RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 PABPC1P11940 636 aaKnown RBP14.57□□□□□ -0.08
CACNB1-206ENST00000539338 TCF3P15923 654 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 POLR2EP19388 210 aaKnown RBP14.57□□□□□ -0.08
CACNB1-206ENST00000539338 ARL2P36404 184 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 TNK2Q07912 1038 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 TRAF3Q13114 568 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 VWA5B1Q5TIE3 1220 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 ADGRD1Q6QNK2 874 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 POTEHQ6S545 545 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 ARHGAP36Q6ZRI8 547 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 TLCD1Q96CP7 247 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 RNFT2Q96EX2 444 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 ST6GALNAC4Q9H4F1 302 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 CHRAC1Q9NRG0 131 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 FAM105AQ9NUU6 356 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 PRKAG3Q9UGI9 489 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 SLC12A4Q9UP95 1085 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 NFATC1O95644 943 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 LACTB2Q53H82 288 aaPredicted RBP14.57□□□□□ -0.08
CACNB1-206ENST00000539338 RBM44Q6ZP01 1051 aaKnown RBP14.57□□□□□ -0.08
CACNB1-206ENST00000539338 ZBTB46Q86UZ6 589 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 NPAS4Q8IUM7 802 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 OR4L1Q8NH43 312 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 PPTC7Q8NI37 304 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 ARHGAP9Q9BRR9 750 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 CEP44Q9C0F1 390 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 GLOD4Q9HC38 313 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 KPNA4O00629 521 aaPredicted RBP14.57□□□□□ -0.08
CACNB1-206ENST00000539338 TPSB2P20231 275 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 RPL9P32969 192 aaKnown RBP14.57□□□□□ -0.08
CACNB1-206ENST00000539338 DCTN2Q13561 401 aaKnown RBP14.57□□□□□ -0.08
CACNB1-206ENST00000539338 TPSAB1Q15661 275 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 TEX44Q53QW1 395 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 FAM46CQ5VWP2 391 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 CNSTQ6PJW8 725 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 CUZD1Q86UP6 607 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 LRRC49Q8IUZ0 686 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 KBTBD2Q8IY47 623 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 CLYBLQ8N0X4 340 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 NECTIN4Q96NY8 510 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 CCDC3Q9BQI4 270 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 OSBPL7Q9BZF2 842 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 NDRG2Q9UN36 371 aaKnown RBP14.57□□□□□ -0.08
CACNB1-206ENST00000539338 SNX6Q9UNH7 406 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 RPL26L1Q9UNX3 145 aaKnown RBP14.57□□□□□ -0.08
CACNB1-206ENST00000539338 KCPQ6ZWJ8 1503 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 LOC100506127A0A0U1RQW1 187 aa14.56□□□□□ -0.08
CACNB1-206ENST00000539338 CATP04040 527 aaKnown RBP14.56□□□□□ -0.08
CACNB1-206ENST00000539338 PTPN3P26045 913 aa14.56□□□□□ -0.08
CACNB1-206ENST00000539338 TALDO1P37837 337 aa14.56□□□□□ -0.08
CACNB1-206ENST00000539338 EIF2B2P49770 351 aaKnown RBP14.56□□□□□ -0.08
CACNB1-206ENST00000539338 ST13P50502 369 aaKnown RBP14.56□□□□□ -0.08
CACNB1-206ENST00000539338 KLF10Q13118 480 aa14.56□□□□□ -0.08
CACNB1-206ENST00000539338 PROX1Q92786 737 aa14.56□□□□□ -0.08
CACNB1-206ENST00000539338 LINGO1Q96FE5 620 aa14.56□□□□□ -0.08
CACNB1-206ENST00000539338 DHRS12A0PJE2 317 aa14.56□□□□□ -0.08
CACNB1-206ENST00000539338 WBP4O75554 376 aaKnown RBP14.56□□□□□ -0.08
CACNB1-206ENST00000539338 RPL5P46777 297 aaKnown RBP14.56□□□□□ -0.08
CACNB1-206ENST00000539338 LSM3P62310 102 aaKnown RBP14.56□□□□□ -0.08
CACNB1-206ENST00000539338 ITGADQ13349 1161 aa14.56□□□□□ -0.08
CACNB1-206ENST00000539338 PYROXD2Q8N2H3 581 aa14.56□□□□□ -0.08
CACNB1-206ENST00000539338 DPP10Q8N608 796 aa14.56□□□□□ -0.08
CACNB1-206ENST00000539338 TCF25Q9BQ70 676 aa14.56□□□□□ -0.08
CACNB1-206ENST00000539338 POLR1BQ9H9Y6 1135 aa14.56□□□□□ -0.08
CACNB1-206ENST00000539338 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.56□□□□□ -0.08
CACNB1-206ENST00000539338 DMAC2Q9NW81 257 aa14.56□□□□□ -0.08
CACNB1-206ENST00000539338 TRAF6Q9Y4K3 522 aa14.56□□□□□ -0.08
CACNB1-206ENST00000539338 COPG1Q9Y678 874 aaKnown RBP14.56□□□□□ -0.08
CACNB1-206ENST00000539338 HDCP19113 662 aa14.56□□□□□ -0.08
CACNB1-206ENST00000539338 NOS3P29474 1203 aa14.56□□□□□ -0.08
CACNB1-206ENST00000539338 SLC20A2Q08357 652 aa14.56□□□□□ -0.08
CACNB1-206ENST00000539338 DLG2Q15700 870 aa14.56□□□□□ -0.08
CACNB1-206ENST00000539338 ATAD3BQ5T9A4 648 aa14.56□□□□□ -0.08
CACNB1-206ENST00000539338 AAGABQ6PD74 315 aa14.56□□□□□ -0.08
CACNB1-206ENST00000539338 CFAP52Q8N1V2 620 aa14.56□□□□□ -0.08
CACNB1-206ENST00000539338 SLC4A11Q8NBS3 891 aa14.56□□□□□ -0.08
CACNB1-206ENST00000539338 HDHD2Q9H0R4 259 aa14.56□□□□□ -0.08
CACNB1-206ENST00000539338 NOL6Q9H6R4 1146 aaKnown RBP14.56□□□□□ -0.08
CACNB1-206ENST00000539338 PRPF19Q9UMS4 504 aaKnown RBP14.56□□□□□ -0.08
CACNB1-206ENST00000539338 IGKV6D-41A0A0C4DH26 115 aa14.56□□□□□ -0.08
CACNB1-206ENST00000539338 WFS1O76024 890 aa14.56□□□□□ -0.08
CACNB1-206ENST00000539338 FECHP22830 423 aa14.56□□□□□ -0.08
CACNB1-206ENST00000539338 PRKG2Q13237 762 aa14.56□□□□□ -0.08
CACNB1-206ENST00000539338 CPSF6Q16630 551 aaKnown RBP eCLIP14.56□□□□□ -0.08
CACNB1-206ENST00000539338 CCDC185Q8N715 623 aa14.56□□□□□ -0.08
CACNB1-206ENST00000539338 FNIP1Q8TF40 1166 aa14.56□□□□□ -0.08
CACNB1-206ENST00000539338 CLEC4DQ8WXI8 215 aa14.56□□□□□ -0.08
CACNB1-206ENST00000539338 PPP3R2Q96LZ3 170 aa14.56□□□□□ -0.08
CACNB1-206ENST00000539338 MRPS26Q9BYN8 205 aaKnown RBP14.56□□□□□ -0.08
CACNB1-206ENST00000539338 PDZD7Q9H5P4 517 aa14.56□□□□□ -0.08
CACNB1-206ENST00000539338 DHX33Q9H6R0 707 aaKnown RBP14.56□□□□□ -0.08
CACNB1-206ENST00000539338 PCDH12Q9NPG4 1184 aa14.56□□□□□ -0.08
CACNB1-206ENST00000539338 PCDHGC3Q9UN70 934 aa14.56□□□□□ -0.08
CACNB1-206ENST00000539338 PIPSLA2A3N6 862 aa14.56□□□□□ -0.08
CACNB1-206ENST00000539338 TRIM43BA6NCK2 446 aa14.56□□□□□ -0.08
CACNB1-206ENST00000539338 LPOP22079 712 aaPredicted RBP14.56□□□□□ -0.08
CACNB1-206ENST00000539338 NR1H2P55055 460 aa14.56□□□□□ -0.08
CACNB1-206ENST00000539338 PTP4A2Q12974 167 aa14.56□□□□□ -0.08
CACNB1-206ENST00000539338 TSNQ15631 228 aaKnown RBP14.56□□□□□ -0.08
CACNB1-206ENST00000539338 ABRAXAS1Q6UWZ7 409 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms