RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 ASIC2Q16515 512 aa12.56□□□□□ -0.4
VAMP1-206ENST00000538970 ZNF571Q7Z3V5 609 aaPredicted RBP12.56□□□□□ -0.4
VAMP1-206ENST00000538970 TP53INP2Q8IXH6 220 aa12.56□□□□□ -0.4
VAMP1-206ENST00000538970 GPR156Q8NFN8 814 aa12.56□□□□□ -0.4
VAMP1-206ENST00000538970 OR6C4Q8NGE1 309 aa12.56□□□□□ -0.4
VAMP1-206ENST00000538970 SPOCK2Q92563 424 aa12.56□□□□□ -0.4
VAMP1-206ENST00000538970 WBP1Q96G27 269 aa12.56□□□□□ -0.4
VAMP1-206ENST00000538970 PSKH2Q96QS6 385 aa12.56□□□□□ -0.4
VAMP1-206ENST00000538970 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.56□□□□□ -0.4
VAMP1-206ENST00000538970 EPB41L5Q9HCM4 733 aa12.56□□□□□ -0.4
VAMP1-206ENST00000538970 CWC15Q9P013 229 aaKnown RBP12.56□□□□□ -0.4
VAMP1-206ENST00000538970 CNOT8Q9UFF9 292 aaKnown RBP12.56□□□□□ -0.4
VAMP1-206ENST00000538970 SEPT3Q9UH03 358 aa12.56□□□□□ -0.4
VAMP1-206ENST00000538970 B8ZZF3 427 aa12.55□□□□□ -0.4
VAMP1-206ENST00000538970 GOLGA6L22H0YM25 854 aa12.55□□□□□ -0.4
VAMP1-206ENST00000538970 K7ENP7 123 aa12.55□□□□□ -0.4
VAMP1-206ENST00000538970 DDX3XO00571 662 aaKnown RBP eCLIP12.55□□□□□ -0.4
VAMP1-206ENST00000538970 TNFRSF10CO14798 259 aa12.55□□□□□ -0.4
VAMP1-206ENST00000538970 PLD2O14939 933 aa12.55□□□□□ -0.4
VAMP1-206ENST00000538970 MBD3O95983 291 aa12.55□□□□□ -0.4
VAMP1-206ENST00000538970 PEX11BO96011 259 aa12.55□□□□□ -0.4
VAMP1-206ENST00000538970 FTLP02792 175 aaPredicted RBP12.55□□□□□ -0.4
VAMP1-206ENST00000538970 HOXC4P09017 264 aaPredicted RBP12.55□□□□□ -0.4
VAMP1-206ENST00000538970 KELP23276 732 aa12.55□□□□□ -0.4
VAMP1-206ENST00000538970 CCKBRP32239 447 aa12.55□□□□□ -0.4
VAMP1-206ENST00000538970 TRIM23P36406 574 aa12.55□□□□□ -0.4
VAMP1-206ENST00000538970 PRKCIP41743 596 aa12.55□□□□□ -0.4
VAMP1-206ENST00000538970 SCNN1BP51168 640 aa12.55□□□□□ -0.4
VAMP1-206ENST00000538970 INHBCP55103 352 aa12.55□□□□□ -0.4
VAMP1-206ENST00000538970 POLR2LP62875 67 aaKnown RBP12.55□□□□□ -0.4
VAMP1-206ENST00000538970 SLC10A7Q0GE19 358 aa12.55□□□□□ -0.4
VAMP1-206ENST00000538970 CLN3Q13286 438 aa12.55□□□□□ -0.4
VAMP1-206ENST00000538970 LBRQ14739 615 aaKnown RBP12.55□□□□□ -0.4
VAMP1-206ENST00000538970 ANO6Q4KMQ2 910 aa12.55□□□□□ -0.4
VAMP1-206ENST00000538970 CERCAMQ5T4B2 595 aa12.55□□□□□ -0.4
VAMP1-206ENST00000538970 TMCO4Q5TGY1 634 aa12.55□□□□□ -0.4
VAMP1-206ENST00000538970 INO80CQ6PI98 192 aaPredicted RBP12.55□□□□□ -0.4
VAMP1-206ENST00000538970 OGFOD3Q6PK18 319 aa12.55□□□□□ -0.4
VAMP1-206ENST00000538970 CCNJLQ8IV13 435 aa12.55□□□□□ -0.4
VAMP1-206ENST00000538970 SFTPA2Q8IWL1 248 aa12.55□□□□□ -0.4
VAMP1-206ENST00000538970 PELI3Q8N2H9 469 aa12.55□□□□□ -0.4
VAMP1-206ENST00000538970 LZTR1Q8N653 840 aa12.55□□□□□ -0.4
VAMP1-206ENST00000538970 PAF1Q8N7H5 531 aa12.55□□□□□ -0.4
VAMP1-206ENST00000538970 TTC9Q92623 222 aa12.55□□□□□ -0.4
VAMP1-206ENST00000538970 ZNF653Q96CK0 615 aa12.55□□□□□ -0.4
VAMP1-206ENST00000538970 ZNF599Q96NL3 588 aa12.55□□□□□ -0.4
VAMP1-206ENST00000538970 BPIFA3Q9BQP9 254 aa12.55□□□□□ -0.4
VAMP1-206ENST00000538970 LGR4Q9BXB1 951 aa12.55□□□□□ -0.4
VAMP1-206ENST00000538970 FOXP3Q9BZS1 431 aa12.55□□□□□ -0.4
VAMP1-206ENST00000538970 LRRN3Q9H3W5 708 aa12.55□□□□□ -0.4
VAMP1-206ENST00000538970 WDR26Q9H7D7 661 aa12.55□□□□□ -0.4
VAMP1-206ENST00000538970 ZWILCHQ9H900 591 aa12.55□□□□□ -0.4
VAMP1-206ENST00000538970 MRPL40Q9NQ50 206 aaKnown RBP12.55□□□□□ -0.4
VAMP1-206ENST00000538970 AIPL1Q9NZN9 384 aa12.55□□□□□ -0.4
VAMP1-206ENST00000538970 B4GALT6Q9UBX8 382 aa12.55□□□□□ -0.4
VAMP1-206ENST00000538970 APPL1Q9UKG1 709 aa12.55□□□□□ -0.4
VAMP1-206ENST00000538970 PCDHGA7Q9Y5G6 932 aa12.55□□□□□ -0.4
VAMP1-206ENST00000538970 SCINQ9Y6U3 715 aa12.55□□□□□ -0.4
VAMP1-206ENST00000538970 ANKRD36A6QL64 1941 aa12.54□□□□□ -0.4
VAMP1-206ENST00000538970 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.54□□□□□ -0.4
VAMP1-206ENST00000538970 A0A1W2PQC6 194 aa12.54□□□□□ -0.4
VAMP1-206ENST00000538970 TTC24A2A3L6 582 aaPredicted RBP12.54□□□□□ -0.4
VAMP1-206ENST00000538970 CAPN8A6NHC0 703 aa12.54□□□□□ -0.4
VAMP1-206ENST00000538970 A8MX80 341 aa12.54□□□□□ -0.4
VAMP1-206ENST00000538970 TMX2-CTNND1H3BSU7 103 aa12.54□□□□□ -0.4
VAMP1-206ENST00000538970 HTRA2O43464 458 aaPredicted RBP12.54□□□□□ -0.4
VAMP1-206ENST00000538970 NOBOXO60393 691 aa12.54□□□□□ -0.4
VAMP1-206ENST00000538970 SOCS5O75159 536 aa12.54□□□□□ -0.4
VAMP1-206ENST00000538970 PNLIPP16233 465 aa12.54□□□□□ -0.4
VAMP1-206ENST00000538970 GLB1P16278 677 aa12.54□□□□□ -0.4
VAMP1-206ENST00000538970 CR2P20023 1033 aa12.54□□□□□ -0.4
VAMP1-206ENST00000538970 IL1R2P27930 398 aa12.54□□□□□ -0.4
VAMP1-206ENST00000538970 UGT1A5P35504 534 aa12.54□□□□□ -0.4
VAMP1-206ENST00000538970 PCK1P35558 622 aa12.54□□□□□ -0.4
VAMP1-206ENST00000538970 RENBPP51606 427 aa12.54□□□□□ -0.4
VAMP1-206ENST00000538970 ZNF235Q14590 738 aa12.54□□□□□ -0.4
VAMP1-206ENST00000538970 ACOX1Q15067 660 aa12.54□□□□□ -0.4
VAMP1-206ENST00000538970 DPYSL2Q16555 572 aa12.54□□□□□ -0.4
VAMP1-206ENST00000538970 PNCKQ6P2M8 343 aa12.54□□□□□ -0.4
VAMP1-206ENST00000538970 RAB11FIP2Q7L804 512 aa12.54□□□□□ -0.4
VAMP1-206ENST00000538970 TAF8Q7Z7C8 310 aa12.54□□□□□ -0.4
VAMP1-206ENST00000538970 FBXO39Q8N4B4 442 aa12.54□□□□□ -0.4
VAMP1-206ENST00000538970 TRIM11Q96F44 468 aa12.54□□□□□ -0.4
VAMP1-206ENST00000538970 COQ10AQ96MF6 247 aa12.54□□□□□ -0.4
VAMP1-206ENST00000538970 STRADBQ9C0K7 418 aa12.54□□□□□ -0.4
VAMP1-206ENST00000538970 NAT10Q9H0A0 1025 aaKnown RBP12.54□□□□□ -0.4
VAMP1-206ENST00000538970 TMEM168Q9H0V1 697 aa12.54□□□□□ -0.4
VAMP1-206ENST00000538970 RP1P56715 2156 aa12.54□□□□□ -0.4
VAMP1-206ENST00000538970 UNC79Q9P2D8 2635 aa12.54□□□□□ -0.4
VAMP1-206ENST00000538970 PIEZO2Q9H5I5 2752 aa12.53□□□□□ -0.4
VAMP1-206ENST00000538970 A0A1W2PQ67 120 aa12.53□□□□□ -0.4
VAMP1-206ENST00000538970 PRSS38A1L453 326 aa12.53□□□□□ -0.4
VAMP1-206ENST00000538970 B4DGG1 531 aa12.53□□□□□ -0.4
VAMP1-206ENST00000538970 H3BRJ5 948 aa12.53□□□□□ -0.4
VAMP1-206ENST00000538970 SLC28A2O43868 658 aa12.53□□□□□ -0.4
VAMP1-206ENST00000538970 CPP00450 1065 aa12.53□□□□□ -0.4
VAMP1-206ENST00000538970 MYBL1P10243 752 aa12.53□□□□□ -0.4
VAMP1-206ENST00000538970 MYCLP1P12525 358 aaPredicted RBP12.53□□□□□ -0.4
VAMP1-206ENST00000538970 HGFP14210 728 aa12.53□□□□□ -0.4
VAMP1-206ENST00000538970 TCF4P15884 667 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms