RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 MPP6Q9NZW5 540 aa3.91□□□□□ -1.78
AC055720.1-201ENST00000539552 PTGFRNQ9P2B2 879 aa3.91□□□□□ -1.78
AC055720.1-201ENST00000539552 DKK4Q9UBT3 224 aa3.91□□□□□ -1.78
AC055720.1-201ENST00000539552 CDH22Q9UJ99 828 aa3.91□□□□□ -1.78
AC055720.1-201ENST00000539552 BAG5Q9UL15 447 aa3.91□□□□□ -1.78
AC055720.1-201ENST00000539552 CHKBQ9Y259 395 aa3.91□□□□□ -1.78
AC055720.1-201ENST00000539552 RPH3AQ9Y2J0 694 aaPredicted RBP3.91□□□□□ -1.78
AC055720.1-201ENST00000539552 MRPL11Q9Y3B7 192 aaKnown RBP3.91□□□□□ -1.78
AC055720.1-201ENST00000539552 PCDHGA5Q9Y5G8 931 aa3.91□□□□□ -1.78
AC055720.1-201ENST00000539552 PCDHGA1Q9Y5H4 931 aa3.91□□□□□ -1.78
AC055720.1-201ENST00000539552 NFS1Q9Y697 457 aa3.91□□□□□ -1.78
AC055720.1-201ENST00000539552 SCN4AP35499 1836 aa3.91□□□□□ -1.78
AC055720.1-201ENST00000539552 AKAP11Q9UKA4 1901 aa3.9□□□□□ -1.78
AC055720.1-201ENST00000539552 CCDC187A0A096LP49 1063 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 PNMA6EA0A0J9YXQ4 647 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 FAM237BA0A1B0GVD1 139 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 LINC00854A0A1B0GVQ3 168 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 A0A1W2PQM1 296 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 ZSCAN5CA6NGD5 496 aaPredicted RBP3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 SH2D7A6NKC9 451 aaPredicted RBP3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 C16orf96A6NNT2 1141 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 ENO4A6NNW6 628 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 FAM86B1E9PN63 330 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 VWA5AO00534 786 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 ANGPT2O15123 496 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 CD3EAPO15446 510 aaKnown RBP3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 VEGFDO43915 354 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 CDC14BO60729 498 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 HNRNPCL1O60812 293 aaKnown RBP3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 E2F6O75461 281 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 RPP40O75818 363 aaKnown RBP3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 DNAJB5O75953 348 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 RASAL1O95294 804 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 DDAH2O95865 285 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 POMCP01189 267 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 RB1P06400 928 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 WEE2P0C1S8 567 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 ARP10275 920 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 SRCP12931 536 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 CR2P20023 1033 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 PCSK1P29120 753 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 GDI1P31150 447 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 GUCY1A2P33402 732 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 SOX6P35712 828 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 PBX3P40426 434 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 ALDH1A3P47895 512 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 ARCN1P48444 511 aaKnown RBP3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 BMXP51813 675 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 STAT2P52630 851 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 ZNF135P52742 658 aaPredicted RBP3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 GBX2P52951 348 aaPredicted RBP3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 STX1BP61266 288 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 OLR1P78380 273 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 GOLGA8DPQ0D2H9 430 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 SF3A3Q12874 501 aaKnown RBP eCLIP3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 RIPK1Q13546 671 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 TRA2AQ13595 282 aaKnown RBP eCLIP3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 EIF4HQ15056 248 aaKnown RBP3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 PDK1Q15118 436 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 NPY5RQ15761 445 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 C15orf59Q2T9L4 293 aaPredicted RBP3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 TBRG1Q3YBR2 411 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 XKR9Q5GH70 373 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 FAM47AQ5JRC9 791 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 EPHA10Q5JZY3 1008 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 DNTTIP2Q5QJE6 756 aaKnown RBP3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 PHF19Q5T6S3 580 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 FAM160B1Q5W0V3 765 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 AFMIDQ63HM1 303 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 OTUD7BQ6GQQ9 843 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 HMBOX1Q6NT76 420 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 ZNF529Q6P280 563 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 ARHGAP11AQ6P4F7 1023 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 MTHFD1LQ6UB35 978 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 ZDHHC24Q6UX98 284 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 ZNF365Q70YC5 407 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 PARS2Q7L3T8 475 aaKnown RBP3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 ZNF572Q7Z3I7 529 aaPredicted RBP3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 MIER3Q7Z3K6 550 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 CACNA2D4Q7Z3S7 1137 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 USP37Q86T82 979 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 HOOK3Q86VS8 718 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 RHPN2Q8IUC4 686 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 TICAM1Q8IUC6 712 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 VPS52Q8N1B4 723 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 MINDY1Q8N5J2 469 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 ANKRD53Q8N9V6 530 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 REPS2Q8NFH8 660 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 OR6C4Q8NGE1 309 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 RFWD2Q8NHY2 731 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 IL17DQ8TAD2 202 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 NEK9Q8TD19 979 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 WASF1Q92558 559 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 PRCCQ92733 491 aaPredicted RBP3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 SCAMP4Q969E2 229 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 INTS12Q96CB8 462 aaKnown RBP3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 RBM14Q96PK6 669 aaKnown RBP3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 PPP1R10Q96QC0 940 aaKnown RBP3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 MRI1Q9BV20 369 aa3.9□□□□□ -1.79
AC055720.1-201ENST00000539552 HEMGNQ9BXL5 484 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms