RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 RBP3P10745 1247 aa19.92■□□□□ 0.78
CPSF1-209ENST00000532725 CYP2A6P11509 494 aaPredicted RBP19.92■□□□□ 0.78
CPSF1-209ENST00000532725 CSRP1P21291 193 aaKnown RBP19.92■□□□□ 0.78
CPSF1-209ENST00000532725 CA4P22748 312 aa19.92■□□□□ 0.78
CPSF1-209ENST00000532725 LHCGRP22888 699 aa19.92■□□□□ 0.78
CPSF1-209ENST00000532725 NFKBIAP25963 317 aa19.92■□□□□ 0.78
CPSF1-209ENST00000532725 IGFALSP35858 605 aa19.92■□□□□ 0.78
CPSF1-209ENST00000532725 RABIFP47224 123 aa19.92■□□□□ 0.78
CPSF1-209ENST00000532725 LRRC14Q15048 493 aa19.92■□□□□ 0.78
CPSF1-209ENST00000532725 SLC14A2Q15849 920 aa19.92■□□□□ 0.78
CPSF1-209ENST00000532725 CNGA3Q16281 694 aa19.92■□□□□ 0.78
CPSF1-209ENST00000532725 KDM7AQ6ZMT4 941 aa19.92■□□□□ 0.78
CPSF1-209ENST00000532725 PID1Q7Z2X4 250 aa19.92■□□□□ 0.78
CPSF1-209ENST00000532725 DGLUCYQ7Z3D6 616 aa19.92■□□□□ 0.78
CPSF1-209ENST00000532725 REXO1L1PQ8IX06 675 aa19.92■□□□□ 0.78
CPSF1-209ENST00000532725 SPATA22Q8NHS9 363 aa19.92■□□□□ 0.78
CPSF1-209ENST00000532725 COQ10AQ96MF6 247 aa19.92■□□□□ 0.78
CPSF1-209ENST00000532725 TRIB3Q96RU7 358 aa19.92■□□□□ 0.78
CPSF1-209ENST00000532725 TRHDEQ9UKU6 1024 aa19.92■□□□□ 0.78
CPSF1-209ENST00000532725 GOLGA6L9A6NEM1 432 aa19.91■□□□□ 0.78
CPSF1-209ENST00000532725 ANKRD66B4E2M5 251 aa19.91■□□□□ 0.78
CPSF1-209ENST00000532725 MT-CYBP00156 380 aaPredicted RBP19.91■□□□□ 0.78
CPSF1-209ENST00000532725 PTMAP06454 111 aaKnown RBP19.91■□□□□ 0.78
CPSF1-209ENST00000532725 EPHB1P54762 984 aa19.91■□□□□ 0.78
CPSF1-209ENST00000532725 IRF4Q15306 451 aa19.91■□□□□ 0.78
CPSF1-209ENST00000532725 CRTC1Q6UUV9 634 aa19.91■□□□□ 0.78
CPSF1-209ENST00000532725 USP45Q70EL2 814 aa19.91■□□□□ 0.78
CPSF1-209ENST00000532725 TSPAN33Q86UF1 283 aa19.91■□□□□ 0.78
CPSF1-209ENST00000532725 TTC13Q8NBP0 860 aa19.91■□□□□ 0.78
CPSF1-209ENST00000532725 TLR10Q9BXR5 811 aa19.91■□□□□ 0.78
CPSF1-209ENST00000532725 LRRK1Q38SD2 2015 aa19.91■□□□□ 0.78
CPSF1-209ENST00000532725 SPTBN2O15020 2390 aa19.9■□□□□ 0.78
CPSF1-209ENST00000532725 A0A0U1RQS6 177 aa19.9■□□□□ 0.78
CPSF1-209ENST00000532725 SPTY2D1-AS1A0A0U1RR47 76 aa19.9■□□□□ 0.78
CPSF1-209ENST00000532725 SH3BP5O60239 455 aa19.9■□□□□ 0.78
CPSF1-209ENST00000532725 KCNK5O95279 499 aa19.9■□□□□ 0.78
CPSF1-209ENST00000532725 NFKB1P19838 968 aa19.9■□□□□ 0.78
CPSF1-209ENST00000532725 CCT8P50990 548 aa19.9■□□□□ 0.78
CPSF1-209ENST00000532725 YPEL5P62699 121 aa19.9■□□□□ 0.78
CPSF1-209ENST00000532725 PTSQ03393 145 aa19.9■□□□□ 0.78
CPSF1-209ENST00000532725 FZD2Q14332 565 aa19.9■□□□□ 0.78
CPSF1-209ENST00000532725 SUZ12Q15022 739 aaKnown RBP19.9■□□□□ 0.78
CPSF1-209ENST00000532725 ACOX1Q15067 660 aa19.9■□□□□ 0.78
CPSF1-209ENST00000532725 CDKN3Q16667 212 aa19.9■□□□□ 0.78
CPSF1-209ENST00000532725 QPCTQ16769 361 aa19.9■□□□□ 0.78
CPSF1-209ENST00000532725 TPRG1LQ5T0D9 272 aa19.9■□□□□ 0.78
CPSF1-209ENST00000532725 DARS2Q6PI48 645 aaKnown RBP19.9■□□□□ 0.78
CPSF1-209ENST00000532725 HSD11B1LQ7Z5J1 315 aa19.9■□□□□ 0.78
CPSF1-209ENST00000532725 PTAR1Q7Z6K3 402 aaPredicted RBP19.9■□□□□ 0.78
CPSF1-209ENST00000532725 CDKL3Q8IVW4 592 aaPredicted RBP19.9■□□□□ 0.78
CPSF1-209ENST00000532725 OXR1Q8N573 874 aa19.9■□□□□ 0.78
CPSF1-209ENST00000532725 LPCAT1Q8NF37 534 aa19.9■□□□□ 0.78
CPSF1-209ENST00000532725 FCRL5Q96RD9 977 aa19.9■□□□□ 0.78
CPSF1-209ENST00000532725 LYSMD1Q96S90 227 aa19.9■□□□□ 0.78
CPSF1-209ENST00000532725 CARD9Q9H257 536 aa19.9■□□□□ 0.78
CPSF1-209ENST00000532725 KLHL8Q9P2G9 620 aaPredicted RBP19.9■□□□□ 0.78
CPSF1-209ENST00000532725 R3HDM2Q9Y2K5 976 aaKnown RBP19.9■□□□□ 0.78
CPSF1-209ENST00000532725 TMEM131Q92545 1883 aa19.9■□□□□ 0.78
CPSF1-209ENST00000532725 GOLGA8CPA6NN73 597 aa19.89■□□□□ 0.77
CPSF1-209ENST00000532725 PSMD11O00231 422 aa19.89■□□□□ 0.77
CPSF1-209ENST00000532725 TOR1BO14657 336 aa19.89■□□□□ 0.77
CPSF1-209ENST00000532725 ARRB1P49407 418 aaPredicted RBP19.89■□□□□ 0.77
CPSF1-209ENST00000532725 IL9RQ01113 521 aa19.89■□□□□ 0.77
CPSF1-209ENST00000532725 CDK18Q07002 472 aa19.89■□□□□ 0.77
CPSF1-209ENST00000532725 BNIP3Q12983 259 aa19.89■□□□□ 0.77
CPSF1-209ENST00000532725 INPP5AQ14642 412 aa19.89■□□□□ 0.77
CPSF1-209ENST00000532725 KDELC2Q7Z4H8 507 aa19.89■□□□□ 0.77
CPSF1-209ENST00000532725 TECPR1Q7Z6L1 1165 aa19.89■□□□□ 0.77
CPSF1-209ENST00000532725 SLC13A5Q86YT5 568 aaPredicted RBP19.89■□□□□ 0.77
CPSF1-209ENST00000532725 PLA2G15Q8NCC3 412 aa19.89■□□□□ 0.77
CPSF1-209ENST00000532725 DEFB124Q8NES8 71 aa19.89■□□□□ 0.77
CPSF1-209ENST00000532725 SLC35B2Q8TB61 432 aa19.89■□□□□ 0.77
CPSF1-209ENST00000532725 SAP25Q8TEE9 199 aa19.89■□□□□ 0.77
CPSF1-209ENST00000532725 IFT43Q96FT9 208 aa19.89■□□□□ 0.77
CPSF1-209ENST00000532725 CAMK1GQ96NX5 476 aa19.89■□□□□ 0.77
CPSF1-209ENST00000532725 MLPHQ9BV36 600 aaPredicted RBP19.89■□□□□ 0.77
CPSF1-209ENST00000532725 ADGRE3Q9BY15 652 aa19.89■□□□□ 0.77
CPSF1-209ENST00000532725 UBP1Q9NZI7 540 aa19.89■□□□□ 0.77
CPSF1-209ENST00000532725 FAM153AQ9UHL3 310 aa19.89■□□□□ 0.77
CPSF1-209ENST00000532725 CACNA1AO00555 2505 aa19.89■□□□□ 0.77
CPSF1-209ENST00000532725 CAPN8A6NHC0 703 aa19.88■□□□□ 0.77
CPSF1-209ENST00000532725 GIPC1O14908 333 aa19.88■□□□□ 0.77
CPSF1-209ENST00000532725 YKT6O15498 198 aa19.88■□□□□ 0.77
CPSF1-209ENST00000532725 KCNN4O15554 427 aa19.88■□□□□ 0.77
CPSF1-209ENST00000532725 ZSCAN12O43309 604 aa19.88■□□□□ 0.77
CPSF1-209ENST00000532725 CBFA2T3O75081 653 aa19.88■□□□□ 0.77
CPSF1-209ENST00000532725 CEACAM1P13688 526 aa19.88■□□□□ 0.77
CPSF1-209ENST00000532725 PDE1CQ14123 709 aaPredicted RBP19.88■□□□□ 0.77
CPSF1-209ENST00000532725 ARHGEF7Q14155 803 aa19.88■□□□□ 0.77
CPSF1-209ENST00000532725 SEL1L2Q5TEA6 688 aa19.88■□□□□ 0.77
CPSF1-209ENST00000532725 LRRC66Q68CR7 880 aa19.88■□□□□ 0.77
CPSF1-209ENST00000532725 DENND2CQ68D51 928 aa19.88■□□□□ 0.77
CPSF1-209ENST00000532725 KDELC1Q6UW63 502 aa19.88■□□□□ 0.77
CPSF1-209ENST00000532725 OXNAD1Q96HP4 312 aaPredicted RBP19.88■□□□□ 0.77
CPSF1-209ENST00000532725 FERMT1Q9BQL6 677 aa19.88■□□□□ 0.77
CPSF1-209ENST00000532725 CAAP1Q9H8G2 361 aa19.88■□□□□ 0.77
CPSF1-209ENST00000532725 LOC285095A0A1B0GVY8 99 aa19.87■□□□□ 0.77
CPSF1-209ENST00000532725 PMPCBO75439 489 aa19.87■□□□□ 0.77
CPSF1-209ENST00000532725 EPOP01588 193 aa19.87■□□□□ 0.77
CPSF1-209ENST00000532725 ZNF30P17039 623 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms