RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 ACOX1Q15067 660 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 PARP15Q460N3 678 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 ZNF484Q5JVG2 852 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 COLEC12Q5KU26 742 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 C12orf60Q5U649 245 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 LIX1LQ8IVB5 337 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 FAM178BQ8IXR5 827 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 MICU2Q8IYU8 434 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 EID3Q8N140 333 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 OR7D4Q8NG98 312 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 FEZF2Q8TBJ5 459 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 DEDD2Q8WXF8 326 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 MARC2Q969Z3 335 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 TESCQ96BS2 214 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 TNIP3Q96KP6 325 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 UCK2Q9BZX2 261 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 ROGDIQ9GZN7 287 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 CPVLQ9H3G5 476 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 POLR3BQ9NW08 1133 aaPredicted RBP8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 GABBR1Q9UBS5 961 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 FAM8A1Q9UBU6 413 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 RAP2CQ9Y3L5 183 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 A3GALT2U3KPV4 340 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 CAMTA1Q9Y6Y1 1673 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 TCP10L2B9ZVM9 353 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 F8W810 466 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 TPST1O60507 370 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 RBP1P09455 135 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 GTF2E2P29084 291 aaKnown RBP8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 SHMT1P34896 483 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 HTR7P34969 479 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 RPS5P46782 204 aaKnown RBP8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 RPL14P50914 215 aaKnown RBP8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 LSM3P62310 102 aaKnown RBP8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 DBPQ10586 325 aaPredicted RBP8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 TRAF3Q13114 568 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 GPR50Q13585 617 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 GPAT3Q53EU6 434 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 TTC23Q5W5X9 447 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 PPP1R18Q6NYC8 613 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 ZNF720Q7Z2F6 126 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 PRSS42Q7Z5A4 293 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 FAM83FQ8NEG4 500 aaPredicted RBP8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 TRPV3Q8NET8 790 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 BLOC1S5Q8TDH9 187 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 HDAC10Q969S8 669 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 FAF2Q96CS3 445 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 ZHX1-C8orf76Q96EF9 292 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 NT5C1BQ96P26 610 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 IKZF4Q9H2S9 585 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 POPDC2Q9HBU9 364 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 CYP26B1Q9NR63 512 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 SMYD2Q9NRG4 433 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 FBXL12Q9NXK8 326 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 PCDH10Q9P2E7 1040 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 CSNK1G3Q9Y6M4 447 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 ARAP2Q8WZ64 1704 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 TOGARAM1Q9Y4F4 1720 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 LINC00862A6NCI5 91 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 WDR64B1ANS9 1081 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 STX7O15400 261 aaKnown RBP8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 INMTO95050 263 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 GPIP06744 558 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 F8A1P23610 371 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 AXLP30530 894 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 NPY2RP49146 381 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 YWHAZP63104 245 aaKnown RBP8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 ZNF267Q14586 743 aaPredicted RBP8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 KCNJ11Q14654 390 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 DDR2Q16832 855 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 ALFQ53S48 1182 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 GLRA4Q5JXX5 417 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 PIK3R6Q5UE93 754 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 PM20D1Q6GTS8 502 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 MON1BQ7L1V2 547 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 ENOSF1Q7L5Y1 443 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 FAM83AQ86UY5 434 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 CMTR2Q8IYT2 770 aaKnown RBP8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 LRRC47Q8N1G4 583 aaKnown RBP8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 KIAA1958Q8N8K9 716 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 SETD6Q8TBK2 473 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 KLHL6Q8WZ60 621 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 TMCO6Q96DC7 493 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 BDH2Q9BUT1 245 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 SLC6A17Q9H1V8 727 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 OR51B5Q9H339 312 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 CACNA2D2Q9NY47 1150 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 TMEM181Q9P2C4 612 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 OSGIN1Q9UJX0 560 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 BCS1LQ9Y276 419 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 STON1Q9Y6Q2 735 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 KCNU1A8MYU2 1149 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 TRIM13O60858 407 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 FGF18O76093 207 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 SRP72O76094 671 aaKnown RBP8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 VNN1O95497 513 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 CYP2A6P11509 494 aaPredicted RBP8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 DDCP20711 480 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms