RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 POLR3BQ9NW08 1133 aaPredicted RBP24.61■■□□□ 1.53
TTC3-225ENST00000540756 NSMCE4AQ9NXX6 385 aa24.61■■□□□ 1.53
TTC3-225ENST00000540756 NDUFAB1O14561 156 aa24.61■■□□□ 1.53
TTC3-225ENST00000540756 TIMM44O43615 452 aa24.61■■□□□ 1.53
TTC3-225ENST00000540756 VIMP08670 466 aaKnown RBP24.61■■□□□ 1.53
TTC3-225ENST00000540756 MAGEA12P43365 314 aa24.61■■□□□ 1.53
TTC3-225ENST00000540756 IRF9Q00978 393 aa24.61■■□□□ 1.53
TTC3-225ENST00000540756 SULT2A1Q06520 285 aa24.61■■□□□ 1.53
TTC3-225ENST00000540756 DMC1Q14565 340 aa24.61■■□□□ 1.53
TTC3-225ENST00000540756 SEPT7Q16181 437 aaKnown RBP24.61■■□□□ 1.53
TTC3-225ENST00000540756 PTPRNQ16849 979 aa24.61■■□□□ 1.53
TTC3-225ENST00000540756 SLC41A1Q8IVJ1 513 aa24.61■■□□□ 1.53
TTC3-225ENST00000540756 TTC30BQ8N4P2 665 aa24.61■■□□□ 1.53
TTC3-225ENST00000540756 ZNF366Q8N895 744 aa24.61■■□□□ 1.53
TTC3-225ENST00000540756 NXPE3Q969Y0 559 aa24.61■■□□□ 1.53
TTC3-225ENST00000540756 ISL2Q96A47 359 aa24.61■■□□□ 1.53
TTC3-225ENST00000540756 MAGEB18Q96M61 343 aa24.61■■□□□ 1.53
TTC3-225ENST00000540756 RPP25Q9BUL9 199 aaKnown RBP24.61■■□□□ 1.53
TTC3-225ENST00000540756 PRO3102Q9H379 93 aa24.61■■□□□ 1.53
TTC3-225ENST00000540756 ZDHHC6Q9H6R6 413 aa24.61■■□□□ 1.53
TTC3-225ENST00000540756 NLE1Q9NVX2 485 aaPredicted RBP24.61■■□□□ 1.53
TTC3-225ENST00000540756 CLDND1Q9NY35 253 aa24.61■■□□□ 1.53
TTC3-225ENST00000540756 FNDC3AQ9Y2H6 1198 aaKnown RBP24.61■■□□□ 1.53
TTC3-225ENST00000540756 A8MX80 341 aa24.6■■□□□ 1.53
TTC3-225ENST00000540756 PRRT4C9JH25 899 aa24.6■■□□□ 1.53
TTC3-225ENST00000540756 FAM107AO95990 144 aa24.6■■□□□ 1.53
TTC3-225ENST00000540756 TAC1P20366 129 aa24.6■■□□□ 1.53
TTC3-225ENST00000540756 CRHR1P34998 444 aa24.6■■□□□ 1.53
TTC3-225ENST00000540756 ZNF460Q14592 562 aa24.6■■□□□ 1.53
TTC3-225ENST00000540756 CARD16Q5EG05 197 aa24.6■■□□□ 1.53
TTC3-225ENST00000540756 PLD6Q8N2A8 252 aaKnown RBP24.6■■□□□ 1.53
TTC3-225ENST00000540756 ZNF557Q8N988 423 aaPredicted RBP24.6■■□□□ 1.53
TTC3-225ENST00000540756 ZNF473Q8WTR7 871 aaKnown RBP24.6■■□□□ 1.53
TTC3-225ENST00000540756 NDNQ99608 321 aa24.6■■□□□ 1.53
TTC3-225ENST00000540756 IQCGQ9H095 443 aaKnown RBP24.6■■□□□ 1.53
TTC3-225ENST00000540756 ATP13A3Q9H7F0 1226 aa24.6■■□□□ 1.53
TTC3-225ENST00000540756 GTSE1Q9NYZ3 720 aa24.6■■□□□ 1.53
TTC3-225ENST00000540756 COL4A3Q01955 1670 aa24.6■■□□□ 1.53
TTC3-225ENST00000540756 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP24.59■■□□□ 1.53
TTC3-225ENST00000540756 ANTXRLA6NF34 631 aa24.59■■□□□ 1.53
TTC3-225ENST00000540756 C2orf81A6NN90 581 aa24.59■■□□□ 1.53
TTC3-225ENST00000540756 SRRM3A6NNA2 597 aaPredicted RBP24.59■■□□□ 1.53
TTC3-225ENST00000540756 NFATC1O95644 943 aa24.59■■□□□ 1.53
TTC3-225ENST00000540756 DHRS4L1P0CG22 281 aa24.59■■□□□ 1.53
TTC3-225ENST00000540756 LTBRP36941 435 aa24.59■■□□□ 1.53
TTC3-225ENST00000540756 CCT5P48643 541 aa24.59■■□□□ 1.53
TTC3-225ENST00000540756 SERPINB8P50452 374 aa24.59■■□□□ 1.53
TTC3-225ENST00000540756 IRX4P78413 519 aa24.59■■□□□ 1.53
TTC3-225ENST00000540756 ZKSCAN8Q15776 578 aaPredicted RBP24.59■■□□□ 1.53
TTC3-225ENST00000540756 RBM20Q5T481 1227 aaKnown RBP24.59■■□□□ 1.53
TTC3-225ENST00000540756 PARM1Q6UWI2 310 aa24.59■■□□□ 1.53
TTC3-225ENST00000540756 LYSMD3Q7Z3D4 306 aa24.59■■□□□ 1.53
TTC3-225ENST00000540756 PAF1Q8N7H5 531 aa24.59■■□□□ 1.53
TTC3-225ENST00000540756 ARMC2Q8NEN0 867 aa24.59■■□□□ 1.53
TTC3-225ENST00000540756 OR2A12Q8NGT7 310 aa24.59■■□□□ 1.53
TTC3-225ENST00000540756 FRS2Q8WU20 508 aa24.59■■□□□ 1.53
TTC3-225ENST00000540756 FGF14Q92915 247 aa24.59■■□□□ 1.53
TTC3-225ENST00000540756 MKS1Q9NXB0 559 aa24.59■■□□□ 1.53
TTC3-225ENST00000540756 EMCNQ9ULC0 261 aa24.59■■□□□ 1.53
TTC3-225ENST00000540756 CXorf51AA0A1B0GTR3 108 aa24.59■■□□□ 1.53
TTC3-225ENST00000540756 PHGDHO43175 533 aaKnown RBP24.59■■□□□ 1.53
TTC3-225ENST00000540756 HOXB8P17481 243 aaPredicted RBP24.59■■□□□ 1.53
TTC3-225ENST00000540756 GRIA4P48058 902 aa24.59■■□□□ 1.53
TTC3-225ENST00000540756 LAMB3Q13751 1172 aa24.59■■□□□ 1.53
TTC3-225ENST00000540756 CEP97Q8IW35 865 aa24.59■■□□□ 1.53
TTC3-225ENST00000540756 PCDH20Q8N6Y1 951 aaKnown RBP24.59■■□□□ 1.53
TTC3-225ENST00000540756 ACMSDQ8TDX5 336 aa24.59■■□□□ 1.53
TTC3-225ENST00000540756 PEX13Q92968 403 aa24.59■■□□□ 1.53
TTC3-225ENST00000540756 MECRQ9BV79 373 aa24.59■■□□□ 1.53
TTC3-225ENST00000540756 CEP44Q9C0F1 390 aa24.59■■□□□ 1.53
TTC3-225ENST00000540756 TTYH1Q9H313 450 aaPredicted RBP24.59■■□□□ 1.53
TTC3-225ENST00000540756 ZNF711Q9Y462 761 aa24.59■■□□□ 1.53
TTC3-225ENST00000540756 CD3EAPO15446 510 aaKnown RBP24.58■■□□□ 1.53
TTC3-225ENST00000540756 S1PR4O95977 384 aa24.58■■□□□ 1.53
TTC3-225ENST00000540756 GSRP00390 522 aa24.58■■□□□ 1.53
TTC3-225ENST00000540756 LPOP22079 712 aaPredicted RBP24.58■■□□□ 1.53
TTC3-225ENST00000540756 CD151P48509 253 aa24.58■■□□□ 1.53
TTC3-225ENST00000540756 CDKN1CP49918 316 aaPredicted RBP24.58■■□□□ 1.53
TTC3-225ENST00000540756 KDSRQ06136 332 aa24.58■■□□□ 1.53
TTC3-225ENST00000540756 USP10Q14694 798 aaKnown RBP24.58■■□□□ 1.53
TTC3-225ENST00000540756 GRIN2CQ14957 1233 aa24.58■■□□□ 1.53
TTC3-225ENST00000540756 UGP2Q16851 508 aa24.58■■□□□ 1.53
TTC3-225ENST00000540756 CES5AQ6NT32 575 aa24.58■■□□□ 1.53
TTC3-225ENST00000540756 KIAA1958Q8N8K9 716 aa24.58■■□□□ 1.53
TTC3-225ENST00000540756 GPATCH11Q8N954 259 aa24.58■■□□□ 1.53
TTC3-225ENST00000540756 OR4L1Q8NH43 312 aa24.58■■□□□ 1.53
TTC3-225ENST00000540756 GRIN3AQ8TCU5 1115 aa24.58■■□□□ 1.53
TTC3-225ENST00000540756 CALML6Q8TD86 181 aa24.58■■□□□ 1.53
TTC3-225ENST00000540756 POMKQ9H5K3 350 aa24.58■■□□□ 1.53
TTC3-225ENST00000540756 FGFR1OP2Q9NVK5 253 aa24.58■■□□□ 1.53
TTC3-225ENST00000540756 OBP2AQ9NY56 170 aa24.58■■□□□ 1.53
TTC3-225ENST00000540756 FKBPLQ9UIM3 349 aa24.58■■□□□ 1.53
TTC3-225ENST00000540756 A0A096LPK6 155 aa24.57■■□□□ 1.52
TTC3-225ENST00000540756 FAM95CA0A1B0GW59 222 aa24.57■■□□□ 1.52
TTC3-225ENST00000540756 SOCS5O75159 536 aa24.57■■□□□ 1.52
TTC3-225ENST00000540756 UGT2B4P06133 528 aa24.57■■□□□ 1.52
TTC3-225ENST00000540756 C2P06681 752 aa24.57■■□□□ 1.52
TTC3-225ENST00000540756 SERPINA4P29622 427 aa24.57■■□□□ 1.52
TTC3-225ENST00000540756 HNF1BP35680 557 aa24.57■■□□□ 1.52
TTC3-225ENST00000540756 MAPK8P45983 427 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms