RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 RALGPS1Q5JS13 557 aa17.94■□□□□ 0.46
TNFRSF1A-209ENST00000536717 DPPA4Q7L190 304 aa17.94■□□□□ 0.46
TNFRSF1A-209ENST00000536717 MARCH9Q86YJ5 346 aa17.94■□□□□ 0.46
TNFRSF1A-209ENST00000536717 KATNAL2Q8IYT4 538 aa17.94■□□□□ 0.46
TNFRSF1A-209ENST00000536717 ZNF548Q8NEK5 533 aaPredicted RBP17.94■□□□□ 0.46
TNFRSF1A-209ENST00000536717 LRRN4Q8WUT4 740 aa17.94■□□□□ 0.46
TNFRSF1A-209ENST00000536717 MAML1Q92585 1016 aa17.94■□□□□ 0.46
TNFRSF1A-209ENST00000536717 KRT35Q92764 455 aa17.94■□□□□ 0.46
TNFRSF1A-209ENST00000536717 RNF157Q96PX1 679 aa17.94■□□□□ 0.46
TNFRSF1A-209ENST00000536717 TCEAL2Q9H3H9 227 aaPredicted RBP17.94■□□□□ 0.46
TNFRSF1A-209ENST00000536717 NT5MQ9NPB1 228 aa17.94■□□□□ 0.46
TNFRSF1A-209ENST00000536717 KCND1Q9NSA2 647 aa17.94■□□□□ 0.46
TNFRSF1A-209ENST00000536717 ANKRD11Q6UB99 2663 aaPredicted RBP17.94■□□□□ 0.46
TNFRSF1A-209ENST00000536717 C3orf70A6NLC5 250 aaPredicted RBP17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 TOR1BO14657 336 aa17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 SCAMP1O15126 338 aa17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 LZTS3O60299 673 aaPredicted RBP17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 ZRANB2O95218 330 aaKnown RBP eCLIP17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 C1SP09871 688 aa17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 JUNDP17535 347 aa17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 ACP1P24666 158 aa17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 MACC1Q6ZN28 852 aa17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 VSIG1Q86XK7 387 aa17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 RBFAQ8N0V3 343 aa17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 GALNT15Q8N3T1 639 aa17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 PAF1Q8N7H5 531 aa17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 PLD5Q8N7P1 536 aa17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 PDCD6IPQ8WUM4 868 aaKnown RBP17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 TSGA13Q96PP4 275 aa17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 NLGN3Q9NZ94 848 aa17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 DTLQ9NZJ0 730 aa17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 B4GALT6Q9UBX8 382 aa17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 PACSIN2Q9UNF0 486 aaPredicted RBP17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 A0A1W2PQ67 120 aa17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 FAM149AA5PLN7 773 aa17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 TMEM8BA6NDV4 472 aa17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 NEMP2A6NFY4 417 aa17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 A8MX80 341 aa17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 ZNF487B1APH4 448 aa17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 H3BM21 787 aa17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 K7ESM1 405 aa17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 MATN3O15232 486 aa17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 RECQL5O94762 991 aaPredicted RBP17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 CAPNS1P04632 268 aa17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 ELFN1P0C7U0 828 aa17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 CCNCP24863 283 aa17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 MARCKSL1P49006 195 aa17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 CLDN6P56747 220 aa17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 RWDD2BP57060 319 aa17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 IHHQ14623 411 aa17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 ZNF569Q5MCW4 686 aa17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 ALG1LQ6GMV1 187 aa17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 TIGD7Q6NT04 549 aaPredicted RBP17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 RCOR2Q8IZ40 523 aa17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 EXD1Q8NHP7 514 aa17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 FATE1Q969F0 183 aa17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 HDAC11Q96DB2 347 aa17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 HES6Q96HZ4 224 aa17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 RBM41Q96IZ5 413 aaKnown RBP17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 SEMA3CQ99985 751 aa17.93■□□□□ 0.46
TNFRSF1A-209ENST00000536717 ZFC3H1O60293 1989 aaKnown RBP17.92■□□□□ 0.46
TNFRSF1A-209ENST00000536717 LY6G6EA0A0G2JKS1 128 aa17.92■□□□□ 0.46
TNFRSF1A-209ENST00000536717 PGLSO95336 258 aa17.92■□□□□ 0.46
TNFRSF1A-209ENST00000536717 CPP00450 1065 aa17.92■□□□□ 0.46
TNFRSF1A-209ENST00000536717 PEX5P50542 639 aa17.92■□□□□ 0.46
TNFRSF1A-209ENST00000536717 INPP5AQ14642 412 aa17.92■□□□□ 0.46
TNFRSF1A-209ENST00000536717 RPS6KA1Q15418 735 aa17.92■□□□□ 0.46
TNFRSF1A-209ENST00000536717 MEI1Q5TIA1 1274 aa17.92■□□□□ 0.46
TNFRSF1A-209ENST00000536717 CCDC50Q8IVM0 306 aa17.92■□□□□ 0.46
TNFRSF1A-209ENST00000536717 PHACTR4Q8IZ21 702 aa17.92■□□□□ 0.46
TNFRSF1A-209ENST00000536717 PLA2G15Q8NCC3 412 aa17.92■□□□□ 0.46
TNFRSF1A-209ENST00000536717 RNF25Q96BH1 459 aaPredicted RBP17.92■□□□□ 0.46
TNFRSF1A-209ENST00000536717 APOLD1Q96LR9 279 aa17.92■□□□□ 0.46
TNFRSF1A-209ENST00000536717 APOOQ9BUR5 198 aa17.92■□□□□ 0.46
TNFRSF1A-209ENST00000536717 MAK16Q9BXY0 300 aaKnown RBP17.92■□□□□ 0.46
TNFRSF1A-209ENST00000536717 POLR1EQ9GZS1 481 aaKnown RBP17.92■□□□□ 0.46
TNFRSF1A-209ENST00000536717 APOBEC3BQ9UH17 382 aaKnown RBP17.92■□□□□ 0.46
TNFRSF1A-209ENST00000536717 ZMIZ1Q9ULJ6 1067 aa17.92■□□□□ 0.46
TNFRSF1A-209ENST00000536717 PHTF1Q9UMS5 762 aa17.92■□□□□ 0.46
TNFRSF1A-209ENST00000536717 ZKSCAN5Q9Y2L8 839 aa17.92■□□□□ 0.46
TNFRSF1A-209ENST00000536717 CSNK1G3Q9Y6M4 447 aa17.92■□□□□ 0.46
TNFRSF1A-209ENST00000536717 U3KQA8 63 aa17.92■□□□□ 0.46
TNFRSF1A-209ENST00000536717 COL27A1Q8IZC6 1860 aaPredicted RBP17.91■□□□□ 0.46
TNFRSF1A-209ENST00000536717 AQP9O43315 295 aa17.91■□□□□ 0.46
TNFRSF1A-209ENST00000536717 URB1O60287 2271 aaKnown RBP17.91■□□□□ 0.46
TNFRSF1A-209ENST00000536717 PCCBP05166 539 aa17.91■□□□□ 0.46
TNFRSF1A-209ENST00000536717 ALPPL2P10696 532 aa17.91■□□□□ 0.46
TNFRSF1A-209ENST00000536717 CDK4P11802 303 aa17.91■□□□□ 0.46
TNFRSF1A-209ENST00000536717 MX2P20592 715 aa17.91■□□□□ 0.46
TNFRSF1A-209ENST00000536717 CETN2P41208 172 aa17.91■□□□□ 0.46
TNFRSF1A-209ENST00000536717 ILKQ13418 452 aa17.91■□□□□ 0.46
TNFRSF1A-209ENST00000536717 MTM1Q13496 603 aa17.91■□□□□ 0.46
TNFRSF1A-209ENST00000536717 CAMK2BQ13554 666 aa17.91■□□□□ 0.46
TNFRSF1A-209ENST00000536717 CNGA3Q16281 694 aa17.91■□□□□ 0.46
TNFRSF1A-209ENST00000536717 SLC9A4Q6AI14 798 aa17.91■□□□□ 0.46
TNFRSF1A-209ENST00000536717 NYAP1Q6ZVC0 841 aa17.91■□□□□ 0.46
TNFRSF1A-209ENST00000536717 TMPRSS12Q86WS5 348 aa17.91■□□□□ 0.46
TNFRSF1A-209ENST00000536717 FAM181AQ8N9Y4 354 aa17.91■□□□□ 0.46
TNFRSF1A-209ENST00000536717 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.91■□□□□ 0.46
TNFRSF1A-209ENST00000536717 BTN2A2Q8WVV5 523 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms