RNA–Protein interactions for RNA: ENST00000532538.1

BRPF3-210, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 4

Gene BRPF3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-210ENST00000532538 CCKBRP32239 447 aa15.25■□□□□ 0.03
BRPF3-210ENST00000532538 RGRP47804 291 aa15.25■□□□□ 0.03
BRPF3-210ENST00000532538 RENBPP51606 427 aa15.25■□□□□ 0.03
BRPF3-210ENST00000532538 KIAA1024LP59773 190 aa15.25■□□□□ 0.03
BRPF3-210ENST00000532538 ZNF235Q14590 738 aa15.25■□□□□ 0.03
BRPF3-210ENST00000532538 TSR1Q2NL82 804 aaKnown RBP15.25■□□□□ 0.03
BRPF3-210ENST00000532538 C14orf28Q4W4Y0 310 aa15.25■□□□□ 0.03
BRPF3-210ENST00000532538 TMEM164Q5U3C3 297 aa15.25■□□□□ 0.03
BRPF3-210ENST00000532538 SPECC1LQ69YQ0 1117 aa15.25■□□□□ 0.03
BRPF3-210ENST00000532538 PPP1R2P3Q6NXS1 205 aa15.25■□□□□ 0.03
BRPF3-210ENST00000532538 LIPIQ6XZB0 460 aa15.25■□□□□ 0.03
BRPF3-210ENST00000532538 ZSWIM9Q86XI8 627 aa15.25■□□□□ 0.03
BRPF3-210ENST00000532538 GPR156Q8NFN8 814 aa15.25■□□□□ 0.03
BRPF3-210ENST00000532538 SGF29Q96ES7 293 aa15.25■□□□□ 0.03
BRPF3-210ENST00000532538 CARS2Q9HA77 564 aaKnown RBP15.25■□□□□ 0.03
BRPF3-210ENST00000532538 FGF22Q9HCT0 170 aa15.25■□□□□ 0.03
BRPF3-210ENST00000532538 PARVAQ9NVD7 372 aa15.25■□□□□ 0.03
BRPF3-210ENST00000532538 ANO10Q9NW15 660 aa15.25■□□□□ 0.03
BRPF3-210ENST00000532538 DGKBQ9Y6T7 804 aa15.25■□□□□ 0.03
BRPF3-210ENST00000532538 RNF215Q9Y6U7 377 aa15.25■□□□□ 0.03
BRPF3-210ENST00000532538 CFAP69A5D8W1 941 aa15.24■□□□□ 0.03
BRPF3-210ENST00000532538 ERCC2P18074 760 aa15.24■□□□□ 0.03
BRPF3-210ENST00000532538 ALDH4A1P30038 563 aa15.24■□□□□ 0.03
BRPF3-210ENST00000532538 CSNK1DP48730 415 aa15.24■□□□□ 0.03
BRPF3-210ENST00000532538 MYL5Q02045 173 aa15.24■□□□□ 0.03
BRPF3-210ENST00000532538 OGDHQ02218 1023 aa15.24■□□□□ 0.03
BRPF3-210ENST00000532538 KCNC4Q03721 635 aa15.24■□□□□ 0.03
BRPF3-210ENST00000532538 AGERQ15109 404 aa15.24■□□□□ 0.03
BRPF3-210ENST00000532538 CA9Q16790 459 aa15.24■□□□□ 0.03
BRPF3-210ENST00000532538 CERCAMQ5T4B2 595 aa15.24■□□□□ 0.03
BRPF3-210ENST00000532538 RFX8Q6ZV50 586 aa15.24■□□□□ 0.03
BRPF3-210ENST00000532538 BBS5Q8N3I7 341 aa15.24■□□□□ 0.03
BRPF3-210ENST00000532538 CCL4L1Q8NHW4 92 aa15.24■□□□□ 0.03
BRPF3-210ENST00000532538 USP7Q93009 1102 aa15.24■□□□□ 0.03
BRPF3-210ENST00000532538 TMEM159Q96B96 161 aa15.24■□□□□ 0.03
BRPF3-210ENST00000532538 NUS1Q96E22 293 aa15.24■□□□□ 0.03
BRPF3-210ENST00000532538 SNRNP25Q9BV90 132 aaKnown RBP15.24■□□□□ 0.03
BRPF3-210ENST00000532538 CLMPQ9H6B4 373 aa15.24■□□□□ 0.03
BRPF3-210ENST00000532538 PHPT1Q9NRX4 125 aaPredicted RBP15.24■□□□□ 0.03
BRPF3-210ENST00000532538 SEPT3Q9UH03 358 aa15.24■□□□□ 0.03
BRPF3-210ENST00000532538 LIMA1Q9UHB6 759 aaKnown RBP15.24■□□□□ 0.03
BRPF3-210ENST00000532538 APPL1Q9UKG1 709 aa15.24■□□□□ 0.03
BRPF3-210ENST00000532538 PRAMEF33A0A0G2JMD5 474 aa15.23■□□□□ 0.03
BRPF3-210ENST00000532538 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.23■□□□□ 0.03
BRPF3-210ENST00000532538 TCRBV5S1A1TA0A578 114 aa15.23■□□□□ 0.03
BRPF3-210ENST00000532538 PRSS38A1L453 326 aa15.23■□□□□ 0.03
BRPF3-210ENST00000532538 EIF3CLB5ME19 914 aaKnown RBP15.23■□□□□ 0.03
BRPF3-210ENST00000532538 TNFRSF10CO14798 259 aa15.23■□□□□ 0.03
BRPF3-210ENST00000532538 PRAMEF10O60809 474 aa15.23■□□□□ 0.03
BRPF3-210ENST00000532538 GNPDA1P46926 289 aa15.23■□□□□ 0.03
BRPF3-210ENST00000532538 IL10RBQ08334 325 aa15.23■□□□□ 0.03
BRPF3-210ENST00000532538 ILF3Q12906 894 aaKnown RBP eCLIP15.23■□□□□ 0.03
BRPF3-210ENST00000532538 RALGDSQ12967 914 aa15.23■□□□□ 0.03
BRPF3-210ENST00000532538 RFTN1Q14699 578 aaPredicted RBP15.23■□□□□ 0.03
BRPF3-210ENST00000532538 LBRQ14739 615 aaKnown RBP15.23■□□□□ 0.03
BRPF3-210ENST00000532538 PPP1R15BQ5SWA1 713 aa15.23■□□□□ 0.03
BRPF3-210ENST00000532538 KCTD16Q68DU8 428 aa15.23■□□□□ 0.03
BRPF3-210ENST00000532538 PNCKQ6P2M8 343 aa15.23■□□□□ 0.03
BRPF3-210ENST00000532538 ARHGAP36Q6ZRI8 547 aa15.23■□□□□ 0.03
BRPF3-210ENST00000532538 DPPA4Q7L190 304 aa15.23■□□□□ 0.03
BRPF3-210ENST00000532538 SPRED1Q7Z699 444 aa15.23■□□□□ 0.03
BRPF3-210ENST00000532538 VASH2Q86V25 355 aa15.23■□□□□ 0.03
BRPF3-210ENST00000532538 PIM3Q86V86 326 aa15.23■□□□□ 0.03
BRPF3-210ENST00000532538 ZFAND4Q86XD8 727 aa15.23■□□□□ 0.03
BRPF3-210ENST00000532538 SFTPA2Q8IWL1 248 aa15.23■□□□□ 0.03
BRPF3-210ENST00000532538 ZDHHC1Q8WTX9 485 aa15.23■□□□□ 0.03
BRPF3-210ENST00000532538 NSMCE1Q8WV22 266 aa15.23■□□□□ 0.03
BRPF3-210ENST00000532538 EXTL1Q92935 676 aa15.23■□□□□ 0.03
BRPF3-210ENST00000532538 KCTD15Q96SI1 283 aaPredicted RBP15.23■□□□□ 0.03
BRPF3-210ENST00000532538 EIF3CQ99613 913 aaKnown RBP15.23■□□□□ 0.03
BRPF3-210ENST00000532538 LGR4Q9BXB1 951 aa15.23■□□□□ 0.03
BRPF3-210ENST00000532538 GSDMCQ9BYG8 508 aa15.23■□□□□ 0.03
BRPF3-210ENST00000532538 ZWILCHQ9H900 591 aa15.23■□□□□ 0.03
BRPF3-210ENST00000532538 RDH14Q9HBH5 336 aa15.23■□□□□ 0.03
BRPF3-210ENST00000532538 TAS2R14Q9NYV8 317 aa15.23■□□□□ 0.03
BRPF3-210ENST00000532538 SSUH2Q9Y2M2 353 aa15.23■□□□□ 0.03
BRPF3-210ENST00000532538 MGAQ8IWI9 3026 aa15.22■□□□□ 0.03
BRPF3-210ENST00000532538 TTC24A2A3L6 582 aaPredicted RBP15.22■□□□□ 0.03
BRPF3-210ENST00000532538 NVLO15381 856 aaKnown RBP15.22■□□□□ 0.03
BRPF3-210ENST00000532538 EFSO43281 561 aa15.22■□□□□ 0.03
BRPF3-210ENST00000532538 NOBOXO60393 691 aa15.22■□□□□ 0.03
BRPF3-210ENST00000532538 CPP00450 1065 aa15.22■□□□□ 0.03
BRPF3-210ENST00000532538 CYP2A6P11509 494 aaPredicted RBP15.22■□□□□ 0.03
BRPF3-210ENST00000532538 PNLIPP16233 465 aa15.22■□□□□ 0.03
BRPF3-210ENST00000532538 ARL4AP40617 200 aa15.22■□□□□ 0.03
BRPF3-210ENST00000532538 MAZP56270 477 aaKnown RBP15.22■□□□□ 0.03
BRPF3-210ENST00000532538 AP1S1P61966 158 aa15.22■□□□□ 0.03
BRPF3-210ENST00000532538 NSUN2Q08J23 767 aaKnown RBP eCLIP15.22■□□□□ 0.03
BRPF3-210ENST00000532538 SRSF6Q13247 344 aaKnown RBP15.22■□□□□ 0.03
BRPF3-210ENST00000532538 MAMLD1Q13495 774 aa15.22■□□□□ 0.03
BRPF3-210ENST00000532538 STX1AQ16623 288 aa15.22■□□□□ 0.03
BRPF3-210ENST00000532538 TMCO4Q5TGY1 634 aa15.22■□□□□ 0.03
BRPF3-210ENST00000532538 RAET1GQ6H3X3 334 aa15.22■□□□□ 0.03
BRPF3-210ENST00000532538 JPH3Q8WXH2 748 aaPredicted RBP15.22■□□□□ 0.03
BRPF3-210ENST00000532538 ERGIC2Q96RQ1 377 aa15.22■□□□□ 0.03
BRPF3-210ENST00000532538 MYO1AQ9UBC5 1043 aa15.22■□□□□ 0.03
BRPF3-210ENST00000532538 B4GALT6Q9UBX8 382 aa15.22■□□□□ 0.03
BRPF3-210ENST00000532538 PCDHGC4Q9Y5F7 938 aa15.22■□□□□ 0.03
BRPF3-210ENST00000532538 H3BRJ5 948 aa15.21■□□□□ 0.03
BRPF3-210ENST00000532538 NUDT21O43809 227 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms