RNA–Protein interactions for RNA: ENST00000540326.5

NEK6-213, Transcript of NIMA related kinase 6, humanhuman

TSL 1 (best) BASIC

Gene NEK6, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-213ENST00000540326 TRPV2Q9Y5S1 764 aa12.47□□□□□ -0.41
NEK6-213ENST00000540326 ZNF839A8K0R7 811 aa12.47□□□□□ -0.41
NEK6-213ENST00000540326 H3BSA7 217 aa12.47□□□□□ -0.41
NEK6-213ENST00000540326 TIPRLO75663 272 aa12.47□□□□□ -0.41
NEK6-213ENST00000540326 CNTN5O94779 1100 aa12.47□□□□□ -0.41
NEK6-213ENST00000540326 SIX3O95343 332 aaPredicted RBP12.47□□□□□ -0.41
NEK6-213ENST00000540326 CKMT2P17540 419 aa12.47□□□□□ -0.41
NEK6-213ENST00000540326 HOXC8P31273 242 aa12.47□□□□□ -0.41
NEK6-213ENST00000540326 APOFQ13790 326 aa12.47□□□□□ -0.41
NEK6-213ENST00000540326 PTPRCAPQ14761 206 aa12.47□□□□□ -0.41
NEK6-213ENST00000540326 GEN1Q17RS7 908 aa12.47□□□□□ -0.41
NEK6-213ENST00000540326 ZNF678Q5SXM1 525 aa12.47□□□□□ -0.41
NEK6-213ENST00000540326 MORN1Q5T089 497 aa12.47□□□□□ -0.41
NEK6-213ENST00000540326 AFMIDQ63HM1 303 aa12.47□□□□□ -0.41
NEK6-213ENST00000540326 HMBOX1Q6NT76 420 aa12.47□□□□□ -0.41
NEK6-213ENST00000540326 CD300LGQ6UXG3 332 aa12.47□□□□□ -0.41
NEK6-213ENST00000540326 FUNDC1Q8IVP5 155 aa12.47□□□□□ -0.41
NEK6-213ENST00000540326 PTERQ96BW5 349 aa12.47□□□□□ -0.41
NEK6-213ENST00000540326 C19orf60Q96EN9 201 aa12.47□□□□□ -0.41
NEK6-213ENST00000540326 TSPAN17Q96FV3 270 aa12.47□□□□□ -0.41
NEK6-213ENST00000540326 IMP4Q96G21 291 aaKnown RBP12.47□□□□□ -0.41
NEK6-213ENST00000540326 TRIM62Q9BVG3 475 aa12.47□□□□□ -0.41
NEK6-213ENST00000540326 CNOT11Q9UKZ1 510 aaKnown RBP12.47□□□□□ -0.41
NEK6-213ENST00000540326 SARDHQ9UL12 918 aa12.47□□□□□ -0.41
NEK6-213ENST00000540326 LRRC14BA6NHZ5 514 aa12.46□□□□□ -0.41
NEK6-213ENST00000540326 TNFRSF10BO14763 440 aa12.46□□□□□ -0.41
NEK6-213ENST00000540326 MGEA5O60502 916 aa12.46□□□□□ -0.41
NEK6-213ENST00000540326 SRP72O76094 671 aaKnown RBP12.46□□□□□ -0.41
NEK6-213ENST00000540326 S1PR4O95977 384 aa12.46□□□□□ -0.41
NEK6-213ENST00000540326 PCSK6P29122 969 aa12.46□□□□□ -0.41
NEK6-213ENST00000540326 ETFBP38117 255 aa12.46□□□□□ -0.41
NEK6-213ENST00000540326 GRIA3P42263 894 aa12.46□□□□□ -0.41
NEK6-213ENST00000540326 RENBPP51606 427 aa12.46□□□□□ -0.41
NEK6-213ENST00000540326 INHBCP55103 352 aa12.46□□□□□ -0.41
NEK6-213ENST00000540326 MLLT6P55198 1093 aaPredicted RBP12.46□□□□□ -0.41
NEK6-213ENST00000540326 SH3BP2P78314 561 aa12.46□□□□□ -0.41
NEK6-213ENST00000540326 KIF19Q2TAC6 998 aa12.46□□□□□ -0.41
NEK6-213ENST00000540326 MARC1Q5VT66 337 aa12.46□□□□□ -0.41
NEK6-213ENST00000540326 ARHGAP22Q7Z5H3 698 aa12.46□□□□□ -0.41
NEK6-213ENST00000540326 RETREG3Q86VR2 466 aa12.46□□□□□ -0.41
NEK6-213ENST00000540326 SPATA2LQ8IUW3 424 aaPredicted RBP12.46□□□□□ -0.41
NEK6-213ENST00000540326 SLC22A9Q8IVM8 553 aa12.46□□□□□ -0.41
NEK6-213ENST00000540326 SCML4Q8N228 414 aa12.46□□□□□ -0.41
NEK6-213ENST00000540326 PSMG2Q969U7 264 aa12.46□□□□□ -0.41
NEK6-213ENST00000540326 ZNF597Q96LX8 424 aa12.46□□□□□ -0.41
NEK6-213ENST00000540326 ZNF512Q96ME7 567 aaPredicted RBP12.46□□□□□ -0.41
NEK6-213ENST00000540326 PPP1R2P1Q96PQ5 205 aa12.46□□□□□ -0.41
NEK6-213ENST00000540326 TMEM79Q9BSE2 394 aa12.46□□□□□ -0.41
NEK6-213ENST00000540326 ARNT2Q9HBZ2 717 aa12.46□□□□□ -0.41
NEK6-213ENST00000540326 MRPL40Q9NQ50 206 aaKnown RBP12.46□□□□□ -0.41
NEK6-213ENST00000540326 RGS18Q9NS28 235 aa12.46□□□□□ -0.41
NEK6-213ENST00000540326 PLK2Q9NYY3 685 aa12.46□□□□□ -0.41
NEK6-213ENST00000540326 TMEM181Q9P2C4 612 aa12.46□□□□□ -0.41
NEK6-213ENST00000540326 DSEQ9UL01 958 aa12.46□□□□□ -0.41
NEK6-213ENST00000540326 TCRBV3S1A0A5B6 114 aa12.46□□□□□ -0.42
NEK6-213ENST00000540326 ASLP04424 464 aa12.46□□□□□ -0.42
NEK6-213ENST00000540326 MMP2P08253 660 aa12.46□□□□□ -0.42
NEK6-213ENST00000540326 TSPY1Q01534 308 aa12.46□□□□□ -0.42
NEK6-213ENST00000540326 SLC14A2Q15849 920 aa12.46□□□□□ -0.42
NEK6-213ENST00000540326 ALFQ53S48 1182 aa12.46□□□□□ -0.42
NEK6-213ENST00000540326 GDF6Q6KF10 455 aaPredicted RBP12.46□□□□□ -0.42
NEK6-213ENST00000540326 CXCL17Q6UXB2 119 aa12.46□□□□□ -0.42
NEK6-213ENST00000540326 DHFR2Q86XF0 187 aa12.46□□□□□ -0.42
NEK6-213ENST00000540326 CANT1Q8WVQ1 401 aa12.46□□□□□ -0.42
NEK6-213ENST00000540326 RSPH1Q8WYR4 309 aa12.46□□□□□ -0.42
NEK6-213ENST00000540326 RANBP9Q96S59 729 aa12.46□□□□□ -0.42
NEK6-213ENST00000540326 CAAP1Q9H8G2 361 aa12.46□□□□□ -0.42
NEK6-213ENST00000540326 AKTIPQ9H8T0 292 aa12.46□□□□□ -0.42
NEK6-213ENST00000540326 UXTQ9UBK9 157 aaPredicted RBP12.46□□□□□ -0.42
NEK6-213ENST00000540326 CNOT6Q9ULM6 557 aaKnown RBP12.46□□□□□ -0.42
NEK6-213ENST00000540326 DMTF1Q9Y222 760 aa12.46□□□□□ -0.42
NEK6-213ENST00000540326 DNAJC15Q9Y5T4 150 aa12.46□□□□□ -0.42
NEK6-213ENST00000540326 NR5A2O00482 541 aa12.45□□□□□ -0.42
NEK6-213ENST00000540326 AKAP10O43572 662 aa12.45□□□□□ -0.42
NEK6-213ENST00000540326 SLC7A1P30825 629 aa12.45□□□□□ -0.42
NEK6-213ENST00000540326 CD52P31358 61 aa12.45□□□□□ -0.42
NEK6-213ENST00000540326 NR1H2P55055 460 aa12.45□□□□□ -0.42
NEK6-213ENST00000540326 FOXA1P55317 472 aa12.45□□□□□ -0.42
NEK6-213ENST00000540326 STX1BP61266 288 aa12.45□□□□□ -0.42
NEK6-213ENST00000540326 YBX1P67809 324 aaKnown RBP12.45□□□□□ -0.42
NEK6-213ENST00000540326 USP41Q3LFD5 358 aa12.45□□□□□ -0.42
NEK6-213ENST00000540326 UNC50Q53HI1 259 aa12.45□□□□□ -0.42
NEK6-213ENST00000540326 SIRPB2Q5JXA9 342 aa12.45□□□□□ -0.42
NEK6-213ENST00000540326 SAMD4BQ5PRF9 694 aaKnown RBP12.45□□□□□ -0.42
NEK6-213ENST00000540326 TSPAN14Q8NG11 270 aa12.45□□□□□ -0.42
NEK6-213ENST00000540326 TOP1MTQ969P6 601 aa12.45□□□□□ -0.42
NEK6-213ENST00000540326 SLC45A3Q96JT2 553 aa12.45□□□□□ -0.42
NEK6-213ENST00000540326 TBATAQ96M53 351 aa12.45□□□□□ -0.42
NEK6-213ENST00000540326 KCNA7Q96RP8 456 aa12.45□□□□□ -0.42
NEK6-213ENST00000540326 TRIM8Q9BZR9 551 aa12.45□□□□□ -0.42
NEK6-213ENST00000540326 ATP13A1Q9HD20 1204 aa12.45□□□□□ -0.42
NEK6-213ENST00000540326 ABI2Q9NYB9 513 aaPredicted RBP12.45□□□□□ -0.42
NEK6-213ENST00000540326 COL4A4P53420 1690 aaPredicted RBP12.45□□□□□ -0.42
NEK6-213ENST00000540326 A0A0J9YYE9 177 aa12.45□□□□□ -0.42
NEK6-213ENST00000540326 PLOD2O00469 737 aa12.45□□□□□ -0.42
NEK6-213ENST00000540326 CYP11A1P05108 521 aa12.45□□□□□ -0.42
NEK6-213ENST00000540326 PIRTP0C851 137 aa12.45□□□□□ -0.42
NEK6-213ENST00000540326 ATP6V1B2P21281 511 aa12.45□□□□□ -0.42
NEK6-213ENST00000540326 RPL10P27635 214 aaKnown RBP12.45□□□□□ -0.42
NEK6-213ENST00000540326 HTR7P34969 479 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms