RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 TOE1Q96GM8 510 aaKnown RBP6.53□□□□□ -1.36
SNHG1-212ENST00000539975 KLHL32Q96NJ5 620 aa6.53□□□□□ -1.36
SNHG1-212ENST00000539975 OLFM3Q96PB7 478 aa6.53□□□□□ -1.36
SNHG1-212ENST00000539975 SRPK1Q96SB4 655 aaKnown RBP6.53□□□□□ -1.36
SNHG1-212ENST00000539975 OSBPL9Q96SU4 736 aa6.53□□□□□ -1.36
SNHG1-212ENST00000539975 SEMA3CQ99985 751 aa6.53□□□□□ -1.36
SNHG1-212ENST00000539975 MGME1Q9BQP7 344 aa6.53□□□□□ -1.36
SNHG1-212ENST00000539975 GPR174Q9BXC1 333 aa6.53□□□□□ -1.36
SNHG1-212ENST00000539975 C1QTNF7Q9BXJ2 289 aa6.53□□□□□ -1.36
SNHG1-212ENST00000539975 FSD1LQ9BXM9 530 aa6.53□□□□□ -1.36
SNHG1-212ENST00000539975 TLR10Q9BXR5 811 aa6.53□□□□□ -1.36
SNHG1-212ENST00000539975 HDAC8Q9BY41 377 aa6.53□□□□□ -1.36
SNHG1-212ENST00000539975 PCED1AQ9H1Q7 454 aa6.53□□□□□ -1.36
SNHG1-212ENST00000539975 SLC6A17Q9H1V8 727 aa6.53□□□□□ -1.36
SNHG1-212ENST00000539975 SRA1Q9HD15 236 aaKnown RBP6.53□□□□□ -1.36
SNHG1-212ENST00000539975 KCND1Q9NSA2 647 aa6.53□□□□□ -1.36
SNHG1-212ENST00000539975 POLR3BQ9NW08 1133 aaPredicted RBP6.53□□□□□ -1.36
SNHG1-212ENST00000539975 NCDNQ9UBB6 729 aa6.53□□□□□ -1.36
SNHG1-212ENST00000539975 RNF14Q9UBS8 474 aa6.53□□□□□ -1.36
SNHG1-212ENST00000539975 RSPH14Q9UHP6 348 aa6.53□□□□□ -1.36
SNHG1-212ENST00000539975 DNPEPQ9ULA0 475 aa6.53□□□□□ -1.36
SNHG1-212ENST00000539975 SNX12Q9UMY4 172 aa6.53□□□□□ -1.36
SNHG1-212ENST00000539975 INVSQ9Y283 1065 aa6.53□□□□□ -1.36
SNHG1-212ENST00000539975 AAR2Q9Y312 384 aaKnown RBP6.53□□□□□ -1.36
SNHG1-212ENST00000539975 ACTL7AQ9Y615 435 aa6.53□□□□□ -1.36
SNHG1-212ENST00000539975 R4GN57 208 aa6.53□□□□□ -1.36
SNHG1-212ENST00000539975 UNC80Q8N2C7 3258 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 BCLAF3A2AJT9 711 aaKnown RBP6.52□□□□□ -1.37
SNHG1-212ENST00000539975 ANTXRLA6NF34 631 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 USP27XA6NNY8 438 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 PRR5-ARHGAP8B1AHC4 643 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 C1QTNF9BB2RNN3 333 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 C9orf172C9J069 976 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 RNF103O00237 685 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 PSMD3O43242 534 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 TSPAN6O43657 245 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 FOXD2O60548 495 aaPredicted RBP6.52□□□□□ -1.37
SNHG1-212ENST00000539975 OPHN1O60890 802 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 SMNDC1O75940 238 aaKnown RBP eCLIP6.52□□□□□ -1.373e-14■■■■■ 31.4
SNHG1-212ENST00000539975 FSBPO95073 299 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 CD160O95971 181 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 IFNB1P01574 187 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 LMNAP02545 664 aaKnown RBP6.52□□□□□ -1.37
SNHG1-212ENST00000539975 ITGB2P05107 769 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 CYP2A6P11509 494 aaPredicted RBP6.52□□□□□ -1.37
SNHG1-212ENST00000539975 ADRB3P13945 408 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 PECAM1P16284 738 aaPredicted RBP6.52□□□□□ -1.37
SNHG1-212ENST00000539975 RBL1P28749 1068 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 MAXP61244 160 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 ETF1P62495 437 aaKnown RBP6.52□□□□□ -1.37
SNHG1-212ENST00000539975 RPS21P63220 83 aaKnown RBP6.52□□□□□ -1.37
SNHG1-212ENST00000539975 FAM193AP78312 1265 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 CNTN1Q12860 1018 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 SNX1Q13596 522 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 ARHGEF7Q14155 803 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 PRKD1Q15139 912 aaPredicted RBP6.52□□□□□ -1.37
SNHG1-212ENST00000539975 P3H1Q32P28 736 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 ARTNQ5T4W7 220 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 LYSMD4Q5XG99 296 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 LAIR1Q6GTX8 287 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 USP45Q70EL2 814 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 CD163Q86VB7 1156 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 CAMK1DQ8IU85 385 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 TP53INP2Q8IXH6 220 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 TMEFF1Q8IYR6 380 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 MAML2Q8IZL2 1156 aaPredicted RBP6.52□□□□□ -1.37
SNHG1-212ENST00000539975 TEX26Q8N6G2 289 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 PRSS33Q8NF86 280 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 CXorf40AQ8TE69 158 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 MAML1Q92585 1016 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 RMDN1Q96DB5 314 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 LOXL4Q96JB6 756 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 TEKT5Q96M29 485 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 QKIQ96PU8 341 aaKnown RBP eCLIP6.52□□□□□ -1.37
SNHG1-212ENST00000539975 IL12RB2Q99665 862 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 SPOCK3Q9BQ16 436 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 MIR1-1HGQ9H1L0 117 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 SLC25A51Q9H1U9 297 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 NEUROG2Q9H2A3 272 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 NOD2Q9HC29 1040 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 PREBQ9HCU5 417 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 C2orf42Q9NWW7 574 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 KCTD5Q9NXV2 234 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 WSB2Q9NYS7 404 aaPredicted RBP6.52□□□□□ -1.37
SNHG1-212ENST00000539975 USP36Q9P275 1121 aaKnown RBP6.52□□□□□ -1.37
SNHG1-212ENST00000539975 DKK3Q9UBP4 350 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 LHX3Q9UBR4 397 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 SUSD2Q9UGT4 822 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 RAI2Q9Y5P3 530 aa6.52□□□□□ -1.37
SNHG1-212ENST00000539975 MYO10Q9HD67 2058 aa6.51□□□□□ -1.37
SNHG1-212ENST00000539975 IGHV1OR15-9A0A0B4J2B8 117 aa6.51□□□□□ -1.37
SNHG1-212ENST00000539975 UPK3BL1B0FP48 263 aa6.51□□□□□ -1.37
SNHG1-212ENST00000539975 UPK3BL2E5RIL1 263 aa6.51□□□□□ -1.37
SNHG1-212ENST00000539975 PLRG1O43660 514 aaKnown RBP6.51□□□□□ -1.37
SNHG1-212ENST00000539975 NDUFB5O43674 189 aa6.51□□□□□ -1.37
SNHG1-212ENST00000539975 AP1G1O43747 822 aa6.51□□□□□ -1.37
SNHG1-212ENST00000539975 LIASO43766 372 aa6.51□□□□□ -1.37
SNHG1-212ENST00000539975 MAGEC1O60732 1142 aa6.51□□□□□ -1.37
SNHG1-212ENST00000539975 TNFRSF21O75509 655 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms