RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 PLAAQ9Y263 795 aa11.44□□□□□ -0.58
TRAPPC4-213ENST00000533149 FARP1Q9Y4F1 1045 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC4-213ENST00000533149 DOCK9Q9BZ29 2069 aa11.44□□□□□ -0.58
TRAPPC4-213ENST00000533149 PRAMEF33A0A0G2JMD5 474 aa11.43□□□□□ -0.58
TRAPPC4-213ENST00000533149 D6RAR5 112 aa11.43□□□□□ -0.58
TRAPPC4-213ENST00000533149 ATP9BO43861 1147 aa11.43□□□□□ -0.58
TRAPPC4-213ENST00000533149 PRAMEF10O60809 474 aa11.43□□□□□ -0.58
TRAPPC4-213ENST00000533149 ANXA6P08133 673 aa11.43□□□□□ -0.58
TRAPPC4-213ENST00000533149 RARAP10276 462 aa11.43□□□□□ -0.58
TRAPPC4-213ENST00000533149 CD97P48960 835 aa11.43□□□□□ -0.58
TRAPPC4-213ENST00000533149 PLK1P53350 603 aa11.43□□□□□ -0.58
TRAPPC4-213ENST00000533149 SLC25A11Q02978 314 aaKnown RBP11.43□□□□□ -0.58
TRAPPC4-213ENST00000533149 DEUP1Q05D60 604 aa11.43□□□□□ -0.58
TRAPPC4-213ENST00000533149 ZFYVE27Q5T4F4 411 aa11.43□□□□□ -0.58
TRAPPC4-213ENST00000533149 CCDC181Q5TID7 509 aa11.43□□□□□ -0.58
TRAPPC4-213ENST00000533149 OTUD1Q5VV17 481 aaPredicted RBP11.43□□□□□ -0.58
TRAPPC4-213ENST00000533149 BNIPLQ7Z465 357 aa11.43□□□□□ -0.58
TRAPPC4-213ENST00000533149 POLNQ7Z5Q5 900 aa11.43□□□□□ -0.58
TRAPPC4-213ENST00000533149 ZFAND4Q86XD8 727 aa11.43□□□□□ -0.58
TRAPPC4-213ENST00000533149 CEP112Q8N8E3 955 aa11.43□□□□□ -0.58
TRAPPC4-213ENST00000533149 EXD1Q8NHP7 514 aa11.43□□□□□ -0.58
TRAPPC4-213ENST00000533149 C9orf43Q8TAL5 461 aaPredicted RBP11.43□□□□□ -0.58
TRAPPC4-213ENST00000533149 ACTRT1Q8TDG2 376 aa11.43□□□□□ -0.58
TRAPPC4-213ENST00000533149 RAPGEF5Q92565 580 aa11.43□□□□□ -0.58
TRAPPC4-213ENST00000533149 MIB2Q96AX9 1013 aa11.43□□□□□ -0.58
TRAPPC4-213ENST00000533149 RNF25Q96BH1 459 aaPredicted RBP11.43□□□□□ -0.58
TRAPPC4-213ENST00000533149 MYEOVQ96EZ4 313 aa11.43□□□□□ -0.58
TRAPPC4-213ENST00000533149 TBATAQ96M53 351 aa11.43□□□□□ -0.58
TRAPPC4-213ENST00000533149 PEBP4Q96S96 227 aa11.43□□□□□ -0.58
TRAPPC4-213ENST00000533149 FOXP3Q9BZS1 431 aa11.43□□□□□ -0.58
TRAPPC4-213ENST00000533149 B3GNT4Q9C0J1 378 aa11.43□□□□□ -0.58
TRAPPC4-213ENST00000533149 KLF15Q9UIH9 416 aa11.43□□□□□ -0.58
TRAPPC4-213ENST00000533149 TTC7AQ9ULT0 858 aaPredicted RBP11.43□□□□□ -0.58
TRAPPC4-213ENST00000533149 LOXL2Q9Y4K0 774 aa11.43□□□□□ -0.58
TRAPPC4-213ENST00000533149 SYNJ2BP-COX16A0A087WUM0 186 aa11.42□□□□□ -0.58
TRAPPC4-213ENST00000533149 POM121BA6NF01 834 aa11.42□□□□□ -0.58
TRAPPC4-213ENST00000533149 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC4-213ENST00000533149 LMO7DNF2Z398 122 aa11.42□□□□□ -0.58
TRAPPC4-213ENST00000533149 KPNA3O00505 521 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC4-213ENST00000533149 CASC3O15234 703 aaKnown RBP11.42□□□□□ -0.58
TRAPPC4-213ENST00000533149 AGFG2O95081 481 aa11.42□□□□□ -0.58
TRAPPC4-213ENST00000533149 SLU7O95391 586 aaKnown RBP11.42□□□□□ -0.58
TRAPPC4-213ENST00000533149 F9P00740 461 aa11.42□□□□□ -0.58
TRAPPC4-213ENST00000533149 KRT1P04264 644 aa11.42□□□□□ -0.58
TRAPPC4-213ENST00000533149 ATP1A2P50993 1020 aa11.42□□□□□ -0.58
TRAPPC4-213ENST00000533149 RPS21P63220 83 aaKnown RBP11.42□□□□□ -0.58
TRAPPC4-213ENST00000533149 CKAP4Q07065 602 aaKnown RBP11.42□□□□□ -0.58
TRAPPC4-213ENST00000533149 NME3Q13232 169 aa11.42□□□□□ -0.58
TRAPPC4-213ENST00000533149 NNTQ13423 1086 aa11.42□□□□□ -0.58
TRAPPC4-213ENST00000533149 PDE1CQ14123 709 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC4-213ENST00000533149 DLG2Q15700 870 aa11.42□□□□□ -0.58
TRAPPC4-213ENST00000533149 LONRF2Q1L5Z9 754 aa11.42□□□□□ -0.58
TRAPPC4-213ENST00000533149 SMTNL2Q2TAL5 461 aa11.42□□□□□ -0.58
TRAPPC4-213ENST00000533149 TMEM259Q4ZIN3 620 aa11.42□□□□□ -0.58
TRAPPC4-213ENST00000533149 ODF2Q5BJF6 829 aa11.42□□□□□ -0.58
TRAPPC4-213ENST00000533149 SEL1L2Q5TEA6 688 aa11.42□□□□□ -0.58
TRAPPC4-213ENST00000533149 TMEM164Q5U3C3 297 aa11.42□□□□□ -0.58
TRAPPC4-213ENST00000533149 SEL1L3Q68CR1 1132 aa11.42□□□□□ -0.58
TRAPPC4-213ENST00000533149 CYP4V2Q6ZWL3 525 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC4-213ENST00000533149 TAC4Q86UU9 113 aa11.42□□□□□ -0.58
TRAPPC4-213ENST00000533149 LGI2Q8N0V4 545 aa11.42□□□□□ -0.58
TRAPPC4-213ENST00000533149 KCTD6Q8NC69 237 aa11.42□□□□□ -0.58
TRAPPC4-213ENST00000533149 LRRN4CLQ8ND94 238 aa11.42□□□□□ -0.58
TRAPPC4-213ENST00000533149 MNS1Q8NEH6 495 aa11.42□□□□□ -0.58
TRAPPC4-213ENST00000533149 TMIEQ8NEW7 156 aa11.42□□□□□ -0.58
TRAPPC4-213ENST00000533149 DQX1Q8TE96 717 aaKnown RBP11.42□□□□□ -0.58
TRAPPC4-213ENST00000533149 HSPH1Q92598 858 aa11.42□□□□□ -0.58
TRAPPC4-213ENST00000533149 PGAP3Q96FM1 320 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC4-213ENST00000533149 FCRL2Q96LA5 508 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC4-213ENST00000533149 CCDC114Q96M63 670 aa11.42□□□□□ -0.58
TRAPPC4-213ENST00000533149 SERPINB11Q96P15 392 aa11.42□□□□□ -0.58
TRAPPC4-213ENST00000533149 CATSPER2Q96P56 530 aa11.42□□□□□ -0.58
TRAPPC4-213ENST00000533149 CMKLR1Q99788 373 aa11.42□□□□□ -0.58
TRAPPC4-213ENST00000533149 SLC17A9Q9BYT1 436 aa11.42□□□□□ -0.58
TRAPPC4-213ENST00000533149 FAM204AQ9H8W3 233 aa11.42□□□□□ -0.58
TRAPPC4-213ENST00000533149 DDIT4Q9NX09 232 aa11.42□□□□□ -0.58
TRAPPC4-213ENST00000533149 COX16Q9P0S2 106 aa11.42□□□□□ -0.58
TRAPPC4-213ENST00000533149 ZFR2Q9UPR6 939 aaKnown RBP11.42□□□□□ -0.58
TRAPPC4-213ENST00000533149 TLR6Q9Y2C9 796 aa11.42□□□□□ -0.58
TRAPPC4-213ENST00000533149 RELNP78509 3460 aa11.41□□□□□ -0.58
TRAPPC4-213ENST00000533149 CTAGE15A4D2H0 777 aa11.41□□□□□ -0.58
TRAPPC4-213ENST00000533149 PGRMC1O00264 195 aaKnown RBP11.41□□□□□ -0.58
TRAPPC4-213ENST00000533149 FPGTO14772 594 aa11.41□□□□□ -0.58
TRAPPC4-213ENST00000533149 FGGP02679 453 aa11.41□□□□□ -0.58
TRAPPC4-213ENST00000533149 RPLP0P05388 317 aaKnown RBP11.41□□□□□ -0.58
TRAPPC4-213ENST00000533149 CTAGE8P0CG41 777 aa11.41□□□□□ -0.58
TRAPPC4-213ENST00000533149 KDELR1P24390 212 aa11.41□□□□□ -0.58
TRAPPC4-213ENST00000533149 CETN2P41208 172 aa11.41□□□□□ -0.58
TRAPPC4-213ENST00000533149 CXCR3P49682 368 aa11.41□□□□□ -0.58
TRAPPC4-213ENST00000533149 PTK2BQ14289 1009 aa11.41□□□□□ -0.58
TRAPPC4-213ENST00000533149 LLGL1Q15334 1064 aa11.41□□□□□ -0.58
TRAPPC4-213ENST00000533149 PRRT3Q5FWE3 981 aa11.41□□□□□ -0.58
TRAPPC4-213ENST00000533149 ERMARDQ5T6L9 678 aa11.41□□□□□ -0.58
TRAPPC4-213ENST00000533149 FHL5Q5TD97 284 aa11.41□□□□□ -0.58
TRAPPC4-213ENST00000533149 KIAA1161Q6NSJ0 714 aa11.41□□□□□ -0.58
TRAPPC4-213ENST00000533149 MFSD7Q6UXD7 560 aa11.41□□□□□ -0.58
TRAPPC4-213ENST00000533149 SPOCD1Q6ZMY3 1216 aa11.41□□□□□ -0.58
TRAPPC4-213ENST00000533149 Q6ZVU0 165 aa11.41□□□□□ -0.58
TRAPPC4-213ENST00000533149 CTAGE6Q86UF2 777 aa11.41□□□□□ -0.58
TRAPPC4-213ENST00000533149 FAM131BQ86XD5 332 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms