RNA–Protein interactions for RNA: ENST00000540317.5

CYB561A3-215, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-215ENST00000540317 MAGEA12P43365 314 aa12.02□□□□□ -0.49
CYB561A3-215ENST00000540317 SERPINH1P50454 418 aaKnown RBP12.02□□□□□ -0.49
CYB561A3-215ENST00000540317 ITKQ08881 620 aa12.02□□□□□ -0.49
CYB561A3-215ENST00000540317 CCDC153Q494R4 210 aa12.02□□□□□ -0.49
CYB561A3-215ENST00000540317 SPDYAQ5MJ70 313 aa12.02□□□□□ -0.49
CYB561A3-215ENST00000540317 ADGRF1Q5T601 910 aa12.02□□□□□ -0.49
CYB561A3-215ENST00000540317 NAIF1Q69YI7 327 aaPredicted RBP12.02□□□□□ -0.49
CYB561A3-215ENST00000540317 CGB2Q6NT52 195 aa12.02□□□□□ -0.49
CYB561A3-215ENST00000540317 CES3Q6UWW8 571 aa12.02□□□□□ -0.49
CYB561A3-215ENST00000540317 ZNF783Q6ZMS7 281 aa12.02□□□□□ -0.49
CYB561A3-215ENST00000540317 OTOAQ7RTW8 1153 aa12.02□□□□□ -0.49
CYB561A3-215ENST00000540317 CCDC91Q7Z6B0 441 aa12.02□□□□□ -0.49
CYB561A3-215ENST00000540317 NUDCD3Q8IVD9 361 aa12.02□□□□□ -0.49
CYB561A3-215ENST00000540317 CNTN4Q8IWV2 1026 aa12.02□□□□□ -0.49
CYB561A3-215ENST00000540317 CALML6Q8TD86 181 aa12.02□□□□□ -0.49
CYB561A3-215ENST00000540317 NELL1Q92832 810 aa12.02□□□□□ -0.49
CYB561A3-215ENST00000540317 FAM167BQ9BTA0 163 aa12.02□□□□□ -0.49
CYB561A3-215ENST00000540317 KLF16Q9BXK1 252 aaPredicted RBP12.02□□□□□ -0.49
CYB561A3-215ENST00000540317 TRIM55Q9BYV6 548 aa12.02□□□□□ -0.49
CYB561A3-215ENST00000540317 POLR1EQ9GZS1 481 aaKnown RBP12.02□□□□□ -0.49
CYB561A3-215ENST00000540317 SIRPGQ9P1W8 387 aa12.02□□□□□ -0.49
CYB561A3-215ENST00000540317 PSAT1Q9Y617 370 aa12.02□□□□□ -0.49
CYB561A3-215ENST00000540317 DENND4CQ5VZ89 1909 aa12.02□□□□□ -0.49
CYB561A3-215ENST00000540317 COL4A2P08572 1712 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 ILVBLA1L0T0 632 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 ATG13O75143 517 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 STC2O76061 302 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 BPGMP07738 259 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 NMBRP28336 390 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 GNA12Q03113 381 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 CDK18Q07002 472 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 SLC10A7Q0GE19 358 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 ZNF177Q13360 481 aaPredicted RBP12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 PDE1CQ14123 709 aaPredicted RBP12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 ZNF235Q14590 738 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 HSP90AA5PQ58FG0 334 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 FAM133BQ5BKY9 247 aaKnown RBP12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 KIAA0930Q6ICG6 404 aaPredicted RBP12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 CDHR3Q6ZTQ4 885 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 DCLK2Q8N568 766 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 SUMF1Q8NBK3 374 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 ARMC2Q8NEN0 867 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 SPOCK2Q92563 424 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 ZNF419Q96HQ0 510 aaPredicted RBP12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 RHOJQ9H4E5 214 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 SLCO1B3Q9NPD5 702 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 IARS2Q9NSE4 1012 aaKnown RBP12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 C2orf42Q9NWW7 574 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 TBC1D14Q9P2M4 693 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 MID2Q9UJV3 735 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 STOML2Q9UJZ1 356 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 ANKRD6Q9Y2G4 727 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 SH3BP1Q9Y3L3 701 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 NYNRINQ9P2P1 1898 aaKnown RBP12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 OBSL1O75147 1896 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 A0A1B0GVM2 712 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 TCAF2A6NFQ2 919 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 CHURC1-FNTBB4DL54 471 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 KDELR3O43731 214 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 ATP5HO75947 161 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 APOA4P06727 396 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 IRF1P10914 325 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 BGNP21810 368 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 CORO1AP31146 461 aaKnown RBP12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 SLC6A4P31645 630 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 CD86P42081 329 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 SCTRP47872 440 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 FNTBP49356 437 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 THOC5Q13769 683 aaKnown RBP12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 POU6F1Q14863 301 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 FBXO43Q4G163 708 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 ALG1LQ6GMV1 187 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 KIAA0408Q6ZU52 694 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 DENND1CQ8IV53 801 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 LMNTD2Q8IXW0 634 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 SREK1Q8WXA9 508 aaKnown RBP12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 PEX13Q92968 403 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 FEM1CQ96JP0 617 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 C7orf26Q96N11 449 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 GPR22Q99680 433 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 MCMBPQ9BTE3 642 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 PDFQ9HBH1 243 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 SNX15Q9NRS6 342 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 TREX1Q9NSU2 369 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 NCDNQ9UBB6 729 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 SEPT3Q9UH03 358 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 RAB23Q9ULC3 237 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 SLC12A4Q9UP95 1085 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 SLC8A2Q9UPR5 921 aa12.01□□□□□ -0.49
CYB561A3-215ENST00000540317 CFAP54Q96N23 3096 aa12□□□□□ -0.49
CYB561A3-215ENST00000540317 GVINP1Q7Z2Y8 2422 aa12□□□□□ -0.49
CYB561A3-215ENST00000540317 LOC285095A0A1B0GVY8 99 aa12□□□□□ -0.49
CYB561A3-215ENST00000540317 E2F8A0AVK6 867 aa12□□□□□ -0.49
CYB561A3-215ENST00000540317 TYW5A2RUC4 315 aaKnown RBP12□□□□□ -0.49
CYB561A3-215ENST00000540317 ANKRD65E5RJM6 399 aa12□□□□□ -0.49
CYB561A3-215ENST00000540317 H0YHG0 523 aa12□□□□□ -0.49
CYB561A3-215ENST00000540317 PLIN3O60664 434 aa12□□□□□ -0.49
CYB561A3-215ENST00000540317 LILRB5O75023 590 aa12□□□□□ -0.49
CYB561A3-215ENST00000540317 DNAJC8O75937 253 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms