RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 ITPR1Q14643 2758 aa16.44■□□□□ 0.22
ATL3-202ENST00000535789 A0A0U1RQJ8 604 aa16.44■□□□□ 0.22
ATL3-202ENST00000535789 FAM149AA5PLN7 773 aa16.44■□□□□ 0.22
ATL3-202ENST00000535789 GCATO75600 419 aa16.44■□□□□ 0.22
ATL3-202ENST00000535789 RFPL3O75679 317 aa16.44■□□□□ 0.22
ATL3-202ENST00000535789 PRLP01236 227 aa16.44■□□□□ 0.22
ATL3-202ENST00000535789 PCCBP05166 539 aa16.44■□□□□ 0.22
ATL3-202ENST00000535789 PROS1P07225 676 aa16.44■□□□□ 0.22
ATL3-202ENST00000535789 MMP2P08253 660 aa16.44■□□□□ 0.22
ATL3-202ENST00000535789 ALPIP09923 528 aa16.44■□□□□ 0.22
ATL3-202ENST00000535789 ELFN1P0C7U0 828 aa16.44■□□□□ 0.22
ATL3-202ENST00000535789 TNNT1P13805 278 aa16.44■□□□□ 0.22
ATL3-202ENST00000535789 CDKN2BP42772 138 aa16.44■□□□□ 0.22
ATL3-202ENST00000535789 NOP2P46087 812 aaKnown RBP16.44■□□□□ 0.22
ATL3-202ENST00000535789 INPP5AQ14642 412 aa16.44■□□□□ 0.22
ATL3-202ENST00000535789 SMAD1Q15797 465 aaKnown RBP16.44■□□□□ 0.22
ATL3-202ENST00000535789 RALGPS1Q5JS13 557 aa16.44■□□□□ 0.22
ATL3-202ENST00000535789 CCNI2Q6ZMN8 369 aaPredicted RBP16.44■□□□□ 0.22
ATL3-202ENST00000535789 MAP7D3Q8IWC1 876 aa16.44■□□□□ 0.22
ATL3-202ENST00000535789 PHACTR4Q8IZ21 702 aa16.44■□□□□ 0.22
ATL3-202ENST00000535789 CBARPQ8N350 705 aaPredicted RBP16.44■□□□□ 0.22
ATL3-202ENST00000535789 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.44■□□□□ 0.22
ATL3-202ENST00000535789 CNTD1Q8N815 330 aa16.44■□□□□ 0.22
ATL3-202ENST00000535789 KIAA1524Q8TCG1 905 aa16.44■□□□□ 0.22
ATL3-202ENST00000535789 TDRD1Q9BXT4 1180 aaKnown RBP16.44■□□□□ 0.22
ATL3-202ENST00000535789 CEP41Q9BYV8 373 aa16.44■□□□□ 0.22
ATL3-202ENST00000535789 CLPBQ9H078 707 aa16.44■□□□□ 0.22
ATL3-202ENST00000535789 NBEAQ8NFP9 2946 aa16.44■□□□□ 0.22
ATL3-202ENST00000535789 CFAP69A5D8W1 941 aa16.43■□□□□ 0.22
ATL3-202ENST00000535789 KCNK1O00180 336 aa16.43■□□□□ 0.22
ATL3-202ENST00000535789 HEXIM1O94992 359 aaKnown RBP16.43■□□□□ 0.22
ATL3-202ENST00000535789 CCNB1P14635 433 aa16.43■□□□□ 0.22
ATL3-202ENST00000535789 PECAM1P16284 738 aaPredicted RBP16.43■□□□□ 0.22
ATL3-202ENST00000535789 JUNDP17535 347 aa16.43■□□□□ 0.22
ATL3-202ENST00000535789 CTPS1P17812 591 aa16.43■□□□□ 0.22
ATL3-202ENST00000535789 ACP1P24666 158 aa16.43■□□□□ 0.22
ATL3-202ENST00000535789 VIPR1P32241 457 aa16.43■□□□□ 0.22
ATL3-202ENST00000535789 SLC1A1P43005 524 aa16.43■□□□□ 0.22
ATL3-202ENST00000535789 HNRNPKP61978 463 aaKnown RBP eCLIP16.43■□□□□ 0.22
ATL3-202ENST00000535789 YPEL5P62699 121 aa16.43■□□□□ 0.22
ATL3-202ENST00000535789 ZNF211Q13398 564 aaPredicted RBP16.43■□□□□ 0.22
ATL3-202ENST00000535789 CAMK2BQ13554 666 aa16.43■□□□□ 0.22
ATL3-202ENST00000535789 NFATC4Q14934 902 aa16.43■□□□□ 0.22
ATL3-202ENST00000535789 LLGL1Q15334 1064 aa16.43■□□□□ 0.22
ATL3-202ENST00000535789 ST3GAL2Q16842 350 aa16.43■□□□□ 0.22
ATL3-202ENST00000535789 ALG11Q2TAA5 492 aa16.43■□□□□ 0.22
ATL3-202ENST00000535789 ZFYVE27Q5T4F4 411 aa16.43■□□□□ 0.22
ATL3-202ENST00000535789 TIGD7Q6NT04 549 aaPredicted RBP16.43■□□□□ 0.22
ATL3-202ENST00000535789 RFLNAQ6ZTI6 216 aa16.43■□□□□ 0.22
ATL3-202ENST00000535789 HSD11B1LQ7Z5J1 315 aa16.43■□□□□ 0.22
ATL3-202ENST00000535789 RHOT1Q8IXI2 618 aa16.43■□□□□ 0.22
ATL3-202ENST00000535789 CCDC13Q8IYE1 715 aa16.43■□□□□ 0.22
ATL3-202ENST00000535789 NSMCE1Q8WV22 266 aa16.43■□□□□ 0.22
ATL3-202ENST00000535789 KRT35Q92764 455 aa16.43■□□□□ 0.22
ATL3-202ENST00000535789 PDXPQ96GD0 296 aa16.43■□□□□ 0.22
ATL3-202ENST00000535789 APOLD1Q96LR9 279 aa16.43■□□□□ 0.22
ATL3-202ENST00000535789 IL12RB2Q99665 862 aa16.43■□□□□ 0.22
ATL3-202ENST00000535789 HERPUD2Q9BSE4 406 aa16.43■□□□□ 0.22
ATL3-202ENST00000535789 APOOQ9BUR5 198 aa16.43■□□□□ 0.22
ATL3-202ENST00000535789 C1QTNF7Q9BXJ2 289 aa16.43■□□□□ 0.22
ATL3-202ENST00000535789 POLR1EQ9GZS1 481 aaKnown RBP16.43■□□□□ 0.22
ATL3-202ENST00000535789 KCND1Q9NSA2 647 aa16.43■□□□□ 0.22
ATL3-202ENST00000535789 RBM22Q9NW64 420 aaKnown RBP eCLIP16.43■□□□□ 0.22
ATL3-202ENST00000535789 NLGN3Q9NZ94 848 aa16.43■□□□□ 0.22
ATL3-202ENST00000535789 PPP2R2CQ9Y2T4 447 aa16.43■□□□□ 0.22
ATL3-202ENST00000535789 PPIL1Q9Y3C6 166 aa16.43■□□□□ 0.22
ATL3-202ENST00000535789 PCDHGA1Q9Y5H4 931 aa16.43■□□□□ 0.22
ATL3-202ENST00000535789 HEY1Q9Y5J3 304 aa16.43■□□□□ 0.22
ATL3-202ENST00000535789 RAI2Q9Y5P3 530 aa16.43■□□□□ 0.22
ATL3-202ENST00000535789 ALG6Q9Y672 507 aa16.43■□□□□ 0.22
ATL3-202ENST00000535789 DUSP10Q9Y6W6 482 aa16.43■□□□□ 0.22
ATL3-202ENST00000535789 ACACAQ13085 2346 aa16.42■□□□□ 0.22
ATL3-202ENST00000535789 A0A0A6YYK5 440 aaPredicted RBP16.42■□□□□ 0.22
ATL3-202ENST00000535789 APOL1O14791 398 aa16.42■□□□□ 0.22
ATL3-202ENST00000535789 SCAMP1O15126 338 aa16.42■□□□□ 0.22
ATL3-202ENST00000535789 CASC3O15234 703 aaKnown RBP16.42■□□□□ 0.22
ATL3-202ENST00000535789 AQP9O43315 295 aa16.42■□□□□ 0.22
ATL3-202ENST00000535789 PSTPIP1O43586 416 aa16.42■□□□□ 0.22
ATL3-202ENST00000535789 SPOPO43791 374 aa16.42■□□□□ 0.22
ATL3-202ENST00000535789 LZTS3O60299 673 aaPredicted RBP16.42■□□□□ 0.22
ATL3-202ENST00000535789 KRT10P13645 584 aa16.42■□□□□ 0.22
ATL3-202ENST00000535789 THOP1P52888 689 aa16.42■□□□□ 0.22
ATL3-202ENST00000535789 DYNLT1P63172 113 aa16.42■□□□□ 0.22
ATL3-202ENST00000535789 IFI35P80217 286 aaPredicted RBP16.42■□□□□ 0.22
ATL3-202ENST00000535789 MTM1Q13496 603 aa16.42■□□□□ 0.22
ATL3-202ENST00000535789 C1orf61Q13536 156 aa16.42■□□□□ 0.22
ATL3-202ENST00000535789 SPA17Q15506 151 aa16.42■□□□□ 0.22
ATL3-202ENST00000535789 C11orf63Q6NUN7 778 aa16.42■□□□□ 0.22
ATL3-202ENST00000535789 ESRP1Q6NXG1 681 aaKnown RBP16.42■□□□□ 0.22
ATL3-202ENST00000535789 BBS5Q8N3I7 341 aa16.42■□□□□ 0.22
ATL3-202ENST00000535789 KDF1Q8NAX2 398 aaPredicted RBP16.42■□□□□ 0.22
ATL3-202ENST00000535789 TPCN2Q8NHX9 752 aa16.42■□□□□ 0.22
ATL3-202ENST00000535789 LGR4Q9BXB1 951 aa16.42■□□□□ 0.22
ATL3-202ENST00000535789 LACRTQ9GZZ8 138 aa16.42■□□□□ 0.22
ATL3-202ENST00000535789 FGF22Q9HCT0 170 aa16.42■□□□□ 0.22
ATL3-202ENST00000535789 SAE1Q9UBE0 346 aaPredicted RBP16.42■□□□□ 0.22
ATL3-202ENST00000535789 APOBEC3BQ9UH17 382 aaKnown RBP16.42■□□□□ 0.22
ATL3-202ENST00000535789 PHTF1Q9UMS5 762 aa16.42■□□□□ 0.22
ATL3-202ENST00000535789 TTLL3Q9Y4R7 772 aa16.42■□□□□ 0.22
ATL3-202ENST00000535789 TMEM202A6NGA9 273 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms