RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 MEI1Q5TIA1 1274 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 LRRC66Q68CR7 880 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 PM20D1Q6GTS8 502 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 TTC17Q96AE7 1141 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 STAMBPL1Q96FJ0 436 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 C6orf106Q9H6K1 298 aaPredicted RBP7.27□□□□□ -1.25
MSH6-209ENST00000538136 CSNK1G1Q9HCP0 422 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 INTS6Q9UL03 887 aaKnown RBP7.27□□□□□ -1.25
MSH6-209ENST00000538136 USP3Q9Y6I4 520 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 AK5Q9Y6K8 562 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 STAU1O95793 577 aaKnown RBP7.27□□□□□ -1.25
MSH6-209ENST00000538136 KITP10721 976 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 MC4RP32245 332 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 GRIA3P42263 894 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 SERPINH1P50454 418 aaKnown RBP7.27□□□□□ -1.25
MSH6-209ENST00000538136 NEK3P51956 506 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 UGP2Q16851 508 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 CFAP157Q5JU67 520 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 NCBP2-AS2Q69YL0 99 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 ESRP1Q6NXG1 681 aaKnown RBP7.27□□□□□ -1.25
MSH6-209ENST00000538136 IRGCQ6NXR0 463 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 RALGPS2Q86X27 583 aaPredicted RBP7.27□□□□□ -1.25
MSH6-209ENST00000538136 PRELID2Q8N945 189 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 KLHDC7BQ96G42 594 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 C8orf33Q9H7E9 229 aaPredicted RBP7.27□□□□□ -1.25
MSH6-209ENST00000538136 SARDHQ9UL12 918 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 AAR2Q9Y312 384 aaKnown RBP7.27□□□□□ -1.25
MSH6-209ENST00000538136 ISM1B1AKI9 464 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 C5orf67F2Z3F1 127 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 I6L893 689 aaPredicted RBP7.26□□□□□ -1.25
MSH6-209ENST00000538136 FPGTO14772 594 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 PRAMEF1O95521 474 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 DRD1P21728 446 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 CASP2P42575 452 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 WHAMMP3Q1A5X7 153 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 TMEM92Q6UXU6 159 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 IL17RCQ8NAC3 791 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 ATXN2LQ8WWM7 1075 aaKnown RBP7.26□□□□□ -1.25
MSH6-209ENST00000538136 HAPLN3Q96S86 360 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 TBL1YQ9BQ87 522 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 PNMA8BQ9ULN7 279 aaPredicted RBP7.26□□□□□ -1.25
MSH6-209ENST00000538136 ILVBLA1L0T0 632 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 RGS16O15492 202 aaPredicted RBP7.26□□□□□ -1.25
MSH6-209ENST00000538136 RNGTTO60942 597 aaKnown RBP7.26□□□□□ -1.25
MSH6-209ENST00000538136 PHF2O75151 1096 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 MOSPD3O75425 235 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 THEGLP0DJG4 465 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 NDUFV2P19404 249 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 ALAS2P22557 587 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 PTPN3P26045 913 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 STIP1P31948 543 aaKnown RBP7.26□□□□□ -1.25
MSH6-209ENST00000538136 ST13P50502 369 aaKnown RBP7.26□□□□□ -1.25
MSH6-209ENST00000538136 PEX5P50542 639 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 YBEYP58557 167 aaPredicted RBP7.26□□□□□ -1.25
MSH6-209ENST00000538136 ELAVL3Q14576 367 aaKnown RBP7.26□□□□□ -1.25
MSH6-209ENST00000538136 SLC9A5Q14940 896 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 PARP15Q460N3 678 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 ANKRD22Q5VYY1 191 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 RBFAQ8N0V3 343 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 GABPB2Q8TAK5 448 aaPredicted RBP7.26□□□□□ -1.25
MSH6-209ENST00000538136 E2F7Q96AV8 911 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 TMEM159Q96B96 161 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 PHF21BQ96EK2 531 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 ZNF778Q96MU6 729 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 ZNF670Q9BS34 389 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 ACBD3Q9H3P7 528 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 SLC2A6Q9UGQ3 507 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 PCNX2A6NKB5 2137 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 RLFQ13129 1914 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 A0A0A0MRY4 1105 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 SHISA7A6NL88 538 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 MTA2O94776 668 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 CRTAMO95727 393 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 HADHAP40939 763 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 SLC7A9P82251 487 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 BTKQ06187 659 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 ANGPT1Q15389 498 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 ZNF77Q15935 545 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 KRT222Q8N1A0 295 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 PHC3Q8NDX5 983 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 SCG3Q8WXD2 468 aaKnown RBP7.26□□□□□ -1.25
MSH6-209ENST00000538136 NCSTNQ92542 709 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 ARHGEF2Q92974 986 aaKnown RBP7.26□□□□□ -1.25
MSH6-209ENST00000538136 ULK4Q96C45 1275 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 SPATA13Q96N96 652 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 NELL2Q99435 816 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 TMEM245Q9H330 911 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 PNPLA8Q9NP80 782 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 KLC4Q9NSK0 619 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 PCMTD2Q9NV79 361 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 SERGEFQ9UGK8 458 aa7.26□□□□□ -1.25
MSH6-209ENST00000538136 EDDM13A0A1B0GTR0 161 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 LILRB3O75022 631 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 KATNA1O75449 491 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 MT-ND3P03897 115 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 JUNDP17535 347 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 GMPRP36959 345 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 ARRB1P49407 418 aaPredicted RBP7.25□□□□□ -1.25
MSH6-209ENST00000538136 ILF3Q12906 894 aaKnown RBP eCLIP7.25□□□□□ -1.251e-6■■■□□ 16.2
MSH6-209ENST00000538136 CSHL1Q14406 222 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms