RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 ADRB3P13945 408 aa18.97■□□□□ 0.63
TNFRSF1A-213ENST00000540022 XPAP23025 273 aaPredicted RBP18.97■□□□□ 0.63
TNFRSF1A-213ENST00000540022 P2RY2P41231 377 aa18.97■□□□□ 0.63
TNFRSF1A-213ENST00000540022 NBL1P41271 181 aa18.97■□□□□ 0.63
TNFRSF1A-213ENST00000540022 MAGEA4P43358 317 aa18.97■□□□□ 0.63
TNFRSF1A-213ENST00000540022 SEPT6Q14141 434 aa18.97■□□□□ 0.63
TNFRSF1A-213ENST00000540022 BRD3Q15059 726 aa18.97■□□□□ 0.63
TNFRSF1A-213ENST00000540022 CDKN3Q16667 212 aa18.97■□□□□ 0.63
TNFRSF1A-213ENST00000540022 PCID2Q5JVF3 399 aa18.97■□□□□ 0.63
TNFRSF1A-213ENST00000540022 PIP5KL1Q5T9C9 394 aa18.97■□□□□ 0.63
TNFRSF1A-213ENST00000540022 CASC4Q6P4E1 433 aa18.97■□□□□ 0.63
TNFRSF1A-213ENST00000540022 FBXL19Q6PCT2 694 aa18.97■□□□□ 0.63
TNFRSF1A-213ENST00000540022 TMC3Q7Z5M5 1100 aa18.97■□□□□ 0.63
TNFRSF1A-213ENST00000540022 TSPAN33Q86UF1 283 aa18.97■□□□□ 0.63
TNFRSF1A-213ENST00000540022 RELL1Q8IUW5 271 aa18.97■□□□□ 0.63
TNFRSF1A-213ENST00000540022 HDDC3Q8N4P3 179 aa18.97■□□□□ 0.63
TNFRSF1A-213ENST00000540022 BRSK1Q8TDC3 778 aa18.97■□□□□ 0.63
TNFRSF1A-213ENST00000540022 HMGB4Q8WW32 186 aa18.97■□□□□ 0.63
TNFRSF1A-213ENST00000540022 C9orf72Q96LT7 481 aa18.97■□□□□ 0.63
TNFRSF1A-213ENST00000540022 EBNA1BP2Q99848 306 aaKnown RBP18.97■□□□□ 0.63
TNFRSF1A-213ENST00000540022 TXLNGYQ9BZA5 131 aa18.97■□□□□ 0.63
TNFRSF1A-213ENST00000540022 PABPC3Q9H361 631 aaKnown RBP18.97■□□□□ 0.63
TNFRSF1A-213ENST00000540022 CHRAC1Q9NRG0 131 aa18.97■□□□□ 0.63
TNFRSF1A-213ENST00000540022 B4GALT6Q9UBX8 382 aa18.97■□□□□ 0.63
TNFRSF1A-213ENST00000540022 TCAF1Q9Y4C2 921 aa18.97■□□□□ 0.63
TNFRSF1A-213ENST00000540022 A0A1W2PP55 124 aa18.96■□□□□ 0.63
TNFRSF1A-213ENST00000540022 CCDC151A5D8V7 595 aa18.96■□□□□ 0.63
TNFRSF1A-213ENST00000540022 LDB2O43679 373 aa18.96■□□□□ 0.63
TNFRSF1A-213ENST00000540022 LHCGRP22888 699 aa18.96■□□□□ 0.63
TNFRSF1A-213ENST00000540022 ADRA1DP25100 572 aa18.96■□□□□ 0.63
TNFRSF1A-213ENST00000540022 MAGEA9P43362 315 aa18.96■□□□□ 0.63
TNFRSF1A-213ENST00000540022 FAM193AP78312 1265 aa18.96■□□□□ 0.63
TNFRSF1A-213ENST00000540022 ZBTB16Q05516 673 aa18.96■□□□□ 0.63
TNFRSF1A-213ENST00000540022 SLMAPQ14BN4 828 aa18.96■□□□□ 0.63
TNFRSF1A-213ENST00000540022 EMBQ6PCB8 327 aa18.96■□□□□ 0.63
TNFRSF1A-213ENST00000540022 CRTC1Q6UUV9 634 aa18.96■□□□□ 0.63
TNFRSF1A-213ENST00000540022 KIAA1324Q6UXG2 1013 aaKnown RBP18.96■□□□□ 0.63
TNFRSF1A-213ENST00000540022 CEP128Q6ZU80 1094 aa18.96■□□□□ 0.63
TNFRSF1A-213ENST00000540022 LYSMD3Q7Z3D4 306 aa18.96■□□□□ 0.63
TNFRSF1A-213ENST00000540022 GLT6D1Q7Z4J2 308 aa18.96■□□□□ 0.63
TNFRSF1A-213ENST00000540022 MAML2Q8IZL2 1156 aaPredicted RBP18.96■□□□□ 0.63
TNFRSF1A-213ENST00000540022 TTC30BQ8N4P2 665 aa18.96■□□□□ 0.63
TNFRSF1A-213ENST00000540022 PYROXD1Q8WU10 500 aa18.96■□□□□ 0.63
TNFRSF1A-213ENST00000540022 STAMBPL1Q96FJ0 436 aa18.96■□□□□ 0.63
TNFRSF1A-213ENST00000540022 ZNF778Q96MU6 729 aa18.96■□□□□ 0.63
TNFRSF1A-213ENST00000540022 HHIPQ96QV1 700 aa18.96■□□□□ 0.63
TNFRSF1A-213ENST00000540022 RANBP9Q96S59 729 aa18.96■□□□□ 0.63
TNFRSF1A-213ENST00000540022 SPATA6Q9NWH7 488 aaPredicted RBP18.96■□□□□ 0.63
TNFRSF1A-213ENST00000540022 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.96■□□□□ 0.63
TNFRSF1A-213ENST00000540022 HACD3Q9P035 362 aa18.96■□□□□ 0.63
TNFRSF1A-213ENST00000540022 SOX13Q9UN79 622 aa18.96■□□□□ 0.63
TNFRSF1A-213ENST00000540022 ITM2BQ9Y287 266 aa18.96■□□□□ 0.63
TNFRSF1A-213ENST00000540022 ZNF711Q9Y462 761 aa18.96■□□□□ 0.63
TNFRSF1A-213ENST00000540022 KCTD3Q9Y597 815 aa18.96■□□□□ 0.63
TNFRSF1A-213ENST00000540022 ARL5AQ9Y689 179 aa18.96■□□□□ 0.63
TNFRSF1A-213ENST00000540022 CCDC78A2IDD5 438 aa18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 HEATR9A2RTY3 570 aa18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 PROB1E7EW31 1015 aa18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 AREL1O15033 823 aa18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 BUD23O43709 281 aaKnown RBP18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 RNASEH2AO75792 299 aaKnown RBP18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 TAF1AQ15573 450 aaPredicted RBP18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 UBAP2Q5T6F2 1119 aaKnown RBP18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 AGBL4Q5VU57 503 aa18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 ANO7Q6IWH7 933 aa18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 CES3Q6UWW8 571 aa18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 PPHLN1Q8NEY8 458 aaKnown RBP18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 TSTD1Q8NFU3 115 aa18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 EID2BQ96D98 161 aa18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 KIFC1Q9BW19 673 aa18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 CDC42EP4Q9H3Q1 356 aaKnown RBP18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 SEMA4AQ9H3S1 761 aa18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 TRABDQ9H4I3 376 aa18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 PLAC1Q9HBJ0 212 aa18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 CD93Q9NPY3 652 aa18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 FBXL12Q9NXK8 326 aa18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 SAMD15Q9P1V8 674 aa18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 GGT7Q9UJ14 662 aa18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 SCML1Q9UN30 329 aa18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 CFAP54Q96N23 3096 aa18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 C1orf232A0A0U1RR37 186 aa18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 MAGEB16A2A368 324 aa18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 MROH6A6NGR9 719 aa18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 CLDN7O95471 211 aa18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 VIPR1P32241 457 aa18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 MMP12P39900 470 aa18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 TAS2R38P59533 333 aa18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 RALGDSQ12967 914 aa18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 PTPRCAPQ14761 206 aa18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 KYNUQ16719 465 aa18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 TTC31Q49AM3 519 aaPredicted RBP18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 MAP9Q49MG5 647 aa18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 LRRC66Q68CR7 880 aa18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 ERAP2Q6P179 960 aa18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 TSSK4Q6SA08 328 aa18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 DPPA4Q7L190 304 aa18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 GANCQ8TET4 914 aa18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 PTCD2Q8WV60 388 aaKnown RBP18.95■□□□□ 0.62
TNFRSF1A-213ENST00000540022 CAVIN3Q969G5 261 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms