RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 AHDC1Q5TGY3 1603 aaPredicted RBP15.93■□□□□ 0.14
MCF2L-232ENST00000535094 SNX2O60749 519 aa15.93■□□□□ 0.14
MCF2L-232ENST00000535094 KATNA1O75449 491 aa15.93■□□□□ 0.14
MCF2L-232ENST00000535094 B3GAT3O94766 335 aa15.93■□□□□ 0.14
MCF2L-232ENST00000535094 MAGP20916 626 aa15.93■□□□□ 0.14
MCF2L-232ENST00000535094 SPIDRQ14159 915 aa15.93■□□□□ 0.14
MCF2L-232ENST00000535094 MIB1Q86YT6 1006 aa15.93■□□□□ 0.14
MCF2L-232ENST00000535094 ZC3H7AQ8IWR0 971 aaKnown RBP15.93■□□□□ 0.14
MCF2L-232ENST00000535094 LRRC52Q8N7C0 313 aa15.93■□□□□ 0.14
MCF2L-232ENST00000535094 CALML6Q8TD86 181 aa15.93■□□□□ 0.14
MCF2L-232ENST00000535094 COX4I2Q96KJ9 171 aa15.93■□□□□ 0.14
MCF2L-232ENST00000535094 VRTNQ9H8Y1 702 aa15.93■□□□□ 0.14
MCF2L-232ENST00000535094 SH3BP1Q9Y3L3 701 aa15.93■□□□□ 0.14
MCF2L-232ENST00000535094 KCTD3Q9Y597 815 aa15.93■□□□□ 0.14
MCF2L-232ENST00000535094 IGFBP6P24592 240 aaPredicted RBP15.93■□□□□ 0.14
MCF2L-232ENST00000535094 ELK4P28324 431 aa15.93■□□□□ 0.14
MCF2L-232ENST00000535094 OXTRP30559 389 aa15.93■□□□□ 0.14
MCF2L-232ENST00000535094 GRIK1P39086 918 aa15.93■□□□□ 0.14
MCF2L-232ENST00000535094 GRB7Q14451 532 aa15.93■□□□□ 0.14
MCF2L-232ENST00000535094 GPRIN1Q7Z2K8 1008 aa15.93■□□□□ 0.14
MCF2L-232ENST00000535094 LPPQ93052 612 aa15.93■□□□□ 0.14
MCF2L-232ENST00000535094 NSUN5Q96P11 429 aaKnown RBP15.93■□□□□ 0.14
MCF2L-232ENST00000535094 GAD1Q99259 594 aa15.93■□□□□ 0.14
MCF2L-232ENST00000535094 C17orf80Q9BSJ5 609 aa15.93■□□□□ 0.14
MCF2L-232ENST00000535094 SPC25Q9HBM1 224 aa15.93■□□□□ 0.14
MCF2L-232ENST00000535094 A0A087X1B8 175 aa15.92■□□□□ 0.14
MCF2L-232ENST00000535094 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.92■□□□□ 0.14
MCF2L-232ENST00000535094 DCLK1O15075 740 aa15.92■□□□□ 0.14
MCF2L-232ENST00000535094 MYL3P08590 195 aa15.92■□□□□ 0.14
MCF2L-232ENST00000535094 GSSP48637 474 aa15.92■□□□□ 0.14
MCF2L-232ENST00000535094 DIO3P55073 304 aa15.92■□□□□ 0.14
MCF2L-232ENST00000535094 SOX4Q06945 474 aaPredicted RBP15.92■□□□□ 0.14
MCF2L-232ENST00000535094 HERC3Q15034 1050 aa15.92■□□□□ 0.14
MCF2L-232ENST00000535094 FNDC5Q8NAU1 212 aa15.92■□□□□ 0.14
MCF2L-232ENST00000535094 BORCS5Q969J3 196 aa15.92■□□□□ 0.14
MCF2L-232ENST00000535094 PLEKHA8Q96JA3 519 aa15.92■□□□□ 0.14
MCF2L-232ENST00000535094 NSMCE2Q96MF7 247 aa15.92■□□□□ 0.14
MCF2L-232ENST00000535094 OLFM1Q99784 485 aa15.92■□□□□ 0.14
MCF2L-232ENST00000535094 GPATCH1Q9BRR8 931 aaKnown RBP15.92■□□□□ 0.14
MCF2L-232ENST00000535094 VPS45Q9NRW7 570 aa15.92■□□□□ 0.14
MCF2L-232ENST00000535094 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.92■□□□□ 0.14
MCF2L-232ENST00000535094 SCN1AP35498 2009 aa15.92■□□□□ 0.14
MCF2L-232ENST00000535094 M0R3G1 203 aa15.92■□□□□ 0.14
MCF2L-232ENST00000535094 PSMD3O43242 534 aa15.92■□□□□ 0.14
MCF2L-232ENST00000535094 AP1G1O43747 822 aa15.92■□□□□ 0.14
MCF2L-232ENST00000535094 SLC25A27O95847 323 aa15.92■□□□□ 0.14
MCF2L-232ENST00000535094 CDH3P22223 829 aa15.92■□□□□ 0.14
MCF2L-232ENST00000535094 ADSLP30566 484 aaPredicted RBP15.92■□□□□ 0.14
MCF2L-232ENST00000535094 NRG1Q02297 640 aaPredicted RBP15.92■□□□□ 0.14
MCF2L-232ENST00000535094 RAB39AQ14964 217 aa15.92■□□□□ 0.14
MCF2L-232ENST00000535094 PAFAH1B3Q15102 231 aaKnown RBP15.92■□□□□ 0.14
MCF2L-232ENST00000535094 PKDCCQ504Y2 493 aa15.92■□□□□ 0.14
MCF2L-232ENST00000535094 PRAMEF19Q5SWL8 479 aa15.92■□□□□ 0.14
MCF2L-232ENST00000535094 SDHAF4Q5VUM1 108 aa15.92■□□□□ 0.14
MCF2L-232ENST00000535094 TWIST2Q8WVJ9 160 aa15.92■□□□□ 0.14
MCF2L-232ENST00000535094 SNX27Q96L92 541 aa15.92■□□□□ 0.14
MCF2L-232ENST00000535094 TRIM43BA6NCK2 446 aa15.92■□□□□ 0.14
MCF2L-232ENST00000535094 AP3B1O00203 1094 aa15.92■□□□□ 0.14
MCF2L-232ENST00000535094 RSL1D1O76021 490 aaKnown RBP15.92■□□□□ 0.14
MCF2L-232ENST00000535094 RPS9P46781 194 aaKnown RBP15.92■□□□□ 0.14
MCF2L-232ENST00000535094 POU4F1Q01851 419 aa15.92■□□□□ 0.14
MCF2L-232ENST00000535094 LIPEQ05469 1076 aa15.92■□□□□ 0.14
MCF2L-232ENST00000535094 RGS21Q2M5E4 152 aa15.92■□□□□ 0.14
MCF2L-232ENST00000535094 ERMP1Q7Z2K6 904 aa15.92■□□□□ 0.14
MCF2L-232ENST00000535094 SLC22A9Q8IVM8 553 aa15.92■□□□□ 0.14
MCF2L-232ENST00000535094 CDC26Q8NHZ8 85 aa15.92■□□□□ 0.14
MCF2L-232ENST00000535094 ANKRD49Q8WVL7 239 aa15.92■□□□□ 0.14
MCF2L-232ENST00000535094 CENPIQ92674 756 aaPredicted RBP15.92■□□□□ 0.14
MCF2L-232ENST00000535094 ZNF597Q96LX8 424 aa15.92■□□□□ 0.14
MCF2L-232ENST00000535094 C3orf30Q96M34 536 aa15.92■□□□□ 0.14
MCF2L-232ENST00000535094 OSBPL2Q9H1P3 480 aa15.92■□□□□ 0.14
MCF2L-232ENST00000535094 TCAF1Q9Y4C2 921 aa15.92■□□□□ 0.14
MCF2L-232ENST00000535094 CCDC154A6NI56 674 aa15.91■□□□□ 0.14
MCF2L-232ENST00000535094 K7EPI3 171 aa15.91■□□□□ 0.14
MCF2L-232ENST00000535094 AZIN1O14977 448 aa15.91■□□□□ 0.14
MCF2L-232ENST00000535094 CLEC14AQ86T13 490 aa15.91■□□□□ 0.14
MCF2L-232ENST00000535094 TAC4Q86UU9 113 aa15.91■□□□□ 0.14
MCF2L-232ENST00000535094 CLYBLQ8N0X4 340 aa15.91■□□□□ 0.14
MCF2L-232ENST00000535094 EFHBQ8N7U6 833 aa15.91■□□□□ 0.14
MCF2L-232ENST00000535094 GLMNQ92990 594 aa15.91■□□□□ 0.14
MCF2L-232ENST00000535094 PCED1BQ96HM7 432 aa15.91■□□□□ 0.14
MCF2L-232ENST00000535094 B3GALT6Q96L58 329 aa15.91■□□□□ 0.14
MCF2L-232ENST00000535094 C12orf42Q96LP6 360 aa15.91■□□□□ 0.14
MCF2L-232ENST00000535094 TBATAQ96M53 351 aa15.91■□□□□ 0.14
MCF2L-232ENST00000535094 PPP1R10Q96QC0 940 aaKnown RBP15.91■□□□□ 0.14
MCF2L-232ENST00000535094 VAT1Q99536 393 aa15.91■□□□□ 0.14
MCF2L-232ENST00000535094 SMPD3Q9NY59 655 aaPredicted RBP15.91■□□□□ 0.14
MCF2L-232ENST00000535094 FBXW11Q9UKB1 542 aa15.91■□□□□ 0.14
MCF2L-232ENST00000535094 COL2A1P02458 1487 aaPredicted RBP15.91■□□□□ 0.14
MCF2L-232ENST00000535094 NME4O00746 187 aa15.91■□□□□ 0.14
MCF2L-232ENST00000535094 ARPC2O15144 300 aa15.91■□□□□ 0.14
MCF2L-232ENST00000535094 F9P00740 461 aa15.91■□□□□ 0.14
MCF2L-232ENST00000535094 LBPP18428 481 aa15.91■□□□□ 0.14
MCF2L-232ENST00000535094 GGT5P36269 586 aa15.91■□□□□ 0.14
MCF2L-232ENST00000535094 PNPLA4P41247 253 aa15.91■□□□□ 0.14
MCF2L-232ENST00000535094 APOFQ13790 326 aa15.91■□□□□ 0.14
MCF2L-232ENST00000535094 HMBOX1Q6NT76 420 aa15.91■□□□□ 0.14
MCF2L-232ENST00000535094 SCAMP5Q8TAC9 235 aa15.91■□□□□ 0.14
MCF2L-232ENST00000535094 CENPNQ96H22 339 aaPredicted RBP15.91■□□□□ 0.14
MCF2L-232ENST00000535094 ACOX2Q99424 681 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms