RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 SLC1A1P43005 524 aa17.28■□□□□ 0.36
PHRF1-204ENST00000532550 MAGEA1P43355 309 aa17.28■□□□□ 0.36
PHRF1-204ENST00000532550 HK3P52790 923 aa17.28■□□□□ 0.36
PHRF1-204ENST00000532550 SRP54P61011 504 aaKnown RBP17.28■□□□□ 0.36
PHRF1-204ENST00000532550 INSM1Q01101 510 aaPredicted RBP17.28■□□□□ 0.36
PHRF1-204ENST00000532550 GBE1Q04446 702 aa17.28■□□□□ 0.36
PHRF1-204ENST00000532550 CYP4F3Q08477 520 aa17.28■□□□□ 0.36
PHRF1-204ENST00000532550 ARHGEF7Q14155 803 aa17.28■□□□□ 0.36
PHRF1-204ENST00000532550 ELOCQ15369 112 aa17.28■□□□□ 0.36
PHRF1-204ENST00000532550 DENND2CQ68D51 928 aa17.28■□□□□ 0.36
PHRF1-204ENST00000532550 CACTIN-AS1Q8N1I8 211 aa17.28■□□□□ 0.36
PHRF1-204ENST00000532550 FSTL5Q8N475 847 aaPredicted RBP17.28■□□□□ 0.36
PHRF1-204ENST00000532550 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.28■□□□□ 0.36
PHRF1-204ENST00000532550 PLA2G15Q8NCC3 412 aa17.28■□□□□ 0.36
PHRF1-204ENST00000532550 MAML1Q92585 1016 aa17.28■□□□□ 0.36
PHRF1-204ENST00000532550 FATE1Q969F0 183 aa17.28■□□□□ 0.36
PHRF1-204ENST00000532550 SCRN2Q96FV2 425 aa17.28■□□□□ 0.36
PHRF1-204ENST00000532550 WDR92Q96MX6 357 aa17.28■□□□□ 0.36
PHRF1-204ENST00000532550 LRRC61Q9BV99 259 aa17.28■□□□□ 0.36
PHRF1-204ENST00000532550 KLQ9UEF7 1012 aa17.28■□□□□ 0.36
PHRF1-204ENST00000532550 CLCA2Q9UQC9 943 aa17.28■□□□□ 0.36
PHRF1-204ENST00000532550 TTLL3Q9Y4R7 772 aa17.28■□□□□ 0.36
PHRF1-204ENST00000532550 WDFY3Q8IZQ1 3526 aa17.28■□□□□ 0.36
PHRF1-204ENST00000532550 ASXL3Q9C0F0 2248 aa17.28■□□□□ 0.36
PHRF1-204ENST00000532550 URB1O60287 2271 aaKnown RBP17.27■□□□□ 0.36
PHRF1-204ENST00000532550 CPED1A4D0V7 1026 aa17.27■□□□□ 0.36
PHRF1-204ENST00000532550 YY2O15391 372 aa17.27■□□□□ 0.36
PHRF1-204ENST00000532550 GP1BAP07359 652 aa17.27■□□□□ 0.36
PHRF1-204ENST00000532550 ALPIP09923 528 aa17.27■□□□□ 0.36
PHRF1-204ENST00000532550 TNNT1P13805 278 aa17.27■□□□□ 0.36
PHRF1-204ENST00000532550 KELP23276 732 aa17.27■□□□□ 0.36
PHRF1-204ENST00000532550 NOP2P46087 812 aaKnown RBP17.27■□□□□ 0.36
PHRF1-204ENST00000532550 RPIAP49247 311 aa17.27■□□□□ 0.36
PHRF1-204ENST00000532550 SLC10A2Q12908 348 aaPredicted RBP17.27■□□□□ 0.36
PHRF1-204ENST00000532550 TCEAL1Q15170 157 aa17.27■□□□□ 0.36
PHRF1-204ENST00000532550 ALG11Q2TAA5 492 aa17.27■□□□□ 0.36
PHRF1-204ENST00000532550 LRRC38Q5VT99 294 aa17.27■□□□□ 0.36
PHRF1-204ENST00000532550 PNCKQ6P2M8 343 aa17.27■□□□□ 0.36
PHRF1-204ENST00000532550 USP45Q70EL2 814 aa17.27■□□□□ 0.36
PHRF1-204ENST00000532550 RHOT1Q8IXI2 618 aa17.27■□□□□ 0.36
PHRF1-204ENST00000532550 CCDC13Q8IYE1 715 aa17.27■□□□□ 0.36
PHRF1-204ENST00000532550 TC2NQ8N9U0 490 aa17.27■□□□□ 0.36
PHRF1-204ENST00000532550 TPCN2Q8NHX9 752 aa17.27■□□□□ 0.36
PHRF1-204ENST00000532550 CLPBQ9H078 707 aa17.27■□□□□ 0.36
PHRF1-204ENST00000532550 DDX56Q9NY93 547 aaKnown RBP17.27■□□□□ 0.36
PHRF1-204ENST00000532550 DTLQ9NZJ0 730 aa17.27■□□□□ 0.36
PHRF1-204ENST00000532550 DKK4Q9UBT3 224 aa17.27■□□□□ 0.36
PHRF1-204ENST00000532550 LY6G6EA0A0G2JKS1 128 aa17.26■□□□□ 0.35
PHRF1-204ENST00000532550 ZNF487B1APH4 448 aa17.26■□□□□ 0.35
PHRF1-204ENST00000532550 PDE2AO00408 941 aaPredicted RBP17.26■□□□□ 0.35
PHRF1-204ENST00000532550 SPOPO43791 374 aa17.26■□□□□ 0.35
PHRF1-204ENST00000532550 OPA1O60313 960 aa17.26■□□□□ 0.35
PHRF1-204ENST00000532550 HEXIM1O94992 359 aaKnown RBP17.26■□□□□ 0.35
PHRF1-204ENST00000532550 MT-CO3P00414 261 aa17.26■□□□□ 0.35
PHRF1-204ENST00000532550 HOXC4P09017 264 aaPredicted RBP17.26■□□□□ 0.35
PHRF1-204ENST00000532550 ZFXP17010 805 aaPredicted RBP17.26■□□□□ 0.35
PHRF1-204ENST00000532550 CTPS1P17812 591 aa17.26■□□□□ 0.35
PHRF1-204ENST00000532550 TRIM23P36406 574 aa17.26■□□□□ 0.35
PHRF1-204ENST00000532550 EPHB1P54762 984 aa17.26■□□□□ 0.35
PHRF1-204ENST00000532550 NR0B2Q15466 257 aa17.26■□□□□ 0.35
PHRF1-204ENST00000532550 CNGA3Q16281 694 aa17.26■□□□□ 0.35
PHRF1-204ENST00000532550 CDKN3Q16667 212 aa17.26■□□□□ 0.35
PHRF1-204ENST00000532550 ESRP1Q6NXG1 681 aaKnown RBP17.26■□□□□ 0.35
PHRF1-204ENST00000532550 VSIG1Q86XK7 387 aa17.26■□□□□ 0.35
PHRF1-204ENST00000532550 SDR16C5Q8N3Y7 309 aa17.26■□□□□ 0.35
PHRF1-204ENST00000532550 IFI44Q8TCB0 444 aa17.26■□□□□ 0.35
PHRF1-204ENST00000532550 LRRN4Q8WUT4 740 aa17.26■□□□□ 0.35
PHRF1-204ENST00000532550 PIH1D2Q8WWB5 315 aa17.26■□□□□ 0.35
PHRF1-204ENST00000532550 FUBP1Q96AE4 644 aaKnown RBP17.26■□□□□ 0.35
PHRF1-204ENST00000532550 HDAC11Q96DB2 347 aa17.26■□□□□ 0.35
PHRF1-204ENST00000532550 NUS1Q96E22 293 aa17.26■□□□□ 0.35
PHRF1-204ENST00000532550 COQ10AQ96MF6 247 aa17.26■□□□□ 0.35
PHRF1-204ENST00000532550 PPIL1Q9Y3C6 166 aa17.26■□□□□ 0.35
PHRF1-204ENST00000532550 HEY1Q9Y5J3 304 aa17.26■□□□□ 0.35
PHRF1-204ENST00000532550 AK5Q9Y6K8 562 aa17.26■□□□□ 0.35
PHRF1-204ENST00000532550 U3KQA8 63 aa17.26■□□□□ 0.35
PHRF1-204ENST00000532550 ANKRD11Q6UB99 2663 aaPredicted RBP17.26■□□□□ 0.35
PHRF1-204ENST00000532550 APC2O95996 2303 aa17.26■□□□□ 0.35
PHRF1-204ENST00000532550 DMXL2Q8TDJ6 3036 aa17.25■□□□□ 0.35
PHRF1-204ENST00000532550 PSMD11O00231 422 aa17.25■□□□□ 0.35
PHRF1-204ENST00000532550 APOL1O14791 398 aa17.25■□□□□ 0.35
PHRF1-204ENST00000532550 JCHAINP01591 159 aa17.25■□□□□ 0.35
PHRF1-204ENST00000532550 KRT1P04264 644 aa17.25■□□□□ 0.35
PHRF1-204ENST00000532550 PDHA1P08559 390 aa17.25■□□□□ 0.35
PHRF1-204ENST00000532550 GM2AP17900 193 aa17.25■□□□□ 0.35
PHRF1-204ENST00000532550 COMTP21964 271 aa17.25■□□□□ 0.35
PHRF1-204ENST00000532550 CA4P22748 312 aa17.25■□□□□ 0.35
PHRF1-204ENST00000532550 KIAA1024LP59773 190 aa17.25■□□□□ 0.35
PHRF1-204ENST00000532550 DSC2Q02487 901 aa17.25■□□□□ 0.35
PHRF1-204ENST00000532550 SPA17Q15506 151 aa17.25■□□□□ 0.35
PHRF1-204ENST00000532550 C6orf132Q5T0Z8 1188 aa17.25■□□□□ 0.35
PHRF1-204ENST00000532550 ALG1LQ6GMV1 187 aa17.25■□□□□ 0.35
PHRF1-204ENST00000532550 LVRNQ6Q4G3 990 aa17.25■□□□□ 0.35
PHRF1-204ENST00000532550 EFL1Q7Z2Z2 1120 aaKnown RBP17.25■□□□□ 0.35
PHRF1-204ENST00000532550 GKN2Q86XP6 184 aa17.25■□□□□ 0.35
PHRF1-204ENST00000532550 CCDC170Q8IYT3 715 aa17.25■□□□□ 0.35
PHRF1-204ENST00000532550 CBARPQ8N350 705 aaPredicted RBP17.25■□□□□ 0.35
PHRF1-204ENST00000532550 OR56A4Q8NGH8 313 aa17.25■□□□□ 0.35
PHRF1-204ENST00000532550 MAPK15Q8TD08 544 aa17.25■□□□□ 0.35
PHRF1-204ENST00000532550 RNF25Q96BH1 459 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms