RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 DNAJC1Q96KC8 554 aaKnown RBP15.7■□□□□ 0.1
SFSWAP-206ENST00000537582 MCCC1Q96RQ3 725 aaPredicted RBP15.7■□□□□ 0.1
SFSWAP-206ENST00000537582 RANBP9Q96S59 729 aa15.7■□□□□ 0.1
SFSWAP-206ENST00000537582 BPIFA1Q9NP55 256 aa15.7■□□□□ 0.1
SFSWAP-206ENST00000537582 SLC17A6Q9P2U8 582 aa15.7■□□□□ 0.1
SFSWAP-206ENST00000537582 DKK3Q9UBP4 350 aa15.7■□□□□ 0.1
SFSWAP-206ENST00000537582 MRPS17Q9Y2R5 130 aaKnown RBP15.7■□□□□ 0.1
SFSWAP-206ENST00000537582 PPIL1Q9Y3C6 166 aa15.7■□□□□ 0.1
SFSWAP-206ENST00000537582 C1orf232A0A0U1RR37 186 aa15.69■□□□□ 0.1
SFSWAP-206ENST00000537582 FAM237BA0A1B0GVD1 139 aa15.69■□□□□ 0.1
SFSWAP-206ENST00000537582 TCRBV9S1A1TA0A576 114 aa15.69■□□□□ 0.1
SFSWAP-206ENST00000537582 HEATR9A2RTY3 570 aa15.69■□□□□ 0.1
SFSWAP-206ENST00000537582 GOLGA8KD6RF30 607 aa15.69■□□□□ 0.1
SFSWAP-206ENST00000537582 C1QTNF3-AMACRE9PGA6 284 aa15.69■□□□□ 0.1
SFSWAP-206ENST00000537582 GOLGA8TH3BQL2 631 aa15.69■□□□□ 0.1
SFSWAP-206ENST00000537582 CLDN7O95471 211 aa15.69■□□□□ 0.1
SFSWAP-206ENST00000537582 ARNTP27540 789 aa15.69■□□□□ 0.1
SFSWAP-206ENST00000537582 P2RY2P41231 377 aa15.69■□□□□ 0.1
SFSWAP-206ENST00000537582 ZNF140P52738 457 aaPredicted RBP15.69■□□□□ 0.1
SFSWAP-206ENST00000537582 MUC3AQ02505 3323 aa15.69■□□□□ 0.1
SFSWAP-206ENST00000537582 LRRC32Q14392 662 aa15.69■□□□□ 0.1
SFSWAP-206ENST00000537582 E2F5Q15329 346 aa15.69■□□□□ 0.1
SFSWAP-206ENST00000537582 CNGA3Q16281 694 aa15.69■□□□□ 0.1
SFSWAP-206ENST00000537582 CRY1Q16526 586 aa15.69■□□□□ 0.1
SFSWAP-206ENST00000537582 TJAP1Q5JTD0 557 aa15.69■□□□□ 0.1
SFSWAP-206ENST00000537582 TSTD2Q5T7W7 516 aa15.69■□□□□ 0.1
SFSWAP-206ENST00000537582 ZNF776Q68DI1 518 aaPredicted RBP15.69■□□□□ 0.1
SFSWAP-206ENST00000537582 CEP128Q6ZU80 1094 aa15.69■□□□□ 0.1
SFSWAP-206ENST00000537582 USP45Q70EL2 814 aa15.69■□□□□ 0.1
SFSWAP-206ENST00000537582 TMEM135Q86UB9 458 aa15.69■□□□□ 0.1
SFSWAP-206ENST00000537582 TMPRSS6Q8IU80 811 aa15.69■□□□□ 0.1
SFSWAP-206ENST00000537582 PNPLA1Q8N8W4 532 aa15.69■□□□□ 0.1
SFSWAP-206ENST00000537582 PJA1Q8NG27 643 aa15.69■□□□□ 0.1
SFSWAP-206ENST00000537582 OR13J1Q8NGT2 312 aa15.69■□□□□ 0.1
SFSWAP-206ENST00000537582 FBF1Q8TES7 1133 aa15.69■□□□□ 0.1
SFSWAP-206ENST00000537582 MAGEE1Q9HCI5 957 aa15.69■□□□□ 0.1
SFSWAP-206ENST00000537582 TREX1Q9NSU2 369 aa15.69■□□□□ 0.1
SFSWAP-206ENST00000537582 A0A1W2PP55 124 aa15.68■□□□□ 0.1
SFSWAP-206ENST00000537582 TCRBV21S2A2A0A5A6 115 aa15.68■□□□□ 0.1
SFSWAP-206ENST00000537582 OR51F1A6NGY5 319 aa15.68■□□□□ 0.1
SFSWAP-206ENST00000537582 SASH3O75995 380 aa15.68■□□□□ 0.1
SFSWAP-206ENST00000537582 C1QAP02745 245 aa15.68■□□□□ 0.1
SFSWAP-206ENST00000537582 DCNP07585 359 aaKnown RBP15.68■□□□□ 0.1
SFSWAP-206ENST00000537582 ADRB3P13945 408 aa15.68■□□□□ 0.1
SFSWAP-206ENST00000537582 NDUFV2P19404 249 aa15.68■□□□□ 0.1
SFSWAP-206ENST00000537582 RALGDSQ12967 914 aa15.68■□□□□ 0.1
SFSWAP-206ENST00000537582 TAF1AQ15573 450 aaPredicted RBP15.68■□□□□ 0.1
SFSWAP-206ENST00000537582 PIP5KL1Q5T9C9 394 aa15.68■□□□□ 0.1
SFSWAP-206ENST00000537582 LRRC66Q68CR7 880 aa15.68■□□□□ 0.1
SFSWAP-206ENST00000537582 ERN2Q76MJ5 926 aaKnown RBP15.68■□□□□ 0.1
SFSWAP-206ENST00000537582 OR4K2Q8NGD2 314 aa15.68■□□□□ 0.1
SFSWAP-206ENST00000537582 MRGPRX1Q96LB2 322 aa15.68■□□□□ 0.1
SFSWAP-206ENST00000537582 FUT8Q9BYC5 575 aa15.68■□□□□ 0.1
SFSWAP-206ENST00000537582 SUDS3Q9H7L9 328 aaPredicted RBP15.68■□□□□ 0.1
SFSWAP-206ENST00000537582 SMYD2Q9NRG4 433 aa15.68■□□□□ 0.1
SFSWAP-206ENST00000537582 FNDC3AQ9Y2H6 1198 aaKnown RBP15.68■□□□□ 0.1
SFSWAP-206ENST00000537582 CXorf49A8MYA2 514 aaPredicted RBP15.67■□□□□ 0.1
SFSWAP-206ENST00000537582 CHURC1-FNTBB4DL54 471 aa15.67■□□□□ 0.1
SFSWAP-206ENST00000537582 RNASEH1O60930 286 aaKnown RBP15.67■□□□□ 0.1
SFSWAP-206ENST00000537582 USP1O94782 785 aa15.67■□□□□ 0.1
SFSWAP-206ENST00000537582 POLBP06746 335 aa15.67■□□□□ 0.1
SFSWAP-206ENST00000537582 ERVK-10P10266 1014 aa15.67■□□□□ 0.1
SFSWAP-206ENST00000537582 GABRG2P18507 467 aa15.67■□□□□ 0.1
SFSWAP-206ENST00000537582 XPAP23025 273 aaPredicted RBP15.67■□□□□ 0.1
SFSWAP-206ENST00000537582 MMP12P39900 470 aa15.67■□□□□ 0.1
SFSWAP-206ENST00000537582 HSF5Q4G112 596 aaPredicted RBP15.67■□□□□ 0.1
SFSWAP-206ENST00000537582 TMEM31Q5JXX7 168 aa15.67■□□□□ 0.1
SFSWAP-206ENST00000537582 AGBL4Q5VU57 503 aa15.67■□□□□ 0.1
SFSWAP-206ENST00000537582 FBXL19Q6PCT2 694 aa15.67■□□□□ 0.1
SFSWAP-206ENST00000537582 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.67■□□□□ 0.1
SFSWAP-206ENST00000537582 HDDC3Q8N4P3 179 aa15.67■□□□□ 0.1
SFSWAP-206ENST00000537582 GSDMBQ8TAX9 411 aa15.67■□□□□ 0.1
SFSWAP-206ENST00000537582 HMGB4Q8WW32 186 aa15.67■□□□□ 0.1
SFSWAP-206ENST00000537582 PPP1R16AQ96I34 528 aa15.67■□□□□ 0.1
SFSWAP-206ENST00000537582 TTC25Q96NG3 672 aa15.67■□□□□ 0.1
SFSWAP-206ENST00000537582 HHIPQ96QV1 700 aa15.67■□□□□ 0.1
SFSWAP-206ENST00000537582 LYSMD1Q96S90 227 aa15.67■□□□□ 0.1
SFSWAP-206ENST00000537582 UHRF1Q96T88 793 aaPredicted RBP15.67■□□□□ 0.1
SFSWAP-206ENST00000537582 WRAP53Q9BUR4 548 aaKnown RBP15.67■□□□□ 0.1
SFSWAP-206ENST00000537582 GPR63Q9BZJ6 419 aa15.67■□□□□ 0.1
SFSWAP-206ENST00000537582 MRM3Q9HC36 420 aaKnown RBP15.67■□□□□ 0.1
SFSWAP-206ENST00000537582 DYRK4Q9NR20 520 aa15.67■□□□□ 0.1
SFSWAP-206ENST00000537582 PLAAQ9Y263 795 aa15.67■□□□□ 0.1
SFSWAP-206ENST00000537582 A0A1W2PQ67 120 aa15.66■□□□□ 0.1
SFSWAP-206ENST00000537582 MAGEB16A2A368 324 aa15.66■□□□□ 0.1
SFSWAP-206ENST00000537582 RNASEH2AO75792 299 aaKnown RBP15.66■□□□□ 0.1
SFSWAP-206ENST00000537582 VAPBO95292 243 aa15.66■□□□□ 0.1
SFSWAP-206ENST00000537582 CRTAMO95727 393 aa15.66■□□□□ 0.1
SFSWAP-206ENST00000537582 ADH1BP00325 375 aa15.66■□□□□ 0.1
SFSWAP-206ENST00000537582 C1SP09871 688 aa15.66■□□□□ 0.1
SFSWAP-206ENST00000537582 PRSS56P0CW18 603 aa15.66■□□□□ 0.1
SFSWAP-206ENST00000537582 C5AR1P21730 350 aa15.66■□□□□ 0.1
SFSWAP-206ENST00000537582 VIPR1P32241 457 aa15.66■□□□□ 0.1
SFSWAP-206ENST00000537582 NEK3P51956 506 aa15.66■□□□□ 0.1
SFSWAP-206ENST00000537582 TAS2R38P59533 333 aa15.66■□□□□ 0.1
SFSWAP-206ENST00000537582 POLR2LP62875 67 aaKnown RBP15.66■□□□□ 0.1
SFSWAP-206ENST00000537582 PTSQ03393 145 aa15.66■□□□□ 0.1
SFSWAP-206ENST00000537582 SPANXN3Q5MJ09 141 aa15.66■□□□□ 0.1
SFSWAP-206ENST00000537582 FAM46CQ5VWP2 391 aa15.66■□□□□ 0.1
SFSWAP-206ENST00000537582 CWF19L1Q69YN2 538 aaKnown RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms