RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 GRIA1P42261 906 aa17.5■□□□□ 0.39
NXF1-216ENST00000533499 PTPN5P54829 565 aa17.5■□□□□ 0.39
NXF1-216ENST00000533499 RPS21P63220 83 aaKnown RBP17.5■□□□□ 0.39
NXF1-216ENST00000533499 SLC7A5Q01650 507 aa17.5■□□□□ 0.39
NXF1-216ENST00000533499 RALGDSQ12967 914 aa17.5■□□□□ 0.39
NXF1-216ENST00000533499 MTM1Q13496 603 aa17.5■□□□□ 0.39
NXF1-216ENST00000533499 CNGA3Q16281 694 aa17.5■□□□□ 0.39
NXF1-216ENST00000533499 TMEM52BQ4KMG9 183 aa17.5■□□□□ 0.39
NXF1-216ENST00000533499 ANKRD22Q5VYY1 191 aa17.5■□□□□ 0.39
NXF1-216ENST00000533499 LRRC66Q68CR7 880 aa17.5■□□□□ 0.39
NXF1-216ENST00000533499 KCTD11Q693B1 232 aa17.5■□□□□ 0.39
NXF1-216ENST00000533499 KIAA1161Q6NSJ0 714 aa17.5■□□□□ 0.39
NXF1-216ENST00000533499 CRTC1Q6UUV9 634 aa17.5■□□□□ 0.39
NXF1-216ENST00000533499 RANBP10Q6VN20 620 aa17.5■□□□□ 0.39
NXF1-216ENST00000533499 LYSMD3Q7Z3D4 306 aa17.5■□□□□ 0.39
NXF1-216ENST00000533499 NOA1Q8NC60 698 aaKnown RBP17.5■□□□□ 0.39
NXF1-216ENST00000533499 CPT1BQ92523 772 aa17.5■□□□□ 0.39
NXF1-216ENST00000533499 FAM131CQ96AQ9 280 aa17.5■□□□□ 0.39
NXF1-216ENST00000533499 MCCC1Q96RQ3 725 aaPredicted RBP17.5■□□□□ 0.39
NXF1-216ENST00000533499 LRRC1Q9BTT6 524 aa17.5■□□□□ 0.39
NXF1-216ENST00000533499 KDM4CQ9H3R0 1056 aa17.5■□□□□ 0.39
NXF1-216ENST00000533499 UTP11Q9Y3A2 253 aaKnown RBP17.5■□□□□ 0.39
NXF1-216ENST00000533499 ZNF711Q9Y462 761 aa17.5■□□□□ 0.39
NXF1-216ENST00000533499 PLXND1Q9Y4D7 1925 aa17.5■□□□□ 0.39
NXF1-216ENST00000533499 SPAG17Q6Q759 2223 aa17.49■□□□□ 0.39
NXF1-216ENST00000533499 DOCK9Q9BZ29 2069 aa17.49■□□□□ 0.39
NXF1-216ENST00000533499 DNALI1O14645 258 aaPredicted RBP17.49■□□□□ 0.39
NXF1-216ENST00000533499 BUD23O43709 281 aaKnown RBP17.49■□□□□ 0.39
NXF1-216ENST00000533499 TM7SF2O76062 418 aa17.49■□□□□ 0.39
NXF1-216ENST00000533499 HEXIM1O94992 359 aaKnown RBP17.49■□□□□ 0.39
NXF1-216ENST00000533499 C6P13671 934 aa17.49■□□□□ 0.39
NXF1-216ENST00000533499 LHCGRP22888 699 aa17.49■□□□□ 0.39
NXF1-216ENST00000533499 MAOBP27338 520 aa17.49■□□□□ 0.39
NXF1-216ENST00000533499 PTGER3P43115 390 aa17.49■□□□□ 0.39
NXF1-216ENST00000533499 SESN2P58004 480 aaPredicted RBP17.49■□□□□ 0.39
NXF1-216ENST00000533499 SARNPP82979 210 aaKnown RBP17.49■□□□□ 0.39
NXF1-216ENST00000533499 KCNJ11Q14654 390 aa17.49■□□□□ 0.39
NXF1-216ENST00000533499 PLK5Q496M5 336 aa17.49■□□□□ 0.39
NXF1-216ENST00000533499 NEK5Q6P3R8 708 aa17.49■□□□□ 0.39
NXF1-216ENST00000533499 PPIL6Q8IXY8 311 aa17.49■□□□□ 0.39
NXF1-216ENST00000533499 FOXJ1Q92949 421 aa17.49■□□□□ 0.39
NXF1-216ENST00000533499 BIRC7Q96CA5 298 aa17.49■□□□□ 0.39
NXF1-216ENST00000533499 SNF8Q96H20 258 aa17.49■□□□□ 0.39
NXF1-216ENST00000533499 RAB17Q9H0T7 212 aa17.49■□□□□ 0.39
NXF1-216ENST00000533499 DUSP15Q9H1R2 295 aaPredicted RBP17.49■□□□□ 0.39
NXF1-216ENST00000533499 EIF2B3Q9NR50 452 aaKnown RBP17.49■□□□□ 0.39
NXF1-216ENST00000533499 ZFR2Q9UPR6 939 aaKnown RBP17.49■□□□□ 0.39
NXF1-216ENST00000533499 FNDC3AQ9Y2H6 1198 aaKnown RBP17.49■□□□□ 0.39
NXF1-216ENST00000533499 CCDC78A2IDD5 438 aa17.48■□□□□ 0.39
NXF1-216ENST00000533499 METTL12A8MUP2 240 aa17.48■□□□□ 0.39
NXF1-216ENST00000533499 LILRB5O75023 590 aa17.48■□□□□ 0.39
NXF1-216ENST00000533499 PAK4O96013 591 aaPredicted RBP17.48■□□□□ 0.39
NXF1-216ENST00000533499 TPSB2P20231 275 aa17.48■□□□□ 0.39
NXF1-216ENST00000533499 CDH17Q12864 832 aa17.48■□□□□ 0.39
NXF1-216ENST00000533499 POU6F1Q14863 301 aa17.48■□□□□ 0.39
NXF1-216ENST00000533499 TPSAB1Q15661 275 aa17.48■□□□□ 0.39
NXF1-216ENST00000533499 SETMARQ53H47 684 aaPredicted RBP17.48■□□□□ 0.39
NXF1-216ENST00000533499 LYSMD4Q5XG99 296 aa17.48■□□□□ 0.39
NXF1-216ENST00000533499 PMS2CLQ68D20 193 aa17.48■□□□□ 0.39
NXF1-216ENST00000533499 LIPIQ6XZB0 460 aa17.48■□□□□ 0.39
NXF1-216ENST00000533499 GLT6D1Q7Z4J2 308 aa17.48■□□□□ 0.39
NXF1-216ENST00000533499 HSD11B1LQ7Z5J1 315 aa17.48■□□□□ 0.39
NXF1-216ENST00000533499 PCGF5Q86SE9 256 aa17.48■□□□□ 0.39
NXF1-216ENST00000533499 TRIM69Q86WT6 500 aa17.48■□□□□ 0.39
NXF1-216ENST00000533499 SLC41A1Q8IVJ1 513 aa17.48■□□□□ 0.39
NXF1-216ENST00000533499 MMGT1Q8N4V1 131 aa17.48■□□□□ 0.39
NXF1-216ENST00000533499 CADM4Q8NFZ8 388 aa17.48■□□□□ 0.39
NXF1-216ENST00000533499 SPOCK2Q92563 424 aa17.48■□□□□ 0.39
NXF1-216ENST00000533499 ERP44Q9BS26 406 aa17.48■□□□□ 0.39
NXF1-216ENST00000533499 SLC17A9Q9BYT1 436 aa17.48■□□□□ 0.39
NXF1-216ENST00000533499 IRF2BPLQ9H1B7 796 aa17.48■□□□□ 0.39
NXF1-216ENST00000533499 ZFYVE1Q9HBF4 777 aa17.48■□□□□ 0.39
NXF1-216ENST00000533499 MAGEE1Q9HCI5 957 aa17.48■□□□□ 0.39
NXF1-216ENST00000533499 FZD3Q9NPG1 666 aa17.48■□□□□ 0.39
NXF1-216ENST00000533499 EIF2B4Q9UI10 523 aaKnown RBP17.48■□□□□ 0.39
NXF1-216ENST00000533499 CD84Q9UIB8 345 aa17.48■□□□□ 0.39
NXF1-216ENST00000533499 ANAPC5Q9UJX4 755 aa17.48■□□□□ 0.39
NXF1-216ENST00000533499 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.48■□□□□ 0.39
NXF1-216ENST00000533499 PPIL1Q9Y3C6 166 aa17.48■□□□□ 0.39
NXF1-216ENST00000533499 ATXN2Q99700 1313 aaKnown RBP17.47■□□□□ 0.39
NXF1-216ENST00000533499 AURKAO14965 403 aa17.47■□□□□ 0.39
NXF1-216ENST00000533499 TMEM63AO94886 807 aa17.47■□□□□ 0.39
NXF1-216ENST00000533499 SUN1O94901 812 aa17.47■□□□□ 0.39
NXF1-216ENST00000533499 IGHV4-34P06331 123 aa17.47■□□□□ 0.39
NXF1-216ENST00000533499 ETV3P41162 512 aa17.47■□□□□ 0.39
NXF1-216ENST00000533499 RPL21P46778 160 aaKnown RBP17.47■□□□□ 0.39
NXF1-216ENST00000533499 CCR5P51681 352 aa17.47■□□□□ 0.39
NXF1-216ENST00000533499 ITGA8P53708 1063 aa17.47■□□□□ 0.39
NXF1-216ENST00000533499 CREB5Q02930 508 aa17.47■□□□□ 0.39
NXF1-216ENST00000533499 CALCOCO2Q13137 446 aa17.47■□□□□ 0.39
NXF1-216ENST00000533499 ZNF284Q2VY69 593 aa17.47■□□□□ 0.39
NXF1-216ENST00000533499 WDR45BQ5MNZ6 344 aa17.47■□□□□ 0.39
NXF1-216ENST00000533499 TEX35Q5T0J7 233 aa17.47■□□□□ 0.39
NXF1-216ENST00000533499 CERCAMQ5T4B2 595 aa17.47■□□□□ 0.39
NXF1-216ENST00000533499 DENND5AQ6IQ26 1287 aa17.47■□□□□ 0.39
NXF1-216ENST00000533499 KLHDC8BQ8IXV7 354 aa17.47■□□□□ 0.39
NXF1-216ENST00000533499 PIGKQ92643 395 aa17.47■□□□□ 0.39
NXF1-216ENST00000533499 SRPK1Q96SB4 655 aaKnown RBP17.47■□□□□ 0.39
NXF1-216ENST00000533499 PCED1AQ9H1Q7 454 aa17.47■□□□□ 0.39
NXF1-216ENST00000533499 L2HGDHQ9H9P8 463 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms