RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 LRIT1Q9P2V4 623 aa7.34□□□□□ -1.23
YBX3-209ENST00000540747 DAAM1Q9Y4D1 1078 aa7.34□□□□□ -1.23
YBX3-209ENST00000540747 ST14Q9Y5Y6 855 aa7.34□□□□□ -1.23
YBX3-209ENST00000540747 ANKRD36A6QL64 1941 aa7.33□□□□□ -1.24
YBX3-209ENST00000540747 LRBAP50851 2863 aa7.33□□□□□ -1.24
YBX3-209ENST00000540747 DOPEY1Q5JWR5 2465 aa7.33□□□□□ -1.24
YBX3-209ENST00000540747 ICE1Q9Y2F5 2266 aa7.33□□□□□ -1.24
YBX3-209ENST00000540747 IGHV5-10-1A0A0J9YXX1 117 aa7.33□□□□□ -1.24
YBX3-209ENST00000540747 B4DGG1 531 aa7.33□□□□□ -1.24
YBX3-209ENST00000540747 STMND1H3BQB6 276 aa7.33□□□□□ -1.24
YBX3-209ENST00000540747 TRAFD1O14545 582 aaPredicted RBP7.33□□□□□ -1.24
YBX3-209ENST00000540747 PRAMEF11O60813 436 aa7.33□□□□□ -1.24
YBX3-209ENST00000540747 RECQL5O94762 991 aaPredicted RBP7.33□□□□□ -1.24
YBX3-209ENST00000540747 PRKCGP05129 697 aa7.33□□□□□ -1.24
YBX3-209ENST00000540747 PCCBP05166 539 aa7.33□□□□□ -1.24
YBX3-209ENST00000540747 FGF1P05230 155 aa7.33□□□□□ -1.24
YBX3-209ENST00000540747 UNGP13051 313 aaPredicted RBP7.33□□□□□ -1.24
YBX3-209ENST00000540747 GP1BBP13224 206 aa7.33□□□□□ -1.24
YBX3-209ENST00000540747 CR2P20023 1033 aa7.33□□□□□ -1.24
YBX3-209ENST00000540747 CD1CP29017 333 aa7.33□□□□□ -1.24
YBX3-209ENST00000540747 CSF2RBP32927 897 aa7.33□□□□□ -1.24
YBX3-209ENST00000540747 RFC1P35251 1148 aaPredicted RBP7.33□□□□□ -1.24
YBX3-209ENST00000540747 CASRP41180 1078 aa7.33□□□□□ -1.24
YBX3-209ENST00000540747 STAT1P42224 750 aa7.33□□□□□ -1.24
YBX3-209ENST00000540747 MTIF2P46199 727 aaKnown RBP7.33□□□□□ -1.24
YBX3-209ENST00000540747 LIMK2P53671 638 aa7.33□□□□□ -1.24
YBX3-209ENST00000540747 MAPK10P53779 464 aa7.33□□□□□ -1.24
YBX3-209ENST00000540747 MAZP56270 477 aaKnown RBP7.33□□□□□ -1.24
YBX3-209ENST00000540747 POLE2P56282 527 aa7.33□□□□□ -1.24
YBX3-209ENST00000540747 KCNAB2Q13303 367 aa7.33□□□□□ -1.24
YBX3-209ENST00000540747 TRA2AQ13595 282 aaKnown RBP eCLIP7.33□□□□□ -1.24
YBX3-209ENST00000540747 RAPGEF1Q13905 1077 aa7.33□□□□□ -1.24
YBX3-209ENST00000540747 GRM3Q14832 879 aa7.33□□□□□ -1.24
YBX3-209ENST00000540747 CDO1Q16878 200 aa7.33□□□□□ -1.24
YBX3-209ENST00000540747 VWA3BQ502W6 1294 aa7.33□□□□□ -1.24
YBX3-209ENST00000540747 BORAQ6PGQ7 559 aa7.33□□□□□ -1.24
YBX3-209ENST00000540747 DPPA4Q7L190 304 aa7.33□□□□□ -1.24
YBX3-209ENST00000540747 TAF8Q7Z7C8 310 aa7.33□□□□□ -1.24
YBX3-209ENST00000540747 ZNF677Q86XU0 584 aa7.33□□□□□ -1.24
YBX3-209ENST00000540747 DNAAF5Q86Y56 855 aa7.33□□□□□ -1.24
YBX3-209ENST00000540747 CAMK1DQ8IU85 385 aa7.33□□□□□ -1.24
YBX3-209ENST00000540747 CBARPQ8N350 705 aaPredicted RBP7.33□□□□□ -1.24
YBX3-209ENST00000540747 BMPERQ8N8U9 685 aa7.33□□□□□ -1.24
YBX3-209ENST00000540747 ZSCAN1Q8NBB4 408 aa7.33□□□□□ -1.24
YBX3-209ENST00000540747 MSANTD4Q8NCY6 345 aa7.33□□□□□ -1.24
YBX3-209ENST00000540747 FAM172AQ8WUF8 416 aa7.33□□□□□ -1.24
YBX3-209ENST00000540747 COQ10AQ96MF6 247 aa7.33□□□□□ -1.24
YBX3-209ENST00000540747 PSMG3-AS1Q96PY0 264 aa7.33□□□□□ -1.24
YBX3-209ENST00000540747 TAAR9Q96RI9 348 aa7.33□□□□□ -1.24
YBX3-209ENST00000540747 DDA1Q9BW61 102 aa7.33□□□□□ -1.24
YBX3-209ENST00000540747 STK33Q9BYT3 514 aa7.33□□□□□ -1.24
YBX3-209ENST00000540747 FRMD8Q9BZ67 464 aaPredicted RBP7.33□□□□□ -1.24
YBX3-209ENST00000540747 GANQ9H2C0 597 aa7.33□□□□□ -1.24
YBX3-209ENST00000540747 RDH14Q9HBH5 336 aa7.33□□□□□ -1.24
YBX3-209ENST00000540747 SPATS2LQ9NUQ6 558 aaKnown RBP7.33□□□□□ -1.24
YBX3-209ENST00000540747 KIAA1468Q9P260 1216 aa7.33□□□□□ -1.24
YBX3-209ENST00000540747 PDP2Q9P2J9 529 aa7.33□□□□□ -1.24
YBX3-209ENST00000540747 ABCA12Q86UK0 2595 aa7.33□□□□□ -1.24
YBX3-209ENST00000540747 PRSS38A1L453 326 aa7.32□□□□□ -1.24
YBX3-209ENST00000540747 B4E171 279 aa7.32□□□□□ -1.24
YBX3-209ENST00000540747 J3KR12 359 aa7.32□□□□□ -1.24
YBX3-209ENST00000540747 CACNB4O00305 520 aaPredicted RBP7.32□□□□□ -1.24
YBX3-209ENST00000540747 CEACAM5P06731 702 aa7.32□□□□□ -1.24
YBX3-209ENST00000540747 THRAP10827 490 aa7.32□□□□□ -1.24
YBX3-209ENST00000540747 CCNB1P14635 433 aa7.32□□□□□ -1.24
YBX3-209ENST00000540747 LIFP15018 202 aa7.32□□□□□ -1.24
YBX3-209ENST00000540747 KELP23276 732 aa7.32□□□□□ -1.24
YBX3-209ENST00000540747 EPHB2P29323 1055 aa7.32□□□□□ -1.24
YBX3-209ENST00000540747 UGT1A3P35503 534 aa7.32□□□□□ -1.24
YBX3-209ENST00000540747 TSPAN7P41732 249 aa7.32□□□□□ -1.24
YBX3-209ENST00000540747 GPR3P46089 330 aa7.32□□□□□ -1.24
YBX3-209ENST00000540747 JAM2P57087 298 aa7.32□□□□□ -1.24
YBX3-209ENST00000540747 OR1D5P58170 312 aa7.32□□□□□ -1.24
YBX3-209ENST00000540747 CDR2Q01850 454 aa7.32□□□□□ -1.24
YBX3-209ENST00000540747 ARHGEF7Q14155 803 aa7.32□□□□□ -1.24
YBX3-209ENST00000540747 SKIDA1Q1XH10 827 aa7.32□□□□□ -1.24
YBX3-209ENST00000540747 MAP9Q49MG5 647 aa7.32□□□□□ -1.24
YBX3-209ENST00000540747 PPP1R15BQ5SWA1 713 aa7.32□□□□□ -1.24
YBX3-209ENST00000540747 PHF19Q5T6S3 580 aa7.32□□□□□ -1.24
YBX3-209ENST00000540747 ERAP2Q6P179 960 aa7.32□□□□□ -1.24
YBX3-209ENST00000540747 PNCKQ6P2M8 343 aa7.32□□□□□ -1.24
YBX3-209ENST00000540747 WDR59Q6PJI9 974 aa7.32□□□□□ -1.24
YBX3-209ENST00000540747 SRLQ86TD4 932 aa7.32□□□□□ -1.24
YBX3-209ENST00000540747 PIM3Q86V86 326 aa7.32□□□□□ -1.24
YBX3-209ENST00000540747 ARHGAP12Q8IWW6 846 aa7.32□□□□□ -1.24
YBX3-209ENST00000540747 RCBTB1Q8NDN9 531 aa7.32□□□□□ -1.24
YBX3-209ENST00000540747 OR4D9Q8NGE8 314 aa7.32□□□□□ -1.24
YBX3-209ENST00000540747 KIAA1524Q8TCG1 905 aa7.32□□□□□ -1.24
YBX3-209ENST00000540747 PTCD2Q8WV60 388 aaKnown RBP7.32□□□□□ -1.24
YBX3-209ENST00000540747 TRIM44Q96DX7 344 aaPredicted RBP7.32□□□□□ -1.24
YBX3-209ENST00000540747 SCARF2Q96GP6 870 aaPredicted RBP7.32□□□□□ -1.24
YBX3-209ENST00000540747 SLC45A3Q96JT2 553 aa7.32□□□□□ -1.24
YBX3-209ENST00000540747 CCDC74BQ96LY2 380 aa7.32□□□□□ -1.24
YBX3-209ENST00000540747 PCDHB18PQ96TA0 734 aa7.32□□□□□ -1.24
YBX3-209ENST00000540747 C11orf70Q9BRQ4 267 aa7.32□□□□□ -1.24
YBX3-209ENST00000540747 TUBGCP2Q9BSJ2 902 aa7.32□□□□□ -1.24
YBX3-209ENST00000540747 TEX101Q9BY14 249 aa7.32□□□□□ -1.24
YBX3-209ENST00000540747 PDCL3Q9H2J4 239 aa7.32□□□□□ -1.24
YBX3-209ENST00000540747 WDR26Q9H7D7 661 aa7.32□□□□□ -1.24
YBX3-209ENST00000540747 CYP4F12Q9HCS2 524 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 6715.5 ms