RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 ANAPC2Q9UJX6 822 aa6.74□□□□□ -1.33
USP28-207ENST00000538475 AP4E1Q9UPM8 1137 aa6.74□□□□□ -1.33
USP28-207ENST00000538475 MRPL11Q9Y3B7 192 aaKnown RBP6.74□□□□□ -1.33
USP28-207ENST00000538475 PCDHGB1Q9Y5G3 927 aa6.74□□□□□ -1.33
USP28-207ENST00000538475 SNX13Q9Y5W8 968 aa6.74□□□□□ -1.33
USP28-207ENST00000538475 COL2A1P02458 1487 aaPredicted RBP6.73□□□□□ -1.33
USP28-207ENST00000538475 NRXN2Q9P2S2 1712 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 FAM95CA0A1B0GW59 222 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 FAM170AA1A519 330 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 WDR64B1ANS9 1081 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 FAM25AB3EWG3 89 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 FAM25CB3EWG5 89 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 FAM25GB3EWG6 89 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 TCP10L2B9ZVM9 353 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 H7C0C1 242 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 TIMM44O43615 452 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 HYAL3O43820 417 aaPredicted RBP6.73□□□□□ -1.33
USP28-207ENST00000538475 LRCH4O75427 683 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 LYPLA1O75608 230 aaPredicted RBP6.73□□□□□ -1.33
USP28-207ENST00000538475 SORBS2O94875 1100 aaKnown RBP6.73□□□□□ -1.33
USP28-207ENST00000538475 SNX4O95219 450 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 FKBP9O95302 570 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 TRUB2O95900 331 aaKnown RBP6.73□□□□□ -1.33
USP28-207ENST00000538475 ALDOAP04075 364 aaKnown RBP6.73□□□□□ -1.33
USP28-207ENST00000538475 CTSBP07858 339 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 TRAPPC2P0DI81 140 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 TRAPPC2BP0DI82 140 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 CHRNB1P11230 501 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 ENO3P13929 434 aaPredicted RBP6.73□□□□□ -1.33
USP28-207ENST00000538475 PTPN1P18031 435 aaKnown RBP6.73□□□□□ -1.33
USP28-207ENST00000538475 ITIH1P19827 911 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 PSMA4P25789 261 aaKnown RBP6.73□□□□□ -1.33
USP28-207ENST00000538475 TYK2P29597 1187 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 CCND2P30279 289 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 SSTR4P31391 388 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 SHMT1P34896 483 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 RAP1GAPP47736 663 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 ATP5OP48047 213 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 ERFP50548 548 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 KPNA2P52292 529 aaKnown RBP6.73□□□□□ -1.33
USP28-207ENST00000538475 JAK3P52333 1124 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 PPP5CP53041 499 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 EVA1CP58658 441 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 RPL7AP62424 266 aaKnown RBP6.73□□□□□ -1.33
USP28-207ENST00000538475 ADARB1P78563 741 aaKnown RBP6.73□□□□□ -1.33
USP28-207ENST00000538475 GHRHRQ02643 423 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 GAD2Q05329 585 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 HSPA14Q0VDF9 509 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 GALNT1Q10472 559 aaPredicted RBP6.73□□□□□ -1.33
USP28-207ENST00000538475 IL18R1Q13478 541 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 ACOX1Q15067 660 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 DLG2Q15700 870 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 TIGD2Q4W5G0 525 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 SLC9B1Q4ZJI4 515 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 LIPMQ5VYY2 423 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 TTC23Q5W5X9 447 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 IQSEC1Q6DN90 963 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 ALG1LQ6GMV1 187 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 TAF2Q6P1X5 1199 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 SYCE2Q6PIF2 218 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 ZYG11AQ6WRX3 759 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 ZCCHC23Q6ZST2 131 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 TMEM26Q6ZUK4 368 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 GALNT13Q8IUC8 556 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 LGI2Q8N0V4 545 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 ZCCHC7Q8N3Z6 543 aaKnown RBP6.73□□□□□ -1.33
USP28-207ENST00000538475 ARL10Q8N8L6 244 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 RNF169Q8NCN4 708 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 C2CD4AQ8NCU7 369 aaPredicted RBP6.73□□□□□ -1.33
USP28-207ENST00000538475 MCPH1Q8NEM0 835 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 TRPV3Q8NET8 790 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 FBLIM1Q8WUP2 373 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 LRTOMTQ8WZ04 291 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 POMGNT1Q8WZA1 660 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 LPGAT1Q92604 370 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 ATP6V1E2Q96A05 226 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 SLCO4A1Q96BD0 722 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 CCDC126Q96EE4 140 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 FAM84AQ96KN4 292 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 GLT1D1Q96MS3 346 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 TSNARE1Q96NA8 513 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 DACH2Q96NX9 599 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 MCEEQ96PE7 176 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 RNF157Q96PX1 679 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 SLC29A1Q99808 456 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 WDR18Q9BV38 432 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 MRIQ9BWK5 157 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 SEZ6LQ9BYH1 1024 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 ZC3H12CQ9C0D7 883 aaKnown RBP6.73□□□□□ -1.33
USP28-207ENST00000538475 IKZF4Q9H2S9 585 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 ARMC7Q9H6L4 198 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 C12orf10Q9HB07 376 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 PLAC1Q9HBJ0 212 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 TM9SF3Q9HD45 589 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 HPS4Q9NQG7 708 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 XPNPEP3Q9NQH7 507 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 TMEM39AQ9NV64 488 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 INTS10Q9NVR2 710 aaKnown RBP6.73□□□□□ -1.33
USP28-207ENST00000538475 ACTR3BQ9P1U1 418 aa6.73□□□□□ -1.33
USP28-207ENST00000538475 ENPP5Q9UJA9 477 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms