RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 GOLGA6CA6NDK9 693 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 GOLGA6BA6NDN3 693 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 RRP8O43159 456 aaKnown RBP9.04□□□□□ -0.96
LMO3-222ENST00000540445 SOCS5O75159 536 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 USP12O75317 370 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 CSO75390 466 aaKnown RBP9.04□□□□□ -0.96
LMO3-222ENST00000540445 PROSCO94903 275 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 MAP3K6O95382 1288 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 CPP00450 1065 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 KRT7P08729 469 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 GOLGA6DP0CG33 693 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 CYP2A6P11509 494 aaPredicted RBP9.04□□□□□ -0.96
LMO3-222ENST00000540445 KRT10P13645 584 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 TGM2P21980 687 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 IL4RP24394 825 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 HNRNPH3P31942 346 aaKnown RBP9.04□□□□□ -0.96
LMO3-222ENST00000540445 ACTN2P35609 894 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 RALGDSQ12967 914 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 MTM1Q13496 603 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 TRIM14Q14142 442 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 ARHGEF7Q14155 803 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 DPYSL3Q14195 570 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 AGERQ15109 404 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 ALG11Q2TAA5 492 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 ODF2Q5BJF6 829 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 C6orf132Q5T0Z8 1188 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 ARMC12Q5T9G4 340 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 CDCP2Q5VXM1 449 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 TIGD7Q6NT04 549 aaPredicted RBP9.04□□□□□ -0.96
LMO3-222ENST00000540445 PNCKQ6P2M8 343 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 GUSBP11Q6P575 273 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 CRTC1Q6UUV9 634 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 DPPA4Q7L190 304 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 TAF8Q7Z7C8 310 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 LRRC49Q8IUZ0 686 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 FSTL5Q8N475 847 aaPredicted RBP9.04□□□□□ -0.96
LMO3-222ENST00000540445 CCNYQ8ND76 341 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 TPCN2Q8NHX9 752 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 SLC35G2Q8TBE7 412 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 TBATAQ96M53 351 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 CCDC42Q96M95 316 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 NSMCE3Q96MG7 304 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 CHP1Q99653 195 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 SEMA3CQ99985 751 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 BOCQ9BWV1 1114 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 MAK16Q9BXY0 300 aaKnown RBP9.04□□□□□ -0.96
LMO3-222ENST00000540445 PACSIN1Q9BY11 444 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 CLPBQ9H078 707 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 SYNDIG1Q9H7V2 258 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 HAUS2Q9NVX0 235 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 GOLGA6AQ9NYA3 693 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 B4GALT6Q9UBX8 382 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 LCMT1Q9UIC8 334 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 PADI4Q9UM07 663 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 TTLL3Q9Y4R7 772 aa9.04□□□□□ -0.96
LMO3-222ENST00000540445 ATMQ13315 3056 aa9.03□□□□□ -0.96
LMO3-222ENST00000540445 SSU72P8A0A1W2PR75 194 aa9.03□□□□□ -0.96
LMO3-222ENST00000540445 TMEM202A6NGA9 273 aa9.03□□□□□ -0.96
LMO3-222ENST00000540445 PDE2AO00408 941 aaPredicted RBP9.03□□□□□ -0.96
LMO3-222ENST00000540445 HTRA2O43464 458 aaPredicted RBP9.03□□□□□ -0.96
LMO3-222ENST00000540445 BRINP1O60477 761 aa9.03□□□□□ -0.96
LMO3-222ENST00000540445 PEX11BO96011 259 aa9.03□□□□□ -0.96
LMO3-222ENST00000540445 MPOP05164 745 aa9.03□□□□□ -0.96
LMO3-222ENST00000540445 CELA2BP08218 269 aaPredicted RBP9.03□□□□□ -0.96
LMO3-222ENST00000540445 TNNT1P13805 278 aa9.03□□□□□ -0.96
LMO3-222ENST00000540445 CTPS1P17812 591 aa9.03□□□□□ -0.96
LMO3-222ENST00000540445 CR2P20023 1033 aa9.03□□□□□ -0.96
LMO3-222ENST00000540445 KELP23276 732 aa9.03□□□□□ -0.96
LMO3-222ENST00000540445 CCNCP24863 283 aa9.03□□□□□ -0.96
LMO3-222ENST00000540445 VIPR1P32241 457 aa9.03□□□□□ -0.96
LMO3-222ENST00000540445 EIF2S3P41091 472 aaKnown RBP9.03□□□□□ -0.96
LMO3-222ENST00000540445 GARSP41250 739 aaKnown RBP9.03□□□□□ -0.96
LMO3-222ENST00000540445 EPHB1P54762 984 aa9.03□□□□□ -0.96
LMO3-222ENST00000540445 TAS2R40P59535 323 aa9.03□□□□□ -0.96
LMO3-222ENST00000540445 IFI16Q16666 785 aaKnown RBP9.03□□□□□ -0.96
LMO3-222ENST00000540445 SOWAHCQ53LP3 525 aaPredicted RBP9.03□□□□□ -0.96
LMO3-222ENST00000540445 RALGPS1Q5JS13 557 aa9.03□□□□□ -0.96
LMO3-222ENST00000540445 LVRNQ6Q4G3 990 aa9.03□□□□□ -0.96
LMO3-222ENST00000540445 CPNE8Q86YQ8 564 aa9.03□□□□□ -0.96
LMO3-222ENST00000540445 SDR16C5Q8N3Y7 309 aa9.03□□□□□ -0.96
LMO3-222ENST00000540445 OR56A4Q8NGH8 313 aa9.03□□□□□ -0.96
LMO3-222ENST00000540445 PCDH19Q8TAB3 1148 aa9.03□□□□□ -0.96
LMO3-222ENST00000540445 SNIP1Q8TAD8 396 aaKnown RBP9.03□□□□□ -0.96
LMO3-222ENST00000540445 FAM71BQ8TC56 605 aa9.03□□□□□ -0.96
LMO3-222ENST00000540445 LRRN4Q8WUT4 740 aa9.03□□□□□ -0.96
LMO3-222ENST00000540445 FGF11Q92914 225 aa9.03□□□□□ -0.96
LMO3-222ENST00000540445 NAT6Q93015 286 aa9.03□□□□□ -0.96
LMO3-222ENST00000540445 FUBP1Q96AE4 644 aaKnown RBP9.03□□□□□ -0.96
LMO3-222ENST00000540445 NUS1Q96E22 293 aa9.03□□□□□ -0.96
LMO3-222ENST00000540445 CRELD1Q96HD1 420 aa9.03□□□□□ -0.96
LMO3-222ENST00000540445 DNAJC7Q99615 494 aa9.03□□□□□ -0.96
LMO3-222ENST00000540445 MGME1Q9BQP7 344 aa9.03□□□□□ -0.96
LMO3-222ENST00000540445 ANP32EQ9BTT0 268 aa9.03□□□□□ -0.96
LMO3-222ENST00000540445 SUDS3Q9H7L9 328 aaPredicted RBP9.03□□□□□ -0.96
LMO3-222ENST00000540445 NHEJ1Q9H9Q4 299 aaPredicted RBP9.03□□□□□ -0.96
LMO3-222ENST00000540445 CYP4F12Q9HCS2 524 aa9.03□□□□□ -0.96
LMO3-222ENST00000540445 MRPL40Q9NQ50 206 aaKnown RBP9.03□□□□□ -0.96
LMO3-222ENST00000540445 ABHD10Q9NUJ1 306 aa9.03□□□□□ -0.96
LMO3-222ENST00000540445 RBM22Q9NW64 420 aaKnown RBP eCLIP9.03□□□□□ -0.96
LMO3-222ENST00000540445 KCTD5Q9NXV2 234 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms