RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 MGAT5BQ3V5L5 792 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 FSCBQ5H9T9 825 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 SH2D4BQ5SQS7 431 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 NEPROQ6NW34 567 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 ESRP1Q6NXG1 681 aaKnown RBP9.72□□□□□ -0.85
CHKA-207ENST00000533728 EPGNQ6UW88 154 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 ZNF783Q6ZMS7 281 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 CMC1Q7Z7K0 106 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 CEP57Q86XR8 500 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 PLD6Q8N2A8 252 aaKnown RBP9.72□□□□□ -0.85
CHKA-207ENST00000533728 TMEM151AQ8N4L1 468 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 TEX9Q8N6V9 391 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 GPR150Q8NGU9 434 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 ARRDC2Q8TBH0 407 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 TRMT2BQ96GJ1 504 aaKnown RBP9.72□□□□□ -0.85
CHKA-207ENST00000533728 MYRFLQ96LU7 910 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 MIPEPQ99797 713 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 DDX50Q9BQ39 737 aaKnown RBP9.72□□□□□ -0.85
CHKA-207ENST00000533728 MRPL57Q9BQC6 102 aaKnown RBP9.72□□□□□ -0.85
CHKA-207ENST00000533728 APOL2Q9BQE5 337 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 CCDC28BQ9BUN5 200 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 ACE2Q9BYF1 805 aaPredicted RBP9.72□□□□□ -0.85
CHKA-207ENST00000533728 POLR1EQ9GZS1 481 aaKnown RBP9.72□□□□□ -0.85
CHKA-207ENST00000533728 ILKAPQ9H0C8 392 aaPredicted RBP9.72□□□□□ -0.85
CHKA-207ENST00000533728 IGFLR1Q9H665 355 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 CWH43Q9H720 699 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 PDFQ9HBH1 243 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 CD248Q9HCU0 757 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 NT5MQ9NPB1 228 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 TAS2R1Q9NYW7 299 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 UBP1Q9NZI7 540 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 AFF4Q9UHB7 1163 aaKnown RBP9.72□□□□□ -0.85
CHKA-207ENST00000533728 SLC39A10Q9ULF5 831 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 CREBBPQ92793 2442 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 FREM2Q5SZK8 3169 aa9.71□□□□□ -0.85
CHKA-207ENST00000533728 GOLGA8QA0A0J9YX86 632 aa9.71□□□□□ -0.86
CHKA-207ENST00000533728 GOLGA8OA6NCC3 632 aa9.71□□□□□ -0.86
CHKA-207ENST00000533728 GOLGA8NF8WBI6 632 aa9.71□□□□□ -0.86
CHKA-207ENST00000533728 HGSO14964 777 aaPredicted RBP9.71□□□□□ -0.86
CHKA-207ENST00000533728 TLR5O60602 858 aa9.71□□□□□ -0.86
CHKA-207ENST00000533728 VAPBO95292 243 aa9.71□□□□□ -0.86
CHKA-207ENST00000533728 HSPA4LO95757 839 aa9.71□□□□□ -0.86
CHKA-207ENST00000533728 TOP3BO95985 862 aaKnown RBP9.71□□□□□ -0.86
CHKA-207ENST00000533728 RBP1P09455 135 aa9.71□□□□□ -0.86
CHKA-207ENST00000533728 OGNP20774 298 aaKnown RBP9.71□□□□□ -0.86
CHKA-207ENST00000533728 IBSPP21815 317 aaPredicted RBP9.71□□□□□ -0.86
CHKA-207ENST00000533728 GABRB3P28472 473 aa9.71□□□□□ -0.86
CHKA-207ENST00000533728 ATP5C1P36542 298 aaKnown RBP9.71□□□□□ -0.86
CHKA-207ENST00000533728 ETFBP38117 255 aa9.71□□□□□ -0.86
CHKA-207ENST00000533728 SLC11A2P49281 568 aa9.71□□□□□ -0.86
CHKA-207ENST00000533728 IDH3AP50213 366 aa9.71□□□□□ -0.86
CHKA-207ENST00000533728 NAA20P61599 178 aa9.71□□□□□ -0.86
CHKA-207ENST00000533728 DEFB103AP81534 67 aa9.71□□□□□ -0.86
CHKA-207ENST00000533728 SLC10A7Q0GE19 358 aa9.71□□□□□ -0.86
CHKA-207ENST00000533728 RCN2Q14257 317 aa9.71□□□□□ -0.86
CHKA-207ENST00000533728 LBRQ14739 615 aaKnown RBP9.71□□□□□ -0.86
CHKA-207ENST00000533728 ALFQ53S48 1182 aa9.71□□□□□ -0.86
CHKA-207ENST00000533728 RTP2Q5QGT7 225 aa9.71□□□□□ -0.86
CHKA-207ENST00000533728 SDHAF4Q5VUM1 108 aa9.71□□□□□ -0.86
CHKA-207ENST00000533728 RAP1GAP2Q684P5 730 aa9.71□□□□□ -0.86
CHKA-207ENST00000533728 LRRC8EQ6NSJ5 796 aa9.71□□□□□ -0.86
CHKA-207ENST00000533728 RNF19BQ6ZMZ0 732 aa9.71□□□□□ -0.86
CHKA-207ENST00000533728 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.71□□□□□ -0.867e-6■□□□□ 11
CHKA-207ENST00000533728 ZCCHC23Q6ZST2 131 aa9.71□□□□□ -0.86
CHKA-207ENST00000533728 RAPH1Q70E73 1250 aa9.71□□□□□ -0.86
CHKA-207ENST00000533728 PIWIL4Q7Z3Z4 852 aaKnown RBP9.71□□□□□ -0.86
CHKA-207ENST00000533728 SETD3Q86TU7 594 aaPredicted RBP9.71□□□□□ -0.86
CHKA-207ENST00000533728 NETO1Q8TDF5 533 aa9.71□□□□□ -0.86
CHKA-207ENST00000533728 IGSF8Q969P0 613 aa9.71□□□□□ -0.86
CHKA-207ENST00000533728 MCUR1Q96AQ8 359 aa9.71□□□□□ -0.86
CHKA-207ENST00000533728 FAR2Q96K12 515 aa9.71□□□□□ -0.86
CHKA-207ENST00000533728 CNDP1Q96KN2 507 aa9.71□□□□□ -0.86
CHKA-207ENST00000533728 RILPQ96NA2 401 aa9.71□□□□□ -0.86
CHKA-207ENST00000533728 SAMD11Q96NU1 681 aa9.71□□□□□ -0.86
CHKA-207ENST00000533728 RPRD1AQ96P16 312 aaPredicted RBP9.71□□□□□ -0.86
CHKA-207ENST00000533728 GPR78Q96P69 363 aa9.71□□□□□ -0.86
CHKA-207ENST00000533728 GATA5Q9BWX5 397 aaPredicted RBP9.71□□□□□ -0.86
CHKA-207ENST00000533728 MRPL46Q9H2W6 279 aaKnown RBP9.71□□□□□ -0.86
CHKA-207ENST00000533728 POPDC3Q9HBV1 291 aa9.71□□□□□ -0.86
CHKA-207ENST00000533728 NUDT5Q9UKK9 219 aa9.71□□□□□ -0.86
CHKA-207ENST00000533728 SCN8AQ9UQD0 1980 aa9.71□□□□□ -0.86
CHKA-207ENST00000533728 RALGAPA1Q6GYQ0 2036 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 ILVBLA1L0T0 632 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 B2RBV5 119 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 J3KR12 359 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 MATN2O00339 956 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 HDAC3O15379 428 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 CLDN11O75508 207 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 LYPLA1O75608 230 aaPredicted RBP9.7□□□□□ -0.86
CHKA-207ENST00000533728 TM7SF2O76062 418 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 CNTN5O94779 1100 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 ABLIM3O94929 683 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 WISP3O95389 354 aaPredicted RBP9.7□□□□□ -0.86
CHKA-207ENST00000533728 ATXN1LP0C7T5 689 aaKnown RBP9.7□□□□□ -0.86
CHKA-207ENST00000533728 LINC00271P0C7V0 271 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 ATF6P18850 670 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 GNAZP19086 355 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 ATP5F1P24539 256 aaPredicted RBP9.7□□□□□ -0.86
CHKA-207ENST00000533728 OR1E1P30953 314 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 CD86P42081 329 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms