RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 ZNF280BQ86YH2 543 aa12.45□□□□□ -0.42
RAD50-209ENST00000533482 WDR60Q8WVS4 1066 aa12.45□□□□□ -0.42
RAD50-209ENST00000533482 GFM2Q969S9 779 aaKnown RBP12.45□□□□□ -0.42
RAD50-209ENST00000533482 MAF1Q9H063 256 aa12.45□□□□□ -0.42
RAD50-209ENST00000533482 TNKS2Q9H2K2 1166 aa12.45□□□□□ -0.42
RAD50-209ENST00000533482 AZIN1O14977 448 aa12.45□□□□□ -0.42
RAD50-209ENST00000533482 GLUD2P49448 558 aa12.45□□□□□ -0.42
RAD50-209ENST00000533482 CDC16Q13042 620 aa12.45□□□□□ -0.42
RAD50-209ENST00000533482 PITRM1Q5JRX3 1037 aa12.45□□□□□ -0.42
RAD50-209ENST00000533482 SDE2Q6IQ49 451 aa12.45□□□□□ -0.42
RAD50-209ENST00000533482 CLVS1Q8IUQ0 354 aaPredicted RBP12.45□□□□□ -0.42
RAD50-209ENST00000533482 TP53INP2Q8IXH6 220 aa12.45□□□□□ -0.42
RAD50-209ENST00000533482 HEXDCQ8WVB3 486 aa12.45□□□□□ -0.42
RAD50-209ENST00000533482 EPB41L4BQ9H329 900 aa12.45□□□□□ -0.42
RAD50-209ENST00000533482 SYNDIG1Q9H7V2 258 aa12.45□□□□□ -0.42
RAD50-209ENST00000533482 CNTN3Q9P232 1028 aa12.45□□□□□ -0.42
RAD50-209ENST00000533482 SLC7A8Q9UHI5 535 aa12.45□□□□□ -0.42
RAD50-209ENST00000533482 TDRKHQ9Y2W6 561 aaKnown RBP12.45□□□□□ -0.42
RAD50-209ENST00000533482 AGRPO00253 132 aa12.45□□□□□ -0.42
RAD50-209ENST00000533482 ATP6V1E1P36543 226 aa12.45□□□□□ -0.42
RAD50-209ENST00000533482 NEK3P51956 506 aa12.45□□□□□ -0.42
RAD50-209ENST00000533482 CRY1Q16526 586 aa12.45□□□□□ -0.42
RAD50-209ENST00000533482 FBXO22Q8NEZ5 403 aa12.45□□□□□ -0.42
RAD50-209ENST00000533482 DNAJC1Q96KC8 554 aaKnown RBP12.45□□□□□ -0.42
RAD50-209ENST00000533482 CCSER2Q9H7U1 834 aa12.45□□□□□ -0.42
RAD50-209ENST00000533482 SPG21Q9NZD8 308 aa12.45□□□□□ -0.42
RAD50-209ENST00000533482 CEP290O15078 2479 aa12.45□□□□□ -0.42
RAD50-209ENST00000533482 GLI3P10071 1580 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 TRAV19A0A0A6YYK7 116 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 DPPA5A6NC42 116 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 NEDD8-MDP1E9PL57 170 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 TLL1O43897 1013 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 TYROBPO43914 113 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 IPO13O94829 963 aaKnown RBP12.44□□□□□ -0.42
RAD50-209ENST00000533482 TNFAIP8O95379 198 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 KRT6AP02538 564 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 KRT6BP04259 564 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 PRKCGP05129 697 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 VAV1P15498 845 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 POLR2EP19388 210 aaKnown RBP12.44□□□□□ -0.42
RAD50-209ENST00000533482 POU1F1P28069 291 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 MC4RP32245 332 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 KRT6CP48668 564 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 CLK1P49759 484 aaKnown RBP12.44□□□□□ -0.42
RAD50-209ENST00000533482 FOLH1Q04609 750 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 FBXL19Q6PCT2 694 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 PHACTR4Q8IZ21 702 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 PQLC1Q8N2U9 271 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 RAB42Q8N4Z0 105 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 USP29Q9HBJ7 922 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 S100A14Q9HCY8 104 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 SPAG4Q9NPE6 437 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 OPTCQ9UBM4 332 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 SRRDQ9UH36 339 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 ZFP37Q9Y6Q3 630 aaPredicted RBP12.44□□□□□ -0.42
RAD50-209ENST00000533482 STRCP1A6NGW2 1772 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 TIAM2Q8IVF5 1701 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 CCL16O15467 120 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 CNMDO75829 334 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 CDH2P19022 906 aaPredicted RBP12.44□□□□□ -0.42
RAD50-209ENST00000533482 LPOP22079 712 aaPredicted RBP12.44□□□□□ -0.42
RAD50-209ENST00000533482 PEX2P28328 305 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 HOXA11P31270 313 aaPredicted RBP12.44□□□□□ -0.42
RAD50-209ENST00000533482 AIF1P55008 147 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 NRG1Q02297 640 aaPredicted RBP12.44□□□□□ -0.42
RAD50-209ENST00000533482 INCA1Q0VD86 236 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 CPSF6Q16630 551 aaKnown RBP eCLIP12.44□□□□□ -0.422e-6■□□□□ 10.6
RAD50-209ENST00000533482 SLC9B1Q4ZJI4 515 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 FNDC3BQ53EP0 1204 aaKnown RBP12.44□□□□□ -0.42
RAD50-209ENST00000533482 CLYBLQ8N0X4 340 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 RERGLQ9H628 205 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 VPS45Q9NRW7 570 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 DNAJB4Q9UDY4 337 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 STBD1O95210 358 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 NTRK1P04629 796 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 CDH5P33151 784 aaPredicted RBP12.44□□□□□ -0.42
RAD50-209ENST00000533482 KCNQ1P51787 676 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 SLC10A2Q12908 348 aaPredicted RBP12.44□□□□□ -0.42
RAD50-209ENST00000533482 ADCK1Q86TW2 530 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 RASAL3Q86YV0 1011 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 ING5Q8WYH8 240 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 LINGO1Q96FE5 620 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 TXLNGYQ9BZA5 131 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 ROGDIQ9GZN7 287 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 ZNF229Q9UJW7 825 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 TCAF1Q9Y4C2 921 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 AP4B1Q9Y6B7 739 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 FAM72CH0Y354 149 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 TRIM38O00635 465 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 IRAK2O43187 625 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 TIPRLO75663 272 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 ADH1AP07327 375 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 GSTT1P30711 240 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 FAM72AQ5TYM5 149 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 SLC9A4Q6AI14 798 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 FAM72DQ6L9T8 149 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 FAM72BQ86X60 149 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 TMEM199Q8N511 208 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 ATG16L2Q8NAA4 619 aa12.44□□□□□ -0.42
RAD50-209ENST00000533482 OR52B2Q96RD2 323 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms