RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 UBE2R2Q712K3 238 aaPredicted RBP18.21■□□□□ 0.51
SFSWAP-203ENST00000535236 CCDC185Q8N715 623 aa18.21■□□□□ 0.51
SFSWAP-203ENST00000535236 OR6K2Q8NGY2 324 aa18.21■□□□□ 0.51
SFSWAP-203ENST00000535236 STK32AQ8WU08 396 aa18.21■□□□□ 0.51
SFSWAP-203ENST00000535236 RAD51AP1Q96B01 352 aa18.21■□□□□ 0.51
SFSWAP-203ENST00000535236 ACE2Q9BYF1 805 aaPredicted RBP18.21■□□□□ 0.51
SFSWAP-203ENST00000535236 MRPS7Q9Y2R9 242 aaKnown RBP18.21■□□□□ 0.51
SFSWAP-203ENST00000535236 DERAQ9Y315 318 aa18.21■□□□□ 0.51
SFSWAP-203ENST00000535236 RAP2CQ9Y3L5 183 aa18.21■□□□□ 0.51
SFSWAP-203ENST00000535236 NCANO14594 1321 aa18.21■□□□□ 0.51
SFSWAP-203ENST00000535236 hCG_1818297A0A087WSY0 165 aa18.21■□□□□ 0.51
SFSWAP-203ENST00000535236 AZIN1O14977 448 aa18.21■□□□□ 0.51
SFSWAP-203ENST00000535236 TOP3BO95985 862 aaKnown RBP18.21■□□□□ 0.51
SFSWAP-203ENST00000535236 LINC00032P0C843 101 aa18.21■□□□□ 0.51
SFSWAP-203ENST00000535236 PLA2G4EQ3MJ16 856 aa18.21■□□□□ 0.51
SFSWAP-203ENST00000535236 GLIS3Q8NEA6 775 aa18.21■□□□□ 0.51
SFSWAP-203ENST00000535236 PPTC7Q8NI37 304 aa18.21■□□□□ 0.51
SFSWAP-203ENST00000535236 ZNF563Q8TA94 476 aa18.21■□□□□ 0.51
SFSWAP-203ENST00000535236 ABCG8Q9H221 673 aa18.21■□□□□ 0.51
SFSWAP-203ENST00000535236 CRNNQ9UBG3 495 aaPredicted RBP18.21■□□□□ 0.51
SFSWAP-203ENST00000535236 PCYOX1Q9UHG3 505 aa18.21■□□□□ 0.51
SFSWAP-203ENST00000535236 C3orf18Q9UK00 162 aa18.21■□□□□ 0.51
SFSWAP-203ENST00000535236 ERGIC3Q9Y282 383 aa18.21■□□□□ 0.51
SFSWAP-203ENST00000535236 RFXANKO14593 260 aa18.21■□□□□ 0.51
SFSWAP-203ENST00000535236 PAGE1O75459 146 aa18.21■□□□□ 0.51
SFSWAP-203ENST00000535236 RHBDL3P58872 404 aa18.21■□□□□ 0.51
SFSWAP-203ENST00000535236 NOMO3P69849 1222 aa18.21■□□□□ 0.51
SFSWAP-203ENST00000535236 FMO1Q01740 532 aa18.21■□□□□ 0.51
SFSWAP-203ENST00000535236 LIPMQ5VYY2 423 aa18.21■□□□□ 0.51
SFSWAP-203ENST00000535236 C9orf57Q5W0N0 161 aa18.21■□□□□ 0.51
SFSWAP-203ENST00000535236 C17orf64Q86WR6 236 aa18.21■□□□□ 0.51
SFSWAP-203ENST00000535236 HIPK1Q86Z02 1210 aa18.21■□□□□ 0.51
SFSWAP-203ENST00000535236 SPATA6LQ8N4H0 392 aa18.21■□□□□ 0.51
SFSWAP-203ENST00000535236 ACAT2Q9BWD1 397 aa18.21■□□□□ 0.51
SFSWAP-203ENST00000535236 FBXO5Q9UKT4 447 aa18.21■□□□□ 0.51
SFSWAP-203ENST00000535236 ADSLP30566 484 aaPredicted RBP18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 FLT3LGP49771 235 aa18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 DUSP4Q13115 394 aa18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 PRKG2Q13237 762 aa18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 ITGA7Q13683 1181 aa18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 MPPE1Q53F39 396 aa18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 BBS12Q6ZW61 710 aa18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 CLP1Q92989 425 aaKnown RBP18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 CRISPLD1Q9H336 500 aa18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 RAB21Q9UL25 225 aa18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 ABHD14A-ACY1A0A1B0GW23 586 aa18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 IGFALSP35858 605 aa18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 EML3Q32P44 896 aa18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 ZIK1Q3SY52 487 aaPredicted RBP18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 ARCQ7LC44 396 aa18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 LRRN4Q8WUT4 740 aa18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 CKAP2Q8WWK9 683 aa18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 PIGUQ9H490 435 aa18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 TBC1D14Q9P2M4 693 aa18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 DEC1Q9P2X7 70 aa18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 GGA2Q9UJY4 613 aa18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 A0A1W2PQH9 124 aa18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 CLDN11O75508 207 aa18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 BANF1O75531 89 aa18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 UGT1A5P35504 534 aa18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 SSR2P43308 183 aa18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 WNT3AP56704 352 aa18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 SLC25A3Q00325 362 aa18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 EEF1DP3Q658K8 133 aa18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 SLC9A9Q8IVB4 645 aa18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 NXF3Q9H4D5 531 aaKnown RBP18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 XPR1Q9UBH6 696 aa18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 HECAQ9UBI9 543 aaPredicted RBP18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 SMIM35A0A1B0GVV1 85 aa18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 PSRC1Q6PGN9 363 aaPredicted RBP18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 C15orf52Q6ZUT6 534 aaKnown RBP18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 CFAP52Q8N1V2 620 aa18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 FAM98AQ8NCA5 519 aaKnown RBP18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 IL31RAQ8NI17 732 aa18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 NEK7Q8TDX7 302 aa18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 KLHL5Q96PQ7 755 aa18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 COMMD9Q9P000 198 aa18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 COL1A2P08123 1366 aa18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 TRIM38O00635 465 aa18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 PLSCR1O15162 318 aa18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 ABHD2P08910 425 aa18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 S100GP29377 79 aa18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 DCCP43146 1447 aa18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 BNIP2Q12982 314 aa18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 CAPN13Q6MZZ7 669 aaPredicted RBP18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 POTEHQ6S545 545 aa18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 OR52E6Q96RD3 313 aa18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 AARSD1Q9BTE6 412 aaKnown RBP18.2■□□□□ 0.5
SFSWAP-203ENST00000535236 ZBTB22O15209 634 aa18.19■□□□□ 0.5
SFSWAP-203ENST00000535236 PPIBP23284 216 aaKnown RBP18.19■□□□□ 0.5
SFSWAP-203ENST00000535236 MYL9P24844 172 aa18.19■□□□□ 0.5
SFSWAP-203ENST00000535236 KLHL12Q53G59 568 aa18.19■□□□□ 0.5
SFSWAP-203ENST00000535236 ZNF697Q5TEC3 545 aa18.19■□□□□ 0.5
SFSWAP-203ENST00000535236 FBXW8Q8N3Y1 598 aa18.19■□□□□ 0.5
SFSWAP-203ENST00000535236 FLCNQ8NFG4 579 aa18.19■□□□□ 0.5
SFSWAP-203ENST00000535236 FNIP1Q8TF40 1166 aa18.19■□□□□ 0.5
SFSWAP-203ENST00000535236 RGSL1A5PLK6 1076 aa18.19■□□□□ 0.5
SFSWAP-203ENST00000535236 CST1P01037 141 aa18.19■□□□□ 0.5
SFSWAP-203ENST00000535236 MANFP55145 182 aaKnown RBP18.19■□□□□ 0.5
SFSWAP-203ENST00000535236 TAS2R41P59536 307 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms