RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 IGLV3-25P01717 112 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 ATP6V1B1P15313 513 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 CORO1AP31146 461 aaKnown RBP8.73□□□□□ -1.01
UBE3B-208ENST00000538070 SLC6A4P31645 630 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 ADRA1AP35348 466 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 SGSHP51688 502 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 ZNF177Q13360 481 aaPredicted RBP8.73□□□□□ -1.01
UBE3B-208ENST00000538070 PTPRNQ16849 979 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 NADSYN1Q6IA69 706 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 KIAA0930Q6ICG6 404 aaPredicted RBP8.73□□□□□ -1.01
UBE3B-208ENST00000538070 IYDQ6PHW0 289 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 TMEM207Q6UWW9 146 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 TPGS1Q6ZTW0 290 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 CEP70Q8NHQ1 597 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 ATP6V1E2Q96A05 226 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 CNBD2Q96M20 576 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 SERPINI1Q99574 410 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 PRKD2Q9BZL6 878 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 EFCAB1Q9HAE3 211 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 SCUBE2Q9NQ36 999 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 RNF112Q9ULX5 631 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 AURKCQ9UQB9 309 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 TRAF6Q9Y4K3 522 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 E5RI56 91 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 BTN3A1O00481 513 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 NBNO60934 754 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 GUCA1CO95843 209 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 FAM163BP0C2L3 166 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 BMP1P13497 986 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 GJA1P17302 382 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 STX1BP61266 288 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 SEMA3AQ14563 771 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 TRIP4Q15650 581 aaPredicted RBP8.72□□□□□ -1.01
UBE3B-208ENST00000538070 RBBP7Q16576 425 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 MRNIPQ6NTE8 343 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 PAQR3Q6TCH7 311 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 KDM1BQ8NB78 822 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 FBXO22Q8NEZ5 403 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 TSPAN17Q96FV3 270 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 RPL10LQ96L21 214 aaKnown RBP8.72□□□□□ -1.01
UBE3B-208ENST00000538070 TTPALQ9BTX7 342 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 C1orf50Q9BV19 199 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 PIDD1Q9HB75 910 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 GPBP1L1Q9HC44 474 aaPredicted RBP8.72□□□□□ -1.01
UBE3B-208ENST00000538070 HMX1Q9NP08 348 aaPredicted RBP8.72□□□□□ -1.01
UBE3B-208ENST00000538070 IGSF5Q9NSI5 407 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 CATSPERZQ9NTU4 200 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 UBA2Q9UBT2 640 aaPredicted RBP8.72□□□□□ -1.01
UBE3B-208ENST00000538070 AFF4Q9UHB7 1163 aaKnown RBP8.72□□□□□ -1.01
UBE3B-208ENST00000538070 VPS28Q9UK41 221 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 APPL1Q9UKG1 709 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 SPO11Q9Y5K1 396 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 C2orf78A6NCI8 922 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 SLC38A8A6NNN8 435 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 FAM155AB1AL88 458 aaPredicted RBP8.72□□□□□ -1.01
UBE3B-208ENST00000538070 PSMD12O00232 456 aaPredicted RBP8.72□□□□□ -1.01
UBE3B-208ENST00000538070 OAZ2O95190 189 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 MBL2P11226 248 aaPredicted RBP8.72□□□□□ -1.01
UBE3B-208ENST00000538070 SLC11A2P49281 568 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 ZNF135P52742 658 aaPredicted RBP8.72□□□□□ -1.01
UBE3B-208ENST00000538070 MS4A2Q01362 244 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 SULT2A1Q06520 285 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 CAPRIN1Q14444 709 aaKnown RBP8.72□□□□□ -1.01
UBE3B-208ENST00000538070 SGO1Q5FBB7 561 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 LRRC73Q5JTD7 316 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 RAB44Q7Z6P3 723 aaPredicted RBP8.72□□□□□ -1.01
UBE3B-208ENST00000538070 AMIGO2Q86SJ2 522 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 ARHGAP18Q8N392 663 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 OR6Y1Q8NGX8 325 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 OR4L1Q8NH43 312 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 WBP2Q969T9 261 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 PTERQ96BW5 349 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 CDK15Q96Q40 435 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 TUBGCP5Q96RT8 1024 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 BATF3Q9NR55 127 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 TREX1Q9NSU2 369 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 EGFL7Q9UHF1 273 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 FCF1Q9Y324 198 aaKnown RBP8.72□□□□□ -1.01
UBE3B-208ENST00000538070 PCDHB9Q9Y5E1 797 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 GIPC1O14908 333 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 STX7O15400 261 aaKnown RBP8.72□□□□□ -1.01
UBE3B-208ENST00000538070 NIPSNAP2O75323 286 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 SMNDC1O75940 238 aaKnown RBP eCLIP8.72□□□□□ -1.01
UBE3B-208ENST00000538070 PGM3O95394 542 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 EOMESO95936 686 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 ETS2P15036 469 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 ACADSP16219 412 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 PIK3CGP48736 1102 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 GNA12Q03113 381 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 SERINC3Q13530 473 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 CEACAM7Q14002 265 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 TSNQ15631 228 aaKnown RBP8.72□□□□□ -1.01
UBE3B-208ENST00000538070 PLA2G4EQ3MJ16 856 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 MANEALQ5VSG8 457 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 C16orf89Q6UX73 402 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 FAM43BQ6ZT52 329 aaPredicted RBP8.72□□□□□ -1.01
UBE3B-208ENST00000538070 TMEM151AQ8N4L1 468 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 ST13P5Q8NFI4 369 aaPredicted RBP8.72□□□□□ -1.01
UBE3B-208ENST00000538070 GPR78Q96P69 363 aa8.72□□□□□ -1.01
UBE3B-208ENST00000538070 DEFB118Q96PH6 123 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms