RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 TBATAQ96M53 351 aa13.61□□□□□ -0.23
SMG6-203ENST00000536871 TMCO1Q9UM00 188 aa13.61□□□□□ -0.23
SMG6-203ENST00000536871 ARHGAP26Q9UNA1 814 aa13.61□□□□□ -0.23
SMG6-203ENST00000536871 PLA2G4CQ9UP65 541 aa13.61□□□□□ -0.23
SMG6-203ENST00000536871 GOLGA8CPA6NN73 597 aa13.6□□□□□ -0.23
SMG6-203ENST00000536871 C1RP00736 705 aa13.6□□□□□ -0.23
SMG6-203ENST00000536871 TPBGLP0DKB5 382 aa13.6□□□□□ -0.23
SMG6-203ENST00000536871 LPOP22079 712 aaPredicted RBP13.6□□□□□ -0.23
SMG6-203ENST00000536871 SCNN1BP51168 640 aa13.6□□□□□ -0.23
SMG6-203ENST00000536871 ARSDP51689 593 aa13.6□□□□□ -0.23
SMG6-203ENST00000536871 ZNF140P52738 457 aaPredicted RBP13.6□□□□□ -0.23
SMG6-203ENST00000536871 RPL26P61254 145 aaKnown RBP13.6□□□□□ -0.23
SMG6-203ENST00000536871 AP1S1P61966 158 aa13.6□□□□□ -0.23
SMG6-203ENST00000536871 SMAD3P84022 425 aaKnown RBP13.6□□□□□ -0.23
SMG6-203ENST00000536871 DLG1Q12959 904 aa13.6□□□□□ -0.23
SMG6-203ENST00000536871 USP4Q13107 963 aa13.6□□□□□ -0.23
SMG6-203ENST00000536871 UBAP2LQ14157 1087 aaKnown RBP13.6□□□□□ -0.23
SMG6-203ENST00000536871 IHHQ14623 411 aa13.6□□□□□ -0.23
SMG6-203ENST00000536871 NAA25Q14CX7 972 aa13.6□□□□□ -0.23
SMG6-203ENST00000536871 MPP7Q5T2T1 576 aa13.6□□□□□ -0.23
SMG6-203ENST00000536871 RBM20Q5T481 1227 aaKnown RBP13.6□□□□□ -0.23
SMG6-203ENST00000536871 RNF219Q5W0B1 726 aaPredicted RBP13.6□□□□□ -0.23
SMG6-203ENST00000536871 GLT6D1Q7Z4J2 308 aa13.6□□□□□ -0.23
SMG6-203ENST00000536871 RAB44Q7Z6P3 723 aaPredicted RBP13.6□□□□□ -0.23
SMG6-203ENST00000536871 APLFQ8IW19 511 aaPredicted RBP13.6□□□□□ -0.23
SMG6-203ENST00000536871 FAM217AQ8IXS0 508 aa13.6□□□□□ -0.23
SMG6-203ENST00000536871 DCAF4L2Q8NA75 395 aa13.6□□□□□ -0.23
SMG6-203ENST00000536871 DNAJC1Q96KC8 554 aaKnown RBP13.6□□□□□ -0.23
SMG6-203ENST00000536871 OLFM1Q99784 485 aa13.6□□□□□ -0.23
SMG6-203ENST00000536871 RTKNQ9BST9 563 aa13.6□□□□□ -0.23
SMG6-203ENST00000536871 POMKQ9H5K3 350 aa13.6□□□□□ -0.23
SMG6-203ENST00000536871 C15orf41Q9Y2V0 281 aa13.6□□□□□ -0.23
SMG6-203ENST00000536871 MICAL3Q7RTP6 2002 aa13.6□□□□□ -0.23
SMG6-203ENST00000536871 CCDC162PA2VCL2 907 aa13.59□□□□□ -0.23
SMG6-203ENST00000536871 H0Y626 953 aa13.59□□□□□ -0.23
SMG6-203ENST00000536871 CBX4O00257 560 aa13.59□□□□□ -0.23
SMG6-203ENST00000536871 LUC7L3O95232 432 aaKnown RBP13.59□□□□□ -0.23
SMG6-203ENST00000536871 PYGLP06737 847 aa13.59□□□□□ -0.23
SMG6-203ENST00000536871 IMPDH1P20839 514 aa13.59□□□□□ -0.23
SMG6-203ENST00000536871 PPARGP37231 505 aaPredicted RBP13.59□□□□□ -0.23
SMG6-203ENST00000536871 TTPAP49638 278 aa13.59□□□□□ -0.23
SMG6-203ENST00000536871 ATP6V0D1P61421 351 aa13.59□□□□□ -0.23
SMG6-203ENST00000536871 GALNT3Q14435 633 aa13.59□□□□□ -0.23
SMG6-203ENST00000536871 E2F5Q15329 346 aa13.59□□□□□ -0.23
SMG6-203ENST00000536871 CYTH1Q15438 398 aa13.59□□□□□ -0.23
SMG6-203ENST00000536871 CXorf57Q6NSI4 855 aaKnown RBP13.59□□□□□ -0.23
SMG6-203ENST00000536871 RETSATQ6NUM9 610 aa13.59□□□□□ -0.23
SMG6-203ENST00000536871 CCDC149Q6ZUS6 474 aa13.59□□□□□ -0.23
SMG6-203ENST00000536871 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.59□□□□□ -0.23
SMG6-203ENST00000536871 CPXM2Q8N436 756 aa13.59□□□□□ -0.23
SMG6-203ENST00000536871 CCNYL1Q8N7R7 359 aa13.59□□□□□ -0.23
SMG6-203ENST00000536871 RP9Q8TA86 221 aaKnown RBP13.59□□□□□ -0.23
SMG6-203ENST00000536871 ZNF483Q8TF39 744 aaPredicted RBP13.59□□□□□ -0.23
SMG6-203ENST00000536871 MRPS31Q92665 395 aaKnown RBP13.59□□□□□ -0.23
SMG6-203ENST00000536871 ACDQ96AP0 544 aa13.59□□□□□ -0.23
SMG6-203ENST00000536871 L3HYPDHQ96EM0 354 aa13.59□□□□□ -0.23
SMG6-203ENST00000536871 TMA16Q96EY4 203 aaKnown RBP13.59□□□□□ -0.23
SMG6-203ENST00000536871 AARSD1Q9BTE6 412 aaKnown RBP13.59□□□□□ -0.23
SMG6-203ENST00000536871 C2orf49Q9BVC5 232 aaPredicted RBP13.59□□□□□ -0.23
SMG6-203ENST00000536871 TFB2MQ9H5Q4 396 aaKnown RBP13.59□□□□□ -0.23
SMG6-203ENST00000536871 ATP11BQ9Y2G3 1177 aa13.59□□□□□ -0.23
SMG6-203ENST00000536871 RAI2Q9Y5P3 530 aa13.59□□□□□ -0.23
SMG6-203ENST00000536871 MRPL42Q9Y6G3 142 aaKnown RBP13.59□□□□□ -0.23
SMG6-203ENST00000536871 RGSL1A5PLK6 1076 aa13.59□□□□□ -0.23
SMG6-203ENST00000536871 H7C0S8 307 aa13.59□□□□□ -0.23
SMG6-203ENST00000536871 F11P03951 625 aa13.59□□□□□ -0.23
SMG6-203ENST00000536871 PAX7P23759 505 aa13.59□□□□□ -0.23
SMG6-203ENST00000536871 MPSTP25325 297 aa13.59□□□□□ -0.23
SMG6-203ENST00000536871 GMPRP36959 345 aa13.59□□□□□ -0.23
SMG6-203ENST00000536871 MNX1P50219 401 aaPredicted RBP13.59□□□□□ -0.23
SMG6-203ENST00000536871 KLF10Q13118 480 aa13.59□□□□□ -0.23
SMG6-203ENST00000536871 ZNF460Q14592 562 aa13.59□□□□□ -0.23
SMG6-203ENST00000536871 RTL10Q7L3V2 364 aa13.59□□□□□ -0.23
SMG6-203ENST00000536871 HOMEZQ8IX15 550 aa13.59□□□□□ -0.23
SMG6-203ENST00000536871 STK40Q8N2I9 435 aa13.59□□□□□ -0.23
SMG6-203ENST00000536871 TXNDC5Q8NBS9 432 aaKnown RBP13.59□□□□□ -0.23
SMG6-203ENST00000536871 CEP70Q8NHQ1 597 aa13.59□□□□□ -0.23
SMG6-203ENST00000536871 JADE3Q92613 823 aa13.59□□□□□ -0.23
SMG6-203ENST00000536871 MAELQ96JY0 434 aaKnown RBP13.59□□□□□ -0.23
SMG6-203ENST00000536871 FAM161BQ96MY7 647 aa13.59□□□□□ -0.23
SMG6-203ENST00000536871 NDNQ99608 321 aa13.59□□□□□ -0.23
SMG6-203ENST00000536871 RNF38Q9H0F5 515 aa13.59□□□□□ -0.23
SMG6-203ENST00000536871 GKN1Q9NS71 199 aa13.59□□□□□ -0.23
SMG6-203ENST00000536871 TAS2R13Q9NYV9 303 aa13.59□□□□□ -0.23
SMG6-203ENST00000536871 L3MBTL1Q9Y468 752 aa13.59□□□□□ -0.23
SMG6-203ENST00000536871 ARL5AQ9Y689 179 aa13.59□□□□□ -0.23
SMG6-203ENST00000536871 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.58□□□□□ -0.24
SMG6-203ENST00000536871 A8MT66 165 aa13.58□□□□□ -0.24
SMG6-203ENST00000536871 ANKRD66B4E2M5 251 aa13.58□□□□□ -0.24
SMG6-203ENST00000536871 GFRA2O00451 464 aa13.58□□□□□ -0.24
SMG6-203ENST00000536871 GRID2O43424 1007 aa13.58□□□□□ -0.24
SMG6-203ENST00000536871 FKBP6O75344 327 aa13.58□□□□□ -0.24
SMG6-203ENST00000536871 NDUFS3O75489 264 aa13.58□□□□□ -0.24
SMG6-203ENST00000536871 TMCC1O94876 653 aa13.58□□□□□ -0.24
SMG6-203ENST00000536871 TIMP1P01033 207 aa13.58□□□□□ -0.24
SMG6-203ENST00000536871 CHRNGP07510 517 aa13.58□□□□□ -0.24
SMG6-203ENST00000536871 CPOXP36551 454 aa13.58□□□□□ -0.24
SMG6-203ENST00000536871 CSNK1DP48730 415 aa13.58□□□□□ -0.24
SMG6-203ENST00000536871 CLCN4P51793 760 aa13.58□□□□□ -0.24
SMG6-203ENST00000536871 ADARP55265 1226 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms