RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 GAREM1Q9H706 876 aa2.76□□□□□ -1.97
ATM-220ENST00000533526 C17orf75Q9HAS0 396 aa2.76□□□□□ -1.97
ATM-220ENST00000533526 PCDH9Q9HC56 1237 aa2.76□□□□□ -1.97
ATM-220ENST00000533526 MKKSQ9NPJ1 570 aaPredicted RBP2.76□□□□□ -1.97
ATM-220ENST00000533526 ASAH2Q9NR71 780 aa2.76□□□□□ -1.97
ATM-220ENST00000533526 TAS2R10Q9NYW0 307 aa2.76□□□□□ -1.97
ATM-220ENST00000533526 C9orf78Q9NZ63 289 aaPredicted RBP2.76□□□□□ -1.97
ATM-220ENST00000533526 CTNNAL1Q9UBT7 734 aa2.76□□□□□ -1.97
ATM-220ENST00000533526 FBXO9Q9UK97 447 aaPredicted RBP2.76□□□□□ -1.97
ATM-220ENST00000533526 STON1Q9Y6Q2 735 aa2.76□□□□□ -1.97
ATM-220ENST00000533526 SAA2-SAA4A0A096LPE2 208 aa2.75□□□□□ -1.97
ATM-220ENST00000533526 A0A1B0GUV1 79 aa2.75□□□□□ -1.97
ATM-220ENST00000533526 GOLGA6L9A6NEM1 432 aa2.75□□□□□ -1.97
ATM-220ENST00000533526 A6NLC8 198 aa2.75□□□□□ -1.97
ATM-220ENST00000533526 SRRM3A6NNA2 597 aaPredicted RBP2.75□□□□□ -1.97
ATM-220ENST00000533526 SMTNL1A8MU46 457 aa2.75□□□□□ -1.97
ATM-220ENST00000533526 NDUFS7O75251 213 aa2.75□□□□□ -1.97
ATM-220ENST00000533526 RFPL2O75678 378 aa2.75□□□□□ -1.97
ATM-220ENST00000533526 CLDN14O95500 239 aa2.75□□□□□ -1.97
ATM-220ENST00000533526 PMS2P2O95744 297 aa2.75□□□□□ -1.97
ATM-220ENST00000533526 SSTR2P30874 369 aa2.75□□□□□ -1.97
ATM-220ENST00000533526 CDAP32320 146 aa2.75□□□□□ -1.97
ATM-220ENST00000533526 CTCFP49711 727 aaPredicted RBP2.75□□□□□ -1.97
ATM-220ENST00000533526 COMPP49747 757 aaPredicted RBP2.75□□□□□ -1.97
ATM-220ENST00000533526 EEF1A2Q05639 463 aaKnown RBP2.75□□□□□ -1.97
ATM-220ENST00000533526 DDR1Q08345 913 aa2.75□□□□□ -1.97
ATM-220ENST00000533526 SNTA1Q13424 505 aa2.75□□□□□ -1.97
ATM-220ENST00000533526 TNFAIP1Q13829 316 aa2.75□□□□□ -1.97
ATM-220ENST00000533526 CCNG2Q16589 344 aa2.75□□□□□ -1.97
ATM-220ENST00000533526 USP41Q3LFD5 358 aa2.75□□□□□ -1.97
ATM-220ENST00000533526 ALFQ53S48 1182 aa2.75□□□□□ -1.97
ATM-220ENST00000533526 LRRC8EQ6NSJ5 796 aa2.75□□□□□ -1.97
ATM-220ENST00000533526 MMS22LQ6ZRQ5 1243 aa2.75□□□□□ -1.97
ATM-220ENST00000533526 MTSS1LQ765P7 747 aa2.75□□□□□ -1.97
ATM-220ENST00000533526 TAOK1Q7L7X3 1001 aa2.75□□□□□ -1.97
ATM-220ENST00000533526 NOXA1Q86UR1 476 aa2.75□□□□□ -1.97
ATM-220ENST00000533526 WDR63Q8IWG1 891 aa2.75□□□□□ -1.97
ATM-220ENST00000533526 DSELQ8IZU8 1212 aa2.75□□□□□ -1.97
ATM-220ENST00000533526 ZBTB2Q8N680 514 aa2.75□□□□□ -1.97
ATM-220ENST00000533526 KCNH5Q8NCM2 988 aa2.75□□□□□ -1.97
ATM-220ENST00000533526 NAXEQ8NCW5 288 aa2.75□□□□□ -1.97
ATM-220ENST00000533526 HUS1BQ8NHY5 278 aa2.75□□□□□ -1.97
ATM-220ENST00000533526 NEK9Q8TD19 979 aa2.75□□□□□ -1.97
ATM-220ENST00000533526 SLC41A2Q96JW4 573 aa2.75□□□□□ -1.97
ATM-220ENST00000533526 NR1H4Q96RI1 486 aaPredicted RBP2.75□□□□□ -1.97
ATM-220ENST00000533526 LBHD1Q9BQE6 289 aaPredicted RBP2.75□□□□□ -1.97
ATM-220ENST00000533526 UBN1Q9NPG3 1134 aa2.75□□□□□ -1.97
ATM-220ENST00000533526 GPR108Q9NPR9 543 aa2.75□□□□□ -1.97
ATM-220ENST00000533526 HAO1Q9UJM8 370 aa2.75□□□□□ -1.97
ATM-220ENST00000533526 TTC7AQ9ULT0 858 aaPredicted RBP2.75□□□□□ -1.97
ATM-220ENST00000533526 ERVK-11Q9UQG0 969 aa2.75□□□□□ -1.97
ATM-220ENST00000533526 NAALADL1Q9UQQ1 740 aa2.75□□□□□ -1.97
ATM-220ENST00000533526 AAR2Q9Y312 384 aaKnown RBP2.75□□□□□ -1.97
ATM-220ENST00000533526 KDM3AQ9Y4C1 1321 aa2.74□□□□□ -1.97
ATM-220ENST00000533526 CLGNO14967 610 aa2.74□□□□□ -1.97
ATM-220ENST00000533526 TNFSF14O43557 240 aa2.74□□□□□ -1.97
ATM-220ENST00000533526 PLRG1O43660 514 aaKnown RBP2.74□□□□□ -1.97
ATM-220ENST00000533526 LDB3O75112 727 aa2.74□□□□□ -1.97
ATM-220ENST00000533526 UBL4AP11441 157 aa2.74□□□□□ -1.97
ATM-220ENST00000533526 EDN2P20800 178 aa2.74□□□□□ -1.97
ATM-220ENST00000533526 MAOAP21397 527 aa2.74□□□□□ -1.97
ATM-220ENST00000533526 CASP6P55212 293 aa2.74□□□□□ -1.97
ATM-220ENST00000533526 SEC61BP60468 96 aaKnown RBP2.74□□□□□ -1.97
ATM-220ENST00000533526 ERVFC1-1P60608 527 aa2.74□□□□□ -1.97
ATM-220ENST00000533526 SORDQ00796 357 aa2.74□□□□□ -1.97
ATM-220ENST00000533526 POU5F1BQ06416 359 aa2.74□□□□□ -1.97
ATM-220ENST00000533526 ZNF155Q12901 538 aaPredicted RBP2.74□□□□□ -1.97
ATM-220ENST00000533526 OLIG2Q13516 323 aa2.74□□□□□ -1.97
ATM-220ENST00000533526 NAE1Q13564 534 aa2.74□□□□□ -1.97
ATM-220ENST00000533526 DRAP1Q14919 205 aaPredicted RBP2.74□□□□□ -1.97
ATM-220ENST00000533526 EFNB3Q15768 340 aa2.74□□□□□ -1.97
ATM-220ENST00000533526 C6orf141Q5SZD1 244 aa2.74□□□□□ -1.97
ATM-220ENST00000533526 GGNBP1Q5YKI7 109 aa2.74□□□□□ -1.97
ATM-220ENST00000533526 ANKRD54Q6NXT1 300 aa2.74□□□□□ -1.97
ATM-220ENST00000533526 CDC73Q6P1J9 531 aa2.74□□□□□ -1.97
ATM-220ENST00000533526 FBXO46Q6PJ61 603 aaPredicted RBP2.74□□□□□ -1.97
ATM-220ENST00000533526 LCTLQ6UWM7 567 aa2.74□□□□□ -1.97
ATM-220ENST00000533526 UNQ6126/PRO20091Q6UXV3 157 aa2.74□□□□□ -1.97
ATM-220ENST00000533526 B3GNT6Q6ZMB0 384 aa2.74□□□□□ -1.97
ATM-220ENST00000533526 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.74□□□□□ -1.97
ATM-220ENST00000533526 TDRPQ86YL5 185 aa2.74□□□□□ -1.97
ATM-220ENST00000533526 SLC35F3Q8IY50 421 aa2.74□□□□□ -1.97
ATM-220ENST00000533526 SPATA6LQ8N4H0 392 aa2.74□□□□□ -1.97
ATM-220ENST00000533526 RBMXL3Q8N7X1 1067 aaKnown RBP2.74□□□□□ -1.97
ATM-220ENST00000533526 CADM4Q8NFZ8 388 aa2.74□□□□□ -1.97
ATM-220ENST00000533526 RFFLQ8WZ73 363 aa2.74□□□□□ -1.97
ATM-220ENST00000533526 TANKQ92844 425 aa2.74□□□□□ -1.97
ATM-220ENST00000533526 RRP36Q96EU6 259 aaKnown RBP2.74□□□□□ -1.97
ATM-220ENST00000533526 C3orf30Q96M34 536 aa2.74□□□□□ -1.97
ATM-220ENST00000533526 HARBI1Q96MB7 349 aa2.74□□□□□ -1.97
ATM-220ENST00000533526 TMEM68Q96MH6 324 aa2.74□□□□□ -1.97
ATM-220ENST00000533526 PPM1MQ96MI6 270 aa2.74□□□□□ -1.97
ATM-220ENST00000533526 AGXT2Q9BYV1 514 aa2.74□□□□□ -1.97
ATM-220ENST00000533526 IFIH1Q9BYX4 1025 aaKnown RBP2.74□□□□□ -1.97
ATM-220ENST00000533526 NDST4Q9H3R1 872 aa2.74□□□□□ -1.97
ATM-220ENST00000533526 RETREG1Q9H6L5 497 aa2.74□□□□□ -1.97
ATM-220ENST00000533526 ESRP2Q9H6T0 727 aaKnown RBP2.74□□□□□ -1.97
ATM-220ENST00000533526 ZNF556Q9HAH1 456 aa2.74□□□□□ -1.97
ATM-220ENST00000533526 DDX4Q9NQI0 724 aaKnown RBP2.74□□□□□ -1.97
ATM-220ENST00000533526 CNGB3Q9NQW8 809 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms