RNA–Protein interactions for RNA: ENST00000538335.1

LINC01089-207, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 3 BASIC

Gene LINC01089, Length 630 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-207ENST00000538335 DEF6Q9H4E7 631 aa28.33■■■□□ 2.13
LINC01089-207ENST00000538335 WDR26Q9H7D7 661 aa28.33■■■□□ 2.13
LINC01089-207ENST00000538335 ZNHIT6Q9NWK9 470 aaKnown RBP28.33■■■□□ 2.13
LINC01089-207ENST00000538335 CTTNBP2NLQ9P2B4 639 aa28.33■■■□□ 2.13
LINC01089-207ENST00000538335 GULP1Q9UBP9 304 aa28.33■■■□□ 2.13
LINC01089-207ENST00000538335 PCDHGC4Q9Y5F7 938 aa28.33■■■□□ 2.13
LINC01089-207ENST00000538335 TNFRSF10CO14798 259 aa28.32■■■□□ 2.12
LINC01089-207ENST00000538335 PEX11BO96011 259 aa28.32■■■□□ 2.12
LINC01089-207ENST00000538335 TPM1P09493 284 aa28.32■■■□□ 2.12
LINC01089-207ENST00000538335 TGM2P21980 687 aa28.32■■■□□ 2.12
LINC01089-207ENST00000538335 HNRNPH3P31942 346 aaKnown RBP28.32■■■□□ 2.12
LINC01089-207ENST00000538335 VIPR1P32241 457 aa28.32■■■□□ 2.12
LINC01089-207ENST00000538335 TSR1Q2NL82 804 aaKnown RBP28.32■■■□□ 2.12
LINC01089-207ENST00000538335 TIGD7Q6NT04 549 aaPredicted RBP28.32■■■□□ 2.12
LINC01089-207ENST00000538335 PCDH19Q8TAB3 1148 aa28.32■■■□□ 2.12
LINC01089-207ENST00000538335 NOD2Q9HC29 1040 aa28.32■■■□□ 2.12
LINC01089-207ENST00000538335 GPR34Q9UPC5 381 aa28.32■■■□□ 2.12
LINC01089-207ENST00000538335 DXOO77932 396 aaKnown RBP28.31■■■□□ 2.12
LINC01089-207ENST00000538335 TRIM23P36406 574 aa28.31■■■□□ 2.12
LINC01089-207ENST00000538335 PDK2Q15119 407 aa28.31■■■□□ 2.12
LINC01089-207ENST00000538335 ARMC12Q5T9G4 340 aa28.31■■■□□ 2.12
LINC01089-207ENST00000538335 USP45Q70EL2 814 aa28.31■■■□□ 2.12
LINC01089-207ENST00000538335 KCTD6Q8NC69 237 aa28.31■■■□□ 2.12
LINC01089-207ENST00000538335 FAM71BQ8TC56 605 aa28.31■■■□□ 2.12
LINC01089-207ENST00000538335 FUBP1Q96AE4 644 aaKnown RBP28.31■■■□□ 2.12
LINC01089-207ENST00000538335 NUS1Q96E22 293 aa28.31■■■□□ 2.12
LINC01089-207ENST00000538335 RBM15Q96T37 977 aaKnown RBP eCLIP28.31■■■□□ 2.122e-7■□□□□ 9.6
LINC01089-207ENST00000538335 ZNF670Q9BS34 389 aa28.31■■■□□ 2.12
LINC01089-207ENST00000538335 XPO4Q9C0E2 1151 aaKnown RBP28.31■■■□□ 2.12
LINC01089-207ENST00000538335 ANKRD36A6QL64 1941 aa28.31■■■□□ 2.12
LINC01089-207ENST00000538335 ASXL3Q9C0F0 2248 aa28.31■■■□□ 2.12
LINC01089-207ENST00000538335 ITPR1Q14643 2758 aa28.3■■■□□ 2.12
LINC01089-207ENST00000538335 LRRK1Q38SD2 2015 aa28.3■■■□□ 2.12
LINC01089-207ENST00000538335 PSMD11O00231 422 aa28.3■■■□□ 2.12
LINC01089-207ENST00000538335 PROSCO94903 275 aa28.3■■■□□ 2.12
LINC01089-207ENST00000538335 MPOP05164 745 aa28.3■■■□□ 2.12
LINC01089-207ENST00000538335 KRT7P08729 469 aa28.3■■■□□ 2.12
LINC01089-207ENST00000538335 CES1P23141 567 aa28.3■■■□□ 2.12
LINC01089-207ENST00000538335 PCBP4P57723 403 aaKnown RBP28.3■■■□□ 2.12
LINC01089-207ENST00000538335 ERVPABLB-1P60509 514 aa28.3■■■□□ 2.12
LINC01089-207ENST00000538335 ARHGEF7Q14155 803 aa28.3■■■□□ 2.12
LINC01089-207ENST00000538335 SPIDRQ14159 915 aa28.3■■■□□ 2.12
LINC01089-207ENST00000538335 PNCKQ6P2M8 343 aa28.3■■■□□ 2.12
LINC01089-207ENST00000538335 PLA2G15Q8NCC3 412 aa28.3■■■□□ 2.12
LINC01089-207ENST00000538335 ZNF248Q8NDW4 579 aa28.3■■■□□ 2.12
LINC01089-207ENST00000538335 CCDC3Q9BQI4 270 aa28.3■■■□□ 2.12
LINC01089-207ENST00000538335 POLR1EQ9GZS1 481 aaKnown RBP28.3■■■□□ 2.12
LINC01089-207ENST00000538335 PHPT1Q9NRX4 125 aaPredicted RBP28.3■■■□□ 2.12
LINC01089-207ENST00000538335 THSD1Q9NS62 852 aa28.3■■■□□ 2.12
LINC01089-207ENST00000538335 SIRPGQ9P1W8 387 aa28.3■■■□□ 2.12
LINC01089-207ENST00000538335 A8MX80 341 aa28.29■■■□□ 2.12
LINC01089-207ENST00000538335 HEXIM1O94992 359 aaKnown RBP28.29■■■□□ 2.12
LINC01089-207ENST00000538335 GJC1P36383 396 aa28.29■■■□□ 2.12
LINC01089-207ENST00000538335 SLC18A3Q16572 532 aa28.29■■■□□ 2.12
LINC01089-207ENST00000538335 PERM1Q5SV97 790 aa28.29■■■□□ 2.12
LINC01089-207ENST00000538335 SPECC1LQ69YQ0 1117 aa28.29■■■□□ 2.12
LINC01089-207ENST00000538335 PGBD5Q8N414 524 aa28.29■■■□□ 2.12
LINC01089-207ENST00000538335 OR8K1Q8NGG5 319 aa28.29■■■□□ 2.12
LINC01089-207ENST00000538335 PDXPQ96GD0 296 aa28.29■■■□□ 2.12
LINC01089-207ENST00000538335 COQ10AQ96MF6 247 aa28.29■■■□□ 2.12
LINC01089-207ENST00000538335 SYNDIG1Q9H7V2 258 aa28.29■■■□□ 2.12
LINC01089-207ENST00000538335 AMACRQ9UHK6 382 aa28.29■■■□□ 2.12
LINC01089-207ENST00000538335 PGLSO95336 258 aa28.28■■■□□ 2.12
LINC01089-207ENST00000538335 CELA2BP08218 269 aaPredicted RBP28.28■■■□□ 2.12
LINC01089-207ENST00000538335 MX2P20592 715 aa28.28■■■□□ 2.12
LINC01089-207ENST00000538335 CA4P22748 312 aa28.28■■■□□ 2.12
LINC01089-207ENST00000538335 RBMS1P29558 406 aaKnown RBP28.28■■■□□ 2.12
LINC01089-207ENST00000538335 GARSP41250 739 aaKnown RBP28.28■■■□□ 2.12
LINC01089-207ENST00000538335 MAXP61244 160 aa28.28■■■□□ 2.12
LINC01089-207ENST00000538335 ITKQ08881 620 aa28.28■■■□□ 2.12
LINC01089-207ENST00000538335 PAFAH1B3Q15102 231 aaKnown RBP28.28■■■□□ 2.12
LINC01089-207ENST00000538335 CNGA3Q16281 694 aa28.28■■■□□ 2.12
LINC01089-207ENST00000538335 ZFYVE27Q5T4F4 411 aa28.28■■■□□ 2.12
LINC01089-207ENST00000538335 CRTC1Q6UUV9 634 aa28.28■■■□□ 2.12
LINC01089-207ENST00000538335 TAF8Q7Z7C8 310 aa28.28■■■□□ 2.12
LINC01089-207ENST00000538335 TEX26Q8N6G2 289 aa28.28■■■□□ 2.12
LINC01089-207ENST00000538335 KYQ8NBH2 561 aa28.28■■■□□ 2.12
LINC01089-207ENST00000538335 SCRN2Q96FV2 425 aa28.28■■■□□ 2.12
LINC01089-207ENST00000538335 LGMNQ99538 433 aa28.28■■■□□ 2.12
LINC01089-207ENST00000538335 ANP32EQ9BTT0 268 aa28.28■■■□□ 2.12
LINC01089-207ENST00000538335 NT5MQ9NPB1 228 aa28.28■■■□□ 2.12
LINC01089-207ENST00000538335 SSU72P8A0A1W2PR75 194 aa28.27■■■□□ 2.12
LINC01089-207ENST00000538335 TTC24A2A3L6 582 aaPredicted RBP28.27■■■□□ 2.12
LINC01089-207ENST00000538335 TMEM202A6NGA9 273 aa28.27■■■□□ 2.12
LINC01089-207ENST00000538335 TMX2-CTNND1H3BSU7 103 aa28.27■■■□□ 2.12
LINC01089-207ENST00000538335 MYCLP1P12525 358 aaPredicted RBP28.27■■■□□ 2.12
LINC01089-207ENST00000538335 IL4RP24394 825 aa28.27■■■□□ 2.12
LINC01089-207ENST00000538335 GALNT2Q10471 571 aa28.27■■■□□ 2.12
LINC01089-207ENST00000538335 TRAF2Q12933 501 aa28.27■■■□□ 2.12
LINC01089-207ENST00000538335 MMRN1Q13201 1228 aa28.27■■■□□ 2.12
LINC01089-207ENST00000538335 DPYSL3Q14195 570 aa28.27■■■□□ 2.12
LINC01089-207ENST00000538335 IFI16Q16666 785 aaKnown RBP28.27■■■□□ 2.12
LINC01089-207ENST00000538335 IGF2-ASQ6U949 168 aa28.27■■■□□ 2.12
LINC01089-207ENST00000538335 OR1E3Q8WZA6 343 aa28.27■■■□□ 2.12
LINC01089-207ENST00000538335 NSMCE3Q96MG7 304 aa28.27■■■□□ 2.12
LINC01089-207ENST00000538335 FGF22Q9HCT0 170 aa28.27■■■□□ 2.12
LINC01089-207ENST00000538335 MOSPD1Q9UJG1 213 aa28.27■■■□□ 2.12
LINC01089-207ENST00000538335 DNPEPQ9ULA0 475 aa28.27■■■□□ 2.12
LINC01089-207ENST00000538335 NENFQ9UMX5 172 aa28.27■■■□□ 2.12
LINC01089-207ENST00000538335 NBEAQ8NFP9 2946 aa28.26■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms