RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 HSD11B1LQ7Z5J1 315 aa13.2□□□□□ -0.3
PRKDC-206ENST00000536429 RAB44Q7Z6P3 723 aaPredicted RBP13.2□□□□□ -0.3
PRKDC-206ENST00000536429 MARCH9Q86YJ5 346 aa13.2□□□□□ -0.3
PRKDC-206ENST00000536429 DCP2Q8IU60 420 aaKnown RBP13.2□□□□□ -0.3
PRKDC-206ENST00000536429 CCDC50Q8IVM0 306 aa13.2□□□□□ -0.3
PRKDC-206ENST00000536429 RCOR2Q8IZ40 523 aa13.2□□□□□ -0.3
PRKDC-206ENST00000536429 CBARPQ8N350 705 aaPredicted RBP13.2□□□□□ -0.3
PRKDC-206ENST00000536429 EXD1Q8NHP7 514 aa13.2□□□□□ -0.3
PRKDC-206ENST00000536429 ALG3Q92685 438 aa13.2□□□□□ -0.3
PRKDC-206ENST00000536429 SCRN2Q96FV2 425 aa13.2□□□□□ -0.3
PRKDC-206ENST00000536429 CNDP2Q96KP4 475 aaKnown RBP13.2□□□□□ -0.3
PRKDC-206ENST00000536429 COQ10AQ96MF6 247 aa13.2□□□□□ -0.3
PRKDC-206ENST00000536429 CNTNAP3BQ96NU0 1288 aa13.2□□□□□ -0.3
PRKDC-206ENST00000536429 AGAP3Q96P47 875 aa13.2□□□□□ -0.3
PRKDC-206ENST00000536429 MCCC1Q96RQ3 725 aaPredicted RBP13.2□□□□□ -0.3
PRKDC-206ENST00000536429 ANP32EQ9BTT0 268 aa13.2□□□□□ -0.3
PRKDC-206ENST00000536429 SCNM1Q9BWG6 230 aa13.2□□□□□ -0.3
PRKDC-206ENST00000536429 C1QTNF7Q9BXJ2 289 aa13.2□□□□□ -0.3
PRKDC-206ENST00000536429 CNTNAP3Q9BZ76 1288 aa13.2□□□□□ -0.3
PRKDC-206ENST00000536429 BRD8Q9H0E9 1235 aa13.2□□□□□ -0.3
PRKDC-206ENST00000536429 C10orf88Q9H8K7 445 aa13.2□□□□□ -0.3
PRKDC-206ENST00000536429 FTSJ1Q9UET6 329 aa13.2□□□□□ -0.3
PRKDC-206ENST00000536429 AMACRQ9UHK6 382 aa13.2□□□□□ -0.3
PRKDC-206ENST00000536429 PPIL1Q9Y3C6 166 aa13.2□□□□□ -0.3
PRKDC-206ENST00000536429 PCDHA3Q9Y5H8 950 aa13.2□□□□□ -0.3
PRKDC-206ENST00000536429 FREM2Q5SZK8 3169 aa13.2□□□□□ -0.3
PRKDC-206ENST00000536429 A0A1W2PQ67 120 aa13.19□□□□□ -0.3
PRKDC-206ENST00000536429 CFAP69A5D8W1 941 aa13.19□□□□□ -0.3
PRKDC-206ENST00000536429 ENC1O14682 589 aa13.19□□□□□ -0.3
PRKDC-206ENST00000536429 PPP1R12AO14974 1030 aaPredicted RBP13.19□□□□□ -0.3
PRKDC-206ENST00000536429 SCAMP1O15126 338 aa13.19□□□□□ -0.3
PRKDC-206ENST00000536429 SIGLEC6O43699 453 aa13.19□□□□□ -0.3
PRKDC-206ENST00000536429 DKK1O94907 266 aa13.19□□□□□ -0.3
PRKDC-206ENST00000536429 LDOC1O95751 146 aaPredicted RBP13.19□□□□□ -0.3
PRKDC-206ENST00000536429 CELA2BP08218 269 aaPredicted RBP13.19□□□□□ -0.3
PRKDC-206ENST00000536429 JUNDP17535 347 aa13.19□□□□□ -0.3
PRKDC-206ENST00000536429 PTPN3P26045 913 aa13.19□□□□□ -0.3
PRKDC-206ENST00000536429 CTNNA2P26232 953 aa13.19□□□□□ -0.3
PRKDC-206ENST00000536429 ETV3P41162 512 aa13.19□□□□□ -0.3
PRKDC-206ENST00000536429 CLDN6P56747 220 aa13.19□□□□□ -0.3
PRKDC-206ENST00000536429 TFDP2Q14188 446 aa13.19□□□□□ -0.3
PRKDC-206ENST00000536429 TCEA2Q15560 299 aa13.19□□□□□ -0.3
PRKDC-206ENST00000536429 INAVAQ3KP66 663 aa13.19□□□□□ -0.3
PRKDC-206ENST00000536429 CRTC1Q6UUV9 634 aa13.19□□□□□ -0.3
PRKDC-206ENST00000536429 NT5DC3Q86UY8 548 aa13.19□□□□□ -0.3
PRKDC-206ENST00000536429 ZNF548Q8NEK5 533 aaPredicted RBP13.19□□□□□ -0.3
PRKDC-206ENST00000536429 KIAA1524Q8TCG1 905 aa13.19□□□□□ -0.3
PRKDC-206ENST00000536429 ADAMTS14Q8WXS8 1223 aa13.19□□□□□ -0.3
PRKDC-206ENST00000536429 IFT43Q96FT9 208 aa13.19□□□□□ -0.3
PRKDC-206ENST00000536429 RBM41Q96IZ5 413 aaKnown RBP13.19□□□□□ -0.3
PRKDC-206ENST00000536429 RBM15Q96T37 977 aaKnown RBP eCLIP13.19□□□□□ -0.3
PRKDC-206ENST00000536429 APOOQ9BUR5 198 aa13.19□□□□□ -0.3
PRKDC-206ENST00000536429 PACSIN2Q9UNF0 486 aaPredicted RBP13.19□□□□□ -0.3
PRKDC-206ENST00000536429 TP53BP1Q12888 1972 aaPredicted RBP13.19□□□□□ -0.3
PRKDC-206ENST00000536429 A0A0J9YYE9 177 aa13.18□□□□□ -0.3
PRKDC-206ENST00000536429 F5H423 210 aaPredicted RBP13.18□□□□□ -0.3
PRKDC-206ENST00000536429 GCATO75600 419 aa13.18□□□□□ -0.3
PRKDC-206ENST00000536429 FTCDO95954 541 aa13.18□□□□□ -0.3
PRKDC-206ENST00000536429 TRBC1P01850 177 aa13.18□□□□□ -0.3
PRKDC-206ENST00000536429 PYGMP11217 842 aa13.18□□□□□ -0.3
PRKDC-206ENST00000536429 TGM2P21980 687 aa13.18□□□□□ -0.3
PRKDC-206ENST00000536429 CD68P34810 354 aaPredicted RBP13.18□□□□□ -0.3
PRKDC-206ENST00000536429 NR2C2P49116 596 aa13.18□□□□□ -0.3
PRKDC-206ENST00000536429 THOP1P52888 689 aa13.18□□□□□ -0.3
PRKDC-206ENST00000536429 HNRNPKP61978 463 aaKnown RBP eCLIP13.18□□□□□ -0.3
PRKDC-206ENST00000536429 YPEL5P62699 121 aa13.18□□□□□ -0.3
PRKDC-206ENST00000536429 WASHC5Q12768 1159 aa13.18□□□□□ -0.3
PRKDC-206ENST00000536429 C1orf61Q13536 156 aa13.18□□□□□ -0.3
PRKDC-206ENST00000536429 NFATC4Q14934 902 aa13.18□□□□□ -0.3
PRKDC-206ENST00000536429 PPP2R5EQ16537 467 aa13.18□□□□□ -0.3
PRKDC-206ENST00000536429 QPCTQ16769 361 aa13.18□□□□□ -0.3
PRKDC-206ENST00000536429 PROX2Q3B8N5 592 aa13.18□□□□□ -0.3
PRKDC-206ENST00000536429 LRRC66Q68CR7 880 aa13.18□□□□□ -0.3
PRKDC-206ENST00000536429 MACC1Q6ZN28 852 aa13.18□□□□□ -0.3
PRKDC-206ENST00000536429 BBS12Q6ZW61 710 aa13.18□□□□□ -0.3
PRKDC-206ENST00000536429 USP45Q70EL2 814 aa13.18□□□□□ -0.3
PRKDC-206ENST00000536429 ZC3H18Q86VM9 953 aaKnown RBP13.18□□□□□ -0.3
PRKDC-206ENST00000536429 PHACTR4Q8IZ21 702 aa13.18□□□□□ -0.3
PRKDC-206ENST00000536429 LPCAT1Q8NF37 534 aa13.18□□□□□ -0.3
PRKDC-206ENST00000536429 SPATA22Q8NHS9 363 aa13.18□□□□□ -0.3
PRKDC-206ENST00000536429 LMX1AQ8TE12 382 aa13.18□□□□□ -0.3
PRKDC-206ENST00000536429 TFB1MQ8WVM0 346 aaKnown RBP13.18□□□□□ -0.3
PRKDC-206ENST00000536429 TSACCQ96A04 125 aaPredicted RBP13.18□□□□□ -0.3
PRKDC-206ENST00000536429 DTD2Q96FN9 168 aa13.18□□□□□ -0.3
PRKDC-206ENST00000536429 FAM118BQ9BPY3 351 aa13.18□□□□□ -0.3
PRKDC-206ENST00000536429 LGR4Q9BXB1 951 aa13.18□□□□□ -0.3
PRKDC-206ENST00000536429 PCDH9Q9HC56 1237 aa13.18□□□□□ -0.3
PRKDC-206ENST00000536429 ADGRG1Q9Y653 693 aa13.18□□□□□ -0.3
PRKDC-206ENST00000536429 CAPN6Q9Y6Q1 641 aa13.18□□□□□ -0.3
PRKDC-206ENST00000536429 ANKRD36A6QL64 1941 aa13.17□□□□□ -0.3
PRKDC-206ENST00000536429 EPG5Q9HCE0 2579 aa13.17□□□□□ -0.3
PRKDC-206ENST00000536429 LY6G6EA0A0G2JKS1 128 aa13.17□□□□□ -0.3
PRKDC-206ENST00000536429 TMEM202A6NGA9 273 aa13.17□□□□□ -0.3
PRKDC-206ENST00000536429 TRIM16O95361 564 aa13.17□□□□□ -0.3
PRKDC-206ENST00000536429 MT-CYBP00156 380 aaPredicted RBP13.17□□□□□ -0.3
PRKDC-206ENST00000536429 C1SP09871 688 aa13.17□□□□□ -0.3
PRKDC-206ENST00000536429 CYP2A6P11509 494 aaPredicted RBP13.17□□□□□ -0.3
PRKDC-206ENST00000536429 CES1P23141 567 aa13.17□□□□□ -0.3
PRKDC-206ENST00000536429 ACADVLP49748 655 aa13.17□□□□□ -0.3
PRKDC-206ENST00000536429 PTSQ03393 145 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms