPL38P63173 70 aaKnown RBP14.13□□□□□ -0.15
USP3-204ENST00000540797 PARGQ86W56 976 aa14.13□□□□□ -0.15
USP3-204ENST00000540797 PTCD2Q8WV60 388 aaKnown RBP14.13□□□□□ -0.15
USP3-204ENST00000540797 GLMNQ92990 594 aa14.13□□□□□ -0.15
USP3-204ENST00000540797 PSMG2Q969U7 264 aa14.13□□□□□ -0.15
USP3-204ENST00000540797 CD84Q9UIB8 345 aa14.13□□□□□ -0.15
USP3-204ENST00000540797 AP3M1Q9Y2T2 418 aa14.13□□□□□ -0.15
USP3-204ENST00000540797 GSTA3Q16772 222 aa14.13□□□□□ -0.15
USP3-204ENST00000540797 SLC35G1Q2M3R5 365 aa14.13□□□□□ -0.15
USP3-204ENST00000540797 SAMD4BQ5PRF9 694 aaKnown RBP14.13□□□□□ -0.15
USP3-204ENST00000540797 TMEM154Q6P9G4 183 aa14.13□□□□□ -0.15
USP3-204ENST00000540797 VITQ6UXI7 678 aa14.13□□□□□ -0.15
USP3-204ENST00000540797 C17orf64Q86WR6 236 aa14.13□□□□□ -0.15
USP3-204ENST00000540797 TNS4Q8IZW8 715 aa14.13□□□□□ -0.15
USP3-204ENST00000540797 RASGEF1CQ8N431 466 aa14.13□□□□□ -0.15
USP3-204ENST00000540797 ERVK-5Q9HDB9 667 aa14.13□□□□□ -0.15
USP3-204ENST00000540797 HMGXB4Q9UGU5 601 aa14.13□□□□□ -0.15
USP3-204ENST00000540797 AP2A1O95782 977 aa14.12□□□□□ -0.15
USP3-204ENST00000540797 UMPSP11172 480 aa14.12□□□□□ -0.15
USP3-204ENST00000540797 UQCRBP14927 111 aa14.12□□□□□ -0.15
USP3-204ENST00000540797 LIPMQ5VYY2 423 aa14.12□□□□□ -0.15
USP3-204ENST00000540797 ICE2Q659A1 982 aa14.12□□□□□ -0.15
USP3-204ENST00000540797 CAPRIN2Q6IMN6 1127 aaKnown RBP14.12□□□□□ -0.15
USP3-204ENST00000540797 CAPN13Q6MZZ7 669 aaPredicted RBP14.12□□□□□ -0.15
USP3-204ENST00000540797 CYB5D1Q6P9G0 228 aa14.12□□□□□ -0.15
USP3-204ENST00000540797 CERS6Q6ZMG9 384 aa14.12□□□□□ -0.15
USP3-204ENST00000540797 APTXQ7Z2E3 356 aaKnown RBP14.12□□□□□ -0.15
USP3-204ENST00000540797 DSELQ8IZU8 1212 aa14.12□□□□□ -0.15
USP3-204ENST00000540797 SPATA22Q8NHS9 363 aa14.12□□□□□ -0.15
USP3-204ENST00000540797 PRCCQ92733 491 aaPredicted RBP14.12□□□□□ -0.15
USP3-204ENST00000540797 RNF145Q96MT1 663 aa14.12□□□□□ -0.15
USP3-204ENST00000540797 CDRT15Q96T59 188 aa14.12□□□□□ -0.15
USP3-204ENST00000540797 BTBD10Q9BSF8 475 aa14.12□□□□□ -0.15
USP3-204ENST00000540797 BDH2Q9BUT1 245 aa14.12□□□□□ -0.15
USP3-204ENST00000540797 OR10H1Q9Y4A9 318 aa14.12□□□□□ -0.15
USP3-204ENST00000540797 DLG5Q8TDM6 1919 aa14.12□□□□□ -0.15
USP3-204ENST00000540797 FSBPO95073 299 aa14.12□□□□□ -0.15
USP3-204ENST00000540797 ME2P23368 584 aa14.12□□□□□ -0.15
USP3-204ENST00000540797 COPZ1P61923 177 aa14.12□□□□□ -0.15
USP3-204ENST00000540797 CMC1Q7Z7K0 106 aa14.12□□□□□ -0.15
USP3-204ENST00000540797 TLR6Q9Y2C9 796 aa14.12□□□□□ -0.15
USP3-204ENST00000540797 ADGRA3Q8IWK6 1321 aa14.12□□□□□ -0.15
USP3-204ENST00000540797 TRBV23OR9-2A0A075B6M9 112 aa14.12□□□□□ -0.15
USP3-204ENST00000540797 DEAF1O75398 565 aaPredicted RBP14.12□□□□□ -0.15
USP3-204ENST00000540797 ACADSP16219 412 aa14.12□□□□□ -0.15
USP3-204ENST00000540797 PSMC3P17980 439 aa14.12□□□□□ -0.15
USP3-204ENST00000540797 LRPAP1P30533 357 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms