RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	GP1BA	P07359	652 aa		12.34	□□□□□ -0.43
CLTCL1-205	ENST00000538828	ATXN1L	P0C7T5	689 aa	Known RBP	12.34	□□□□□ -0.43
CLTCL1-205	ENST00000538828	GIMD1	P0DJR0	217 aa		12.34	□□□□□ -0.43
CLTCL1-205	ENST00000538828	TSHR	P16473	764 aa		12.34	□□□□□ -0.43
CLTCL1-205	ENST00000538828	ITIH2	P19823	946 aa		12.34	□□□□□ -0.43
CLTCL1-205	ENST00000538828	CTNNA1	P35221	906 aa	Known RBP	12.34	□□□□□ -0.43
CLTCL1-205	ENST00000538828	ACADVL	P49748	655 aa		12.34	□□□□□ -0.43
CLTCL1-205	ENST00000538828	GSDMD	P57764	484 aa		12.34	□□□□□ -0.43
CLTCL1-205	ENST00000538828	MAX	P61244	160 aa		12.34	□□□□□ -0.43
CLTCL1-205	ENST00000538828	E2F1	Q01094	437 aa		12.34	□□□□□ -0.43
CLTCL1-205	ENST00000538828	IL9R	Q01113	521 aa		12.34	□□□□□ -0.43
CLTCL1-205	ENST00000538828	EIF2B5	Q13144	721 aa	Known RBP	12.34	□□□□□ -0.43
CLTCL1-205	ENST00000538828	XRCC4	Q13426	336 aa		12.34	□□□□□ -0.43
CLTCL1-205	ENST00000538828	LRRC73	Q5JTD7	316 aa		12.34	□□□□□ -0.43
CLTCL1-205	ENST00000538828	ZCCHC8	Q6NZY4	707 aa	Known RBP	12.34	□□□□□ -0.43
CLTCL1-205	ENST00000538828	MFSD7	Q6UXD7	560 aa		12.34	□□□□□ -0.43
CLTCL1-205	ENST00000538828	SPOCD1	Q6ZMY3	1216 aa		12.34	□□□□□ -0.43
CLTCL1-205	ENST00000538828	ZNF765	Q7L2R6	523 aa		12.34	□□□□□ -0.43
CLTCL1-205	ENST00000538828	DAAM2	Q86T65	1068 aa		12.34	□□□□□ -0.43
CLTCL1-205	ENST00000538828	TMEM139	Q8IV31	216 aa		12.34	□□□□□ -0.43
CLTCL1-205	ENST00000538828	FSTL5	Q8N475	847 aa	Predicted RBP	12.34	□□□□□ -0.43
CLTCL1-205	ENST00000538828	EID2	Q8N6I1	236 aa		12.34	□□□□□ -0.43
CLTCL1-205	ENST00000538828	PAF1	Q8N7H5	531 aa		12.34	□□□□□ -0.43
CLTCL1-205	ENST00000538828	GATA6	Q92908	595 aa		12.34	□□□□□ -0.43
CLTCL1-205	ENST00000538828	SRPK1	Q96SB4	655 aa	Known RBP	12.34	□□□□□ -0.43
CLTCL1-205	ENST00000538828	APOO	Q9BUR5	198 aa		12.34	□□□□□ -0.43
CLTCL1-205	ENST00000538828	TDRD1	Q9BXT4	1180 aa	Known RBP	12.34	□□□□□ -0.43
CLTCL1-205	ENST00000538828	DNAJC28	Q9NX36	388 aa		12.34	□□□□□ -0.43
CLTCL1-205	ENST00000538828	PCDHA3	Q9Y5H8	950 aa		12.34	□□□□□ -0.43
CLTCL1-205	ENST00000538828	CACNA1B	Q00975	2339 aa		12.34	□□□□□ -0.43
CLTCL1-205	ENST00000538828	ACACA	Q13085	2346 aa		12.33	□□□□□ -0.44
CLTCL1-205	ENST00000538828	hCG_1818297	A0A087WSY0	165 aa		12.33	□□□□□ -0.44
CLTCL1-205	ENST00000538828	RGSL1	A5PLK6	1076 aa		12.33	□□□□□ -0.44
CLTCL1-205	ENST00000538828	LMO7DN	F2Z398	122 aa		12.33	□□□□□ -0.44
CLTCL1-205	ENST00000538828	AQP9	O43315	295 aa		12.33	□□□□□ -0.44
CLTCL1-205	ENST00000538828	HYAL3	O43820	417 aa	Predicted RBP	12.33	□□□□□ -0.44
CLTCL1-205	ENST00000538828	RFPL3	O75679	317 aa		12.33	□□□□□ -0.44
CLTCL1-205	ENST00000538828	RASGRP1	O95267	797 aa		12.33	□□□□□ -0.44
CLTCL1-205	ENST00000538828	HLA-DQB2	P05538	268 aa		12.33	□□□□□ -0.44
CLTCL1-205	ENST00000538828	PROS1	P07225	676 aa		12.33	□□□□□ -0.44
CLTCL1-205	ENST00000538828	CKMT1A	P12532	417 aa		12.33	□□□□□ -0.44
CLTCL1-205	ENST00000538828	JUND	P17535	347 aa		12.33	□□□□□ -0.44
CLTCL1-205	ENST00000538828	GM2A	P17900	193 aa		12.33	□□□□□ -0.44
CLTCL1-205	ENST00000538828	CTNNA2	P26232	953 aa		12.33	□□□□□ -0.44
CLTCL1-205	ENST00000538828	HK3	P52790	923 aa		12.33	□□□□□ -0.44
CLTCL1-205	ENST00000538828	PPARD	Q03181	441 aa		12.33	□□□□□ -0.44
CLTCL1-205	ENST00000538828	ARHGEF7	Q14155	803 aa		12.33	□□□□□ -0.44
CLTCL1-205	ENST00000538828	INPP5A	Q14642	412 aa		12.33	□□□□□ -0.44
CLTCL1-205	ENST00000538828	PRKD1	Q15139	912 aa	Predicted RBP	12.33	□□□□□ -0.44
CLTCL1-205	ENST00000538828	CNGA3	Q16281	694 aa		12.33	□□□□□ -0.44
CLTCL1-205	ENST00000538828	TEX44	Q53QW1	395 aa		12.33	□□□□□ -0.44
CLTCL1-205	ENST00000538828	PNCK	Q6P2M8	343 aa		12.33	□□□□□ -0.44
CLTCL1-205	ENST00000538828	RAD9B	Q6WBX8	426 aa		12.33	□□□□□ -0.44
CLTCL1-205	ENST00000538828	CCNI2	Q6ZMN8	369 aa	Predicted RBP	12.33	□□□□□ -0.44
CLTCL1-205	ENST00000538828	BBS12	Q6ZW61	710 aa		12.33	□□□□□ -0.44
CLTCL1-205	ENST00000538828	RFX6	Q8HWS3	928 aa		12.33	□□□□□ -0.44
CLTCL1-205	ENST00000538828	PHACTR4	Q8IZ21	702 aa		12.33	□□□□□ -0.44
CLTCL1-205	ENST00000538828	NRSN1	Q8IZ57	195 aa		12.33	□□□□□ -0.44
CLTCL1-205	ENST00000538828	SYCE1	Q8N0S2	351 aa		12.33	□□□□□ -0.44
CLTCL1-205	ENST00000538828	CHCHD4	Q8N4Q1	142 aa		12.33	□□□□□ -0.44
CLTCL1-205	ENST00000538828	CNTD1	Q8N815	330 aa		12.33	□□□□□ -0.44
CLTCL1-205	ENST00000538828	KDF1	Q8NAX2	398 aa	Predicted RBP	12.33	□□□□□ -0.44
CLTCL1-205	ENST00000538828	ZNF548	Q8NEK5	533 aa	Predicted RBP	12.33	□□□□□ -0.44
CLTCL1-205	ENST00000538828	KIAA1524	Q8TCG1	905 aa		12.33	□□□□□ -0.44
CLTCL1-205	ENST00000538828	RNF25	Q96BH1	459 aa	Predicted RBP	12.33	□□□□□ -0.44
CLTCL1-205	ENST00000538828	TADA1	Q96BN2	335 aa		12.33	□□□□□ -0.44
CLTCL1-205	ENST00000538828	DTD2	Q96FN9	168 aa		12.33	□□□□□ -0.44
CLTCL1-205	ENST00000538828	LGMN	Q99538	433 aa		12.33	□□□□□ -0.44
CLTCL1-205	ENST00000538828	SLC13A1	Q9BZW2	595 aa		12.33	□□□□□ -0.44
CLTCL1-205	ENST00000538828	CDH19	Q9H159	772 aa		12.33	□□□□□ -0.44
CLTCL1-205	ENST00000538828	SLC25A51	Q9H1U9	297 aa		12.33	□□□□□ -0.44
CLTCL1-205	ENST00000538828	DKK4	Q9UBT3	224 aa		12.33	□□□□□ -0.44
CLTCL1-205	ENST00000538828	REXO2	Q9Y3B8	237 aa	Known RBP	12.33	□□□□□ -0.44
CLTCL1-205	ENST00000538828	HEY1	Q9Y5J3	304 aa		12.33	□□□□□ -0.44
CLTCL1-205	ENST00000538828	IGF2R	P11717	2491 aa		12.32	□□□□□ -0.44
CLTCL1-205	ENST00000538828	RCCD1	A6NED2	376 aa		12.32	□□□□□ -0.44
CLTCL1-205	ENST00000538828	CAPN8	A6NHC0	703 aa		12.32	□□□□□ -0.44
CLTCL1-205	ENST00000538828	MIF4GD	A9UHW6	222 aa	Known RBP	12.32	□□□□□ -0.44
CLTCL1-205	ENST00000538828	APOC4-APOC2	K7ER74	178 aa		12.32	□□□□□ -0.44
CLTCL1-205	ENST00000538828		K7ESM1	405 aa		12.32	□□□□□ -0.44
CLTCL1-205	ENST00000538828	CACNB4	O00305	520 aa	Predicted RBP	12.32	□□□□□ -0.44
CLTCL1-205	ENST00000538828	SIGLEC6	O43699	453 aa		12.32	□□□□□ -0.44
CLTCL1-205	ENST00000538828	CST8	O60676	142 aa		12.32	□□□□□ -0.44
CLTCL1-205	ENST00000538828	PRL	P01236	227 aa		12.32	□□□□□ -0.44
CLTCL1-205	ENST00000538828	JCHAIN	P01591	159 aa		12.32	□□□□□ -0.44
CLTCL1-205	ENST00000538828	APOC2	P02655	101 aa		12.32	□□□□□ -0.44
CLTCL1-205	ENST00000538828	ALPI	P09923	528 aa		12.32	□□□□□ -0.44
CLTCL1-205	ENST00000538828	CETN2	P41208	172 aa		12.32	□□□□□ -0.44
CLTCL1-205	ENST00000538828	DSC2	Q02487	901 aa		12.32	□□□□□ -0.44
CLTCL1-205	ENST00000538828	ITK	Q08881	620 aa		12.32	□□□□□ -0.44
CLTCL1-205	ENST00000538828	NIPAL4	Q0D2K0	466 aa		12.32	□□□□□ -0.44
CLTCL1-205	ENST00000538828	KIF5A	Q12840	1032 aa		12.32	□□□□□ -0.44
CLTCL1-205	ENST00000538828	ELOC	Q15369	112 aa		12.32	□□□□□ -0.44
CLTCL1-205	ENST00000538828	UNQ6494/PRO21346	Q6UXR6	183 aa		12.32	□□□□□ -0.44
CLTCL1-205	ENST00000538828	TECPR1	Q7Z6L1	1165 aa		12.32	□□□□□ -0.44
CLTCL1-205	ENST00000538828	NT5DC3	Q86UY8	548 aa		12.32	□□□□□ -0.44
CLTCL1-205	ENST00000538828	RNF10	Q8N5U6	811 aa	Known RBP	12.32	□□□□□ -0.44
CLTCL1-205	ENST00000538828	LRRC57	Q8N9N7	239 aa		12.32	□□□□□ -0.44
CLTCL1-205	ENST00000538828	PDCD6IP	Q8WUM4	868 aa	Known RBP	12.32	□□□□□ -0.44
CLTCL1-205	ENST00000538828	TFB1M	Q8WVM0	346 aa	Known RBP	12.32	□□□□□ -0.44

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