RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.97□□□□□ -1.61
CCDC7-209ENST00000539197 THAP4Q8WY91 577 aa4.97□□□□□ -1.61
CCDC7-209ENST00000539197 CDCA5Q96FF9 252 aa4.97□□□□□ -1.61
CCDC7-209ENST00000539197 HAUS8Q9BT25 410 aa4.97□□□□□ -1.61
CCDC7-209ENST00000539197 STN1Q9H668 368 aaKnown RBP4.97□□□□□ -1.61
CCDC7-209ENST00000539197 PCDH9Q9HC56 1237 aa4.97□□□□□ -1.61
CCDC7-209ENST00000539197 MCM9Q9NXL9 1143 aa4.97□□□□□ -1.61
CCDC7-209ENST00000539197 C17orf113A0A1B0GUU1 675 aa4.96□□□□□ -1.62
CCDC7-209ENST00000539197 FAM90A7PA6NKC0 464 aa4.96□□□□□ -1.62
CCDC7-209ENST00000539197 FAM90A22PA8MWA6 464 aa4.96□□□□□ -1.62
CCDC7-209ENST00000539197 FAM90A12PA8MX19 464 aa4.96□□□□□ -1.62
CCDC7-209ENST00000539197 FAM90A23PA8MXZ1 464 aa4.96□□□□□ -1.62
CCDC7-209ENST00000539197 AKR1B15C9JRZ8 316 aaPredicted RBP4.96□□□□□ -1.62
CCDC7-209ENST00000539197 PER2O15055 1255 aa4.96□□□□□ -1.62
CCDC7-209ENST00000539197 TK1P04183 234 aa4.96□□□□□ -1.62
CCDC7-209ENST00000539197 G6PDP11413 515 aa4.96□□□□□ -1.62
CCDC7-209ENST00000539197 TMPOP42166 694 aaKnown RBP4.96□□□□□ -1.62
CCDC7-209ENST00000539197 TRIM14Q14142 442 aa4.96□□□□□ -1.62
CCDC7-209ENST00000539197 CTXN3Q4LDR2 81 aa4.96□□□□□ -1.62
CCDC7-209ENST00000539197 KCNT1Q5JUK3 1230 aa4.96□□□□□ -1.62
CCDC7-209ENST00000539197 CCSAPQ6IQ19 270 aaPredicted RBP4.96□□□□□ -1.62
CCDC7-209ENST00000539197 CHERPQ8IWX8 916 aaKnown RBP4.96□□□□□ -1.62
CCDC7-209ENST00000539197 KIAA2013Q8IYS2 634 aa4.96□□□□□ -1.62
CCDC7-209ENST00000539197 VPS37AQ8NEZ2 397 aa4.96□□□□□ -1.62
CCDC7-209ENST00000539197 CNOT9Q92600 299 aaKnown RBP4.96□□□□□ -1.62
CCDC7-209ENST00000539197 ANKRD9Q96BM1 317 aaPredicted RBP4.96□□□□□ -1.62
CCDC7-209ENST00000539197 LITAFQ99732 161 aa4.96□□□□□ -1.62
CCDC7-209ENST00000539197 EPHX3Q9H6B9 360 aa4.96□□□□□ -1.62
CCDC7-209ENST00000539197 CNGB3Q9NQW8 809 aa4.96□□□□□ -1.62
CCDC7-209ENST00000539197 SMYD2Q9NRG4 433 aa4.96□□□□□ -1.62
CCDC7-209ENST00000539197 PMS2P5A8MQ11 134 aa4.95□□□□□ -1.62
CCDC7-209ENST00000539197 ANP32CO43423 234 aa4.95□□□□□ -1.62
CCDC7-209ENST00000539197 USP8P40818 1118 aa4.95□□□□□ -1.62
CCDC7-209ENST00000539197 HTR3AP46098 478 aa4.95□□□□□ -1.62
CCDC7-209ENST00000539197 SEC61BP60468 96 aaKnown RBP4.95□□□□□ -1.62
CCDC7-209ENST00000539197 CHRNDQ07001 517 aa4.95□□□□□ -1.62
CCDC7-209ENST00000539197 PPIGQ13427 754 aaKnown RBP eCLIP4.95□□□□□ -1.62
CCDC7-209ENST00000539197 CTF1Q16619 201 aa4.95□□□□□ -1.62
CCDC7-209ENST00000539197 CCDC174Q6PII3 467 aa4.95□□□□□ -1.62
CCDC7-209ENST00000539197 KMT5CQ86Y97 462 aa4.95□□□□□ -1.62
CCDC7-209ENST00000539197 ZNF34Q8IZ26 560 aa4.95□□□□□ -1.62
CCDC7-209ENST00000539197 MXRA8Q9BRK3 442 aa4.95□□□□□ -1.62
CCDC7-209ENST00000539197 MROH8Q9H579 483 aa4.95□□□□□ -1.62
CCDC7-209ENST00000539197 FAM118AQ9NWS6 357 aa4.95□□□□□ -1.62
CCDC7-209ENST00000539197 DVL1O14640 695 aa4.94□□□□□ -1.62
CCDC7-209ENST00000539197 WEE2P0C1S8 567 aa4.94□□□□□ -1.62
CCDC7-209ENST00000539197 SLC2A4P14672 509 aa4.94□□□□□ -1.62
CCDC7-209ENST00000539197 DVL1P1P54792 670 aaPredicted RBP4.94□□□□□ -1.62
CCDC7-209ENST00000539197 POSTNQ15063 836 aa4.94□□□□□ -1.62
CCDC7-209ENST00000539197 EIF2S3LQ2VIR3 472 aaKnown RBP4.94□□□□□ -1.62
CCDC7-209ENST00000539197 ARHGAP17Q68EM7 881 aa4.94□□□□□ -1.62
CCDC7-209ENST00000539197 ZNF497Q6ZNH5 498 aa4.94□□□□□ -1.62
CCDC7-209ENST00000539197 MYLK4Q86YV6 388 aaPredicted RBP4.94□□□□□ -1.62
CCDC7-209ENST00000539197 WDR63Q8IWG1 891 aa4.94□□□□□ -1.62
CCDC7-209ENST00000539197 DSELQ8IZU8 1212 aa4.94□□□□□ -1.62
CCDC7-209ENST00000539197 TMEM57Q8N5G2 664 aa4.94□□□□□ -1.62
CCDC7-209ENST00000539197 SCCPDHQ8NBX0 429 aa4.94□□□□□ -1.62
CCDC7-209ENST00000539197 AGBL3Q8NEM8 1001 aa4.94□□□□□ -1.62
CCDC7-209ENST00000539197 CEP70Q8NHQ1 597 aa4.94□□□□□ -1.62
CCDC7-209ENST00000539197 ABTB1Q969K4 478 aaPredicted RBP4.94□□□□□ -1.62
CCDC7-209ENST00000539197 LGALS12Q96DT0 336 aa4.94□□□□□ -1.62
CCDC7-209ENST00000539197 ZNF583Q96ND8 569 aa4.94□□□□□ -1.62
CCDC7-209ENST00000539197 LRRC1Q9BTT6 524 aa4.94□□□□□ -1.62
CCDC7-209ENST00000539197 KCNN2Q9H2S1 579 aa4.94□□□□□ -1.62
CCDC7-209ENST00000539197 ESRP2Q9H6T0 727 aaKnown RBP4.94□□□□□ -1.62
CCDC7-209ENST00000539197 PLCB1Q9NQ66 1216 aa4.94□□□□□ -1.62
CCDC7-209ENST00000539197 GDAQ9Y2T3 454 aa4.94□□□□□ -1.62
CCDC7-209ENST00000539197 DAAM1Q9Y4D1 1078 aa4.94□□□□□ -1.62
CCDC7-209ENST00000539197 TP53BP1Q12888 1972 aaPredicted RBP4.93□□□□□ -1.62
CCDC7-209ENST00000539197 EXTL3O43909 919 aa4.93□□□□□ -1.62
CCDC7-209ENST00000539197 TUBBP07437 444 aa4.93□□□□□ -1.62
CCDC7-209ENST00000539197 CYC1P08574 325 aa4.93□□□□□ -1.62
CCDC7-209ENST00000539197 DDIT3P35638 169 aa4.93□□□□□ -1.62
CCDC7-209ENST00000539197 ACTR2P61160 394 aa4.93□□□□□ -1.62
CCDC7-209ENST00000539197 TUBB4BP68371 445 aa4.93□□□□□ -1.62
CCDC7-209ENST00000539197 SLC1A5Q15758 541 aa4.93□□□□□ -1.62
CCDC7-209ENST00000539197 TRNP1Q6NT89 227 aa4.93□□□□□ -1.62
CCDC7-209ENST00000539197 MTSS1LQ765P7 747 aa4.93□□□□□ -1.62
CCDC7-209ENST00000539197 MOGAT3Q86VF5 341 aa4.93□□□□□ -1.62
CCDC7-209ENST00000539197 ZNF248Q8NDW4 579 aa4.93□□□□□ -1.62
CCDC7-209ENST00000539197 CADM4Q8NFZ8 388 aa4.93□□□□□ -1.62
CCDC7-209ENST00000539197 PPM1EQ8WY54 764 aa4.93□□□□□ -1.62
CCDC7-209ENST00000539197 ZNF570Q96NI8 536 aa4.93□□□□□ -1.62
CCDC7-209ENST00000539197 TMEM30AQ9NV96 361 aa4.93□□□□□ -1.62
CCDC7-209ENST00000539197 FEM1BQ9UK73 627 aa4.93□□□□□ -1.62
CCDC7-209ENST00000539197 PADI1Q9ULC6 663 aa4.93□□□□□ -1.62
CCDC7-209ENST00000539197 AMDHD2Q9Y303 409 aa4.93□□□□□ -1.62
CCDC7-209ENST00000539197 SMAD5-AS1Q9Y6J3 95 aa4.93□□□□□ -1.62
CCDC7-209ENST00000539197 TAF1P21675 1872 aa4.92□□□□□ -1.62
CCDC7-209ENST00000539197 PEX12O00623 359 aa4.92□□□□□ -1.62
CCDC7-209ENST00000539197 S1PR1P21453 382 aa4.92□□□□□ -1.62
CCDC7-209ENST00000539197 GNL1P36915 607 aaPredicted RBP4.92□□□□□ -1.62
CCDC7-209ENST00000539197 CLCNKAP51800 687 aa4.92□□□□□ -1.62
CCDC7-209ENST00000539197 GRIK3Q13003 919 aa4.92□□□□□ -1.62
CCDC7-209ENST00000539197 ZNF876PQ49A33 203 aa4.92□□□□□ -1.62
CCDC7-209ENST00000539197 PDSS1Q5T2R2 415 aa4.92□□□□□ -1.62
CCDC7-209ENST00000539197 RGMBQ6NW40 437 aa4.92□□□□□ -1.62
CCDC7-209ENST00000539197 SLC36A4Q6YBV0 504 aa4.92□□□□□ -1.62
CCDC7-209ENST00000539197 FAM160B2Q86V87 743 aa4.92□□□□□ -1.62
CCDC7-209ENST00000539197 SUGP1Q8IWZ8 645 aaKnown RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms