RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 GOT2P00505 430 aaKnown RBP13.69□□□□□ -0.22
BNIP3-202ENST00000540159 SMIM18P0DKX4 95 aa13.69□□□□□ -0.22
BNIP3-202ENST00000540159 MLLT6P55198 1093 aaPredicted RBP13.69□□□□□ -0.22
BNIP3-202ENST00000540159 POU4F1Q01851 419 aa13.69□□□□□ -0.22
BNIP3-202ENST00000540159 MAP7D1Q3KQU3 841 aa13.69□□□□□ -0.22
BNIP3-202ENST00000540159 KDELC1Q6UW63 502 aa13.69□□□□□ -0.22
BNIP3-202ENST00000540159 CYHR1Q6ZMK1 362 aa13.69□□□□□ -0.22
BNIP3-202ENST00000540159 HERC6Q8IVU3 1022 aa13.69□□□□□ -0.22
BNIP3-202ENST00000540159 SMOC2Q9H3U7 446 aa13.69□□□□□ -0.22
BNIP3-202ENST00000540159 ZNF385DQ9H6B1 395 aa13.69□□□□□ -0.22
BNIP3-202ENST00000540159 RRN3Q9NYV6 651 aa13.69□□□□□ -0.22
BNIP3-202ENST00000540159 TRPC5OSA6NMA1 111 aa13.69□□□□□ -0.22
BNIP3-202ENST00000540159 PLOD2O00469 737 aa13.69□□□□□ -0.22
BNIP3-202ENST00000540159 ACOT8O14734 319 aa13.69□□□□□ -0.22
BNIP3-202ENST00000540159 SNUPNO95149 360 aaKnown RBP13.69□□□□□ -0.22
BNIP3-202ENST00000540159 FMO4P31512 558 aa13.69□□□□□ -0.22
BNIP3-202ENST00000540159 GATMP50440 423 aa13.69□□□□□ -0.22
BNIP3-202ENST00000540159 RAB27AP51159 221 aa13.69□□□□□ -0.22
BNIP3-202ENST00000540159 KCNQ1P51787 676 aa13.69□□□□□ -0.22
BNIP3-202ENST00000540159 TUSC3Q13454 348 aa13.69□□□□□ -0.22
BNIP3-202ENST00000540159 LPIN1Q14693 890 aa13.69□□□□□ -0.22
BNIP3-202ENST00000540159 MGAT5BQ3V5L5 792 aa13.69□□□□□ -0.22
BNIP3-202ENST00000540159 KIAA0930Q6ICG6 404 aaPredicted RBP13.69□□□□□ -0.22
BNIP3-202ENST00000540159 ZBTB46Q86UZ6 589 aa13.69□□□□□ -0.22
BNIP3-202ENST00000540159 VPS33AQ96AX1 596 aa13.69□□□□□ -0.22
BNIP3-202ENST00000540159 TUBGCP3Q96CW5 907 aa13.69□□□□□ -0.22
BNIP3-202ENST00000540159 TSGA13Q96PP4 275 aa13.69□□□□□ -0.22
BNIP3-202ENST00000540159 CCSER2Q9H7U1 834 aa13.69□□□□□ -0.22
BNIP3-202ENST00000540159 PRDM16Q9HAZ2 1276 aa13.69□□□□□ -0.22
BNIP3-202ENST00000540159 AP4S1Q9Y587 144 aa13.69□□□□□ -0.22
BNIP3-202ENST00000540159 IQCA1LA6NCM1 817 aa13.68□□□□□ -0.22
BNIP3-202ENST00000540159 ENPP3O14638 875 aa13.68□□□□□ -0.22
BNIP3-202ENST00000540159 TNFRSF10BO14763 440 aa13.68□□□□□ -0.22
BNIP3-202ENST00000540159 KIF3CO14782 793 aa13.68□□□□□ -0.22
BNIP3-202ENST00000540159 PIP5K1BO14986 540 aa13.68□□□□□ -0.22
BNIP3-202ENST00000540159 IGLV3-25P01717 112 aa13.68□□□□□ -0.22
BNIP3-202ENST00000540159 TFAP2AP05549 437 aa13.68□□□□□ -0.22
BNIP3-202ENST00000540159 BMP1P13497 986 aa13.68□□□□□ -0.22
BNIP3-202ENST00000540159 ELNP15502 786 aa13.68□□□□□ -0.22
BNIP3-202ENST00000540159 PRDX3P30048 256 aaKnown RBP13.68□□□□□ -0.22
BNIP3-202ENST00000540159 CSRP3P50461 194 aa13.68□□□□□ -0.22
BNIP3-202ENST00000540159 RBBP5Q15291 538 aaKnown RBP13.68□□□□□ -0.22
BNIP3-202ENST00000540159 OR4D1Q15615 310 aa13.68□□□□□ -0.22
BNIP3-202ENST00000540159 MAP3K21Q5TCX8 1036 aa13.68□□□□□ -0.22
BNIP3-202ENST00000540159 CST9Q5W186 159 aa13.68□□□□□ -0.22
BNIP3-202ENST00000540159 ISCA2Q86U28 154 aa13.68□□□□□ -0.22
BNIP3-202ENST00000540159 RETREG3Q86VR2 466 aa13.68□□□□□ -0.22
BNIP3-202ENST00000540159 CNTN4Q8IWV2 1026 aa13.68□□□□□ -0.22
BNIP3-202ENST00000540159 CANT1Q8WVQ1 401 aa13.68□□□□□ -0.22
BNIP3-202ENST00000540159 HAPLN3Q96S86 360 aa13.68□□□□□ -0.22
BNIP3-202ENST00000540159 ZIC5Q96T25 663 aa13.68□□□□□ -0.22
BNIP3-202ENST00000540159 MTG1Q9BT17 334 aaPredicted RBP13.68□□□□□ -0.22
BNIP3-202ENST00000540159 C1orf50Q9BV19 199 aa13.68□□□□□ -0.22
BNIP3-202ENST00000540159 GSTO2Q9H4Y5 243 aa13.68□□□□□ -0.22
BNIP3-202ENST00000540159 AKTIPQ9H8T0 292 aa13.68□□□□□ -0.22
BNIP3-202ENST00000540159 ZDHHC7Q9NXF8 308 aa13.68□□□□□ -0.22
BNIP3-202ENST00000540159 C6orf203Q9P0P8 240 aaPredicted RBP13.68□□□□□ -0.22
BNIP3-202ENST00000540159 CCDC162PA2VCL2 907 aa13.68□□□□□ -0.22
BNIP3-202ENST00000540159 BCAS2O75934 225 aaPredicted RBP13.68□□□□□ -0.22
BNIP3-202ENST00000540159 PEX11BO96011 259 aa13.68□□□□□ -0.22
BNIP3-202ENST00000540159 MMP2P08253 660 aa13.68□□□□□ -0.22
BNIP3-202ENST00000540159 HADHAP40939 763 aa13.68□□□□□ -0.22
BNIP3-202ENST00000540159 RGS2P41220 211 aa13.68□□□□□ -0.22
BNIP3-202ENST00000540159 PRKAA2P54646 552 aa13.68□□□□□ -0.22
BNIP3-202ENST00000540159 POLD3Q15054 466 aaPredicted RBP13.68□□□□□ -0.22
BNIP3-202ENST00000540159 ZNF549Q6P9A3 640 aa13.68□□□□□ -0.22
BNIP3-202ENST00000540159 SPPL2CQ8IUH8 684 aa13.68□□□□□ -0.22
BNIP3-202ENST00000540159 OR7D4Q8NG98 312 aa13.68□□□□□ -0.22
BNIP3-202ENST00000540159 DNAJB14Q8TBM8 379 aa13.68□□□□□ -0.22
BNIP3-202ENST00000540159 TRIB2Q92519 343 aa13.68□□□□□ -0.22
BNIP3-202ENST00000540159 TMIGD2Q96BF3 282 aa13.68□□□□□ -0.22
BNIP3-202ENST00000540159 RMDN1Q96DB5 314 aa13.68□□□□□ -0.22
BNIP3-202ENST00000540159 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.68□□□□□ -0.22
BNIP3-202ENST00000540159 EPS15L1Q9UBC2 864 aa13.68□□□□□ -0.22
BNIP3-202ENST00000540159 GALPQ9UBC7 116 aa13.68□□□□□ -0.22
BNIP3-202ENST00000540159 USP22Q9UPT9 525 aa13.68□□□□□ -0.22
BNIP3-202ENST00000540159 SUPT3HB4E1H0 165 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 TRIM38O00635 465 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 CASQ2O14958 399 aaPredicted RBP13.67□□□□□ -0.22
BNIP3-202ENST00000540159 FGF10O15520 208 aaPredicted RBP13.67□□□□□ -0.22
BNIP3-202ENST00000540159 SUPT3HO75486 399 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 BAIAP3O94812 1187 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 NCK1P16333 377 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 AGTR2P50052 363 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 SCNN1BP51168 640 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 RENBPP51606 427 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 DIO3P55073 304 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 INHBEP58166 350 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 KCNA10Q16322 511 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 MANEALQ5VSG8 457 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 EFHBQ8N7U6 833 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 FBXO32Q969P5 355 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 CDK15Q96Q40 435 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 SLC25A51Q9H1U9 297 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 SOX17Q9H6I2 414 aaPredicted RBP13.67□□□□□ -0.22
BNIP3-202ENST00000540159 DNAJC15Q9Y5T4 150 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 A0A087X1B8 175 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 S1PR4O95977 384 aa13.67□□□□□ -0.22
BNIP3-202ENST00000540159 SNRPB2P08579 225 aaKnown RBP13.67□□□□□ -0.22
BNIP3-202ENST00000540159 MTHFD1P11586 935 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms