RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 MCCC1Q96RQ3 725 aaPredicted RBP23.04■■□□□ 1.28
CAPN1-222ENST00000532285 NLGN3Q9NZ94 848 aa23.04■■□□□ 1.28
CAPN1-222ENST00000532285 DUSP10Q9Y6W6 482 aa23.04■■□□□ 1.28
CAPN1-222ENST00000532285 GOLGA6L6A8MZA4 724 aa23.03■■□□□ 1.28
CAPN1-222ENST00000532285 FFAR2O15552 330 aa23.03■■□□□ 1.28
CAPN1-222ENST00000532285 CST8O60676 142 aa23.03■■□□□ 1.28
CAPN1-222ENST00000532285 HEXIM1O94992 359 aaKnown RBP23.03■■□□□ 1.28
CAPN1-222ENST00000532285 PDHA1P08559 390 aa23.03■■□□□ 1.28
CAPN1-222ENST00000532285 GM2AP17900 193 aa23.03■■□□□ 1.28
CAPN1-222ENST00000532285 HTR1BP28222 390 aa23.03■■□□□ 1.28
CAPN1-222ENST00000532285 NIPAL4Q0D2K0 466 aa23.03■■□□□ 1.28
CAPN1-222ENST00000532285 DNAJC3Q13217 504 aa23.03■■□□□ 1.28
CAPN1-222ENST00000532285 ARHGEF7Q14155 803 aa23.03■■□□□ 1.28
CAPN1-222ENST00000532285 CNGA3Q16281 694 aa23.03■■□□□ 1.28
CAPN1-222ENST00000532285 PROX2Q3B8N5 592 aa23.03■■□□□ 1.28
CAPN1-222ENST00000532285 CCDC157Q569K6 752 aa23.03■■□□□ 1.28
CAPN1-222ENST00000532285 KIAA1328Q86T90 577 aa23.03■■□□□ 1.28
CAPN1-222ENST00000532285 ACRBPQ8NEB7 543 aa23.03■■□□□ 1.28
CAPN1-222ENST00000532285 ATL2Q8NHH9 583 aa23.03■■□□□ 1.28
CAPN1-222ENST00000532285 EXD1Q8NHP7 514 aa23.03■■□□□ 1.28
CAPN1-222ENST00000532285 RBM41Q96IZ5 413 aaKnown RBP23.03■■□□□ 1.28
CAPN1-222ENST00000532285 DUSP23Q9BVJ7 150 aa23.03■■□□□ 1.28
CAPN1-222ENST00000532285 SLC13A1Q9BZW2 595 aa23.03■■□□□ 1.28
CAPN1-222ENST00000532285 LACRTQ9GZZ8 138 aa23.03■■□□□ 1.28
CAPN1-222ENST00000532285 CAAP1Q9H8G2 361 aa23.03■■□□□ 1.28
CAPN1-222ENST00000532285 FRYQ5TBA9 3013 aa23.02■■□□□ 1.28
CAPN1-222ENST00000532285 NPIPB15A6NHN6 443 aaPredicted RBP23.02■■□□□ 1.28
CAPN1-222ENST00000532285 PSMD11O00231 422 aa23.02■■□□□ 1.28
CAPN1-222ENST00000532285 PJA2O43164 708 aa23.02■■□□□ 1.28
CAPN1-222ENST00000532285 AQP9O43315 295 aa23.02■■□□□ 1.28
CAPN1-222ENST00000532285 GIMD1P0DJR0 217 aa23.02■■□□□ 1.28
CAPN1-222ENST00000532285 TGM2P21980 687 aa23.02■■□□□ 1.28
CAPN1-222ENST00000532285 ACADVLP49748 655 aa23.02■■□□□ 1.28
CAPN1-222ENST00000532285 EPHB1P54762 984 aa23.02■■□□□ 1.28
CAPN1-222ENST00000532285 RPL26P61254 145 aaKnown RBP23.02■■□□□ 1.28
CAPN1-222ENST00000532285 PPARDQ03181 441 aa23.02■■□□□ 1.28
CAPN1-222ENST00000532285 ZBTB17Q13105 803 aa23.02■■□□□ 1.28
CAPN1-222ENST00000532285 IHHQ14623 411 aa23.02■■□□□ 1.28
CAPN1-222ENST00000532285 NFATC4Q14934 902 aa23.02■■□□□ 1.28
CAPN1-222ENST00000532285 FAXCQ5TGI0 409 aa23.02■■□□□ 1.28
CAPN1-222ENST00000532285 KAZNQ674X7 775 aa23.02■■□□□ 1.28
CAPN1-222ENST00000532285 CCDC50Q8IVM0 306 aa23.02■■□□□ 1.28
CAPN1-222ENST00000532285 PHACTR4Q8IZ21 702 aa23.02■■□□□ 1.28
CAPN1-222ENST00000532285 CBARPQ8N350 705 aaPredicted RBP23.02■■□□□ 1.28
CAPN1-222ENST00000532285 TXLNBQ8N3L3 684 aa23.02■■□□□ 1.28
CAPN1-222ENST00000532285 PLA2G15Q8NCC3 412 aa23.02■■□□□ 1.28
CAPN1-222ENST00000532285 TBATAQ96M53 351 aa23.02■■□□□ 1.28
CAPN1-222ENST00000532285 TDRD1Q9BXT4 1180 aaKnown RBP23.02■■□□□ 1.28
CAPN1-222ENST00000532285 SPASTQ9UBP0 616 aa23.02■■□□□ 1.28
CAPN1-222ENST00000532285 APOBEC3BQ9UH17 382 aaKnown RBP23.02■■□□□ 1.28
CAPN1-222ENST00000532285 RPL26L1Q9UNX3 145 aaKnown RBP23.02■■□□□ 1.28
CAPN1-222ENST00000532285 CHKBQ9Y259 395 aa23.02■■□□□ 1.28
CAPN1-222ENST00000532285 OR1A2Q9Y585 309 aa23.02■■□□□ 1.28
CAPN1-222ENST00000532285 GOLGA4Q13439 2230 aaKnown RBP23.02■■□□□ 1.28
CAPN1-222ENST00000532285 RFPL3O75679 317 aa23.01■■□□□ 1.27
CAPN1-222ENST00000532285 CTPS1P17812 591 aa23.01■■□□□ 1.27
CAPN1-222ENST00000532285 MARCKSL1P49006 195 aa23.01■■□□□ 1.27
CAPN1-222ENST00000532285 BLKP51451 505 aa23.01■■□□□ 1.27
CAPN1-222ENST00000532285 ILKQ13418 452 aa23.01■■□□□ 1.27
CAPN1-222ENST00000532285 DENND2CQ68D51 928 aa23.01■■□□□ 1.27
CAPN1-222ENST00000532285 ESRP1Q6NXG1 681 aaKnown RBP23.01■■□□□ 1.27
CAPN1-222ENST00000532285 TMPRSS7Q7RTY8 843 aa23.01■■□□□ 1.27
CAPN1-222ENST00000532285 GALNT15Q8N3T1 639 aa23.01■■□□□ 1.27
CAPN1-222ENST00000532285 CNTD1Q8N815 330 aa23.01■■□□□ 1.27
CAPN1-222ENST00000532285 KIAA1524Q8TCG1 905 aa23.01■■□□□ 1.27
CAPN1-222ENST00000532285 LMX1AQ8TE12 382 aa23.01■■□□□ 1.27
CAPN1-222ENST00000532285 KRT35Q92764 455 aa23.01■■□□□ 1.27
CAPN1-222ENST00000532285 NUS1Q96E22 293 aa23.01■■□□□ 1.27
CAPN1-222ENST00000532285 PCDH9Q9HC56 1237 aa23.01■■□□□ 1.27
CAPN1-222ENST00000532285 SEPT10Q9P0V9 454 aa23.01■■□□□ 1.27
CAPN1-222ENST00000532285 SAE1Q9UBE0 346 aaPredicted RBP23.01■■□□□ 1.27
CAPN1-222ENST00000532285 PNMA8BQ9ULN7 279 aaPredicted RBP23.01■■□□□ 1.27
CAPN1-222ENST00000532285 hCG_1818297A0A087WSY0 165 aa23■■□□□ 1.27
CAPN1-222ENST00000532285 A0A0J9YYE9 177 aa23■■□□□ 1.27
CAPN1-222ENST00000532285 K7ESM1 405 aa23■■□□□ 1.27
CAPN1-222ENST00000532285 PRLP01236 227 aa23■■□□□ 1.27
CAPN1-222ENST00000532285 TRBC1P01850 177 aa23■■□□□ 1.27
CAPN1-222ENST00000532285 HOXC4P09017 264 aaPredicted RBP23■■□□□ 1.27
CAPN1-222ENST00000532285 LHCGRP22888 699 aa23■■□□□ 1.27
CAPN1-222ENST00000532285 ACP1P24666 158 aa23■■□□□ 1.27
CAPN1-222ENST00000532285 CTNNA1P35221 906 aaKnown RBP23■■□□□ 1.27
CAPN1-222ENST00000532285 HNF1BP35680 557 aa23■■□□□ 1.27
CAPN1-222ENST00000532285 TRIM23P36406 574 aa23■■□□□ 1.27
CAPN1-222ENST00000532285 COPS2P61201 443 aa23■■□□□ 1.27
CAPN1-222ENST00000532285 LLGL1Q15334 1064 aa23■■□□□ 1.27
CAPN1-222ENST00000532285 PPP2R5EQ16537 467 aa23■■□□□ 1.27
CAPN1-222ENST00000532285 PRRT3Q5FWE3 981 aa23■■□□□ 1.27
CAPN1-222ENST00000532285 PNCKQ6P2M8 343 aa23■■□□□ 1.27
CAPN1-222ENST00000532285 ENPP7Q6UWV6 458 aa23■■□□□ 1.27
CAPN1-222ENST00000532285 DHRS13Q6UX07 377 aa23■■□□□ 1.27
CAPN1-222ENST00000532285 UNQ6494/PRO21346Q6UXR6 183 aa23■■□□□ 1.27
CAPN1-222ENST00000532285 RBFAQ8N0V3 343 aa23■■□□□ 1.27
CAPN1-222ENST00000532285 FAM181AQ8N9Y4 354 aa23■■□□□ 1.27
CAPN1-222ENST00000532285 P3H4Q92791 437 aa23■■□□□ 1.27
CAPN1-222ENST00000532285 GATA6Q92908 595 aa23■■□□□ 1.27
CAPN1-222ENST00000532285 WDR92Q96MX6 357 aa23■■□□□ 1.27
CAPN1-222ENST00000532285 TCEAL2Q9H3H9 227 aaPredicted RBP23■■□□□ 1.27
CAPN1-222ENST00000532285 DNPEPQ9ULA0 475 aa23■■□□□ 1.27
CAPN1-222ENST00000532285 PCDHA3Q9Y5H8 950 aa23■■□□□ 1.27
CAPN1-222ENST00000532285 CACNB4O00305 520 aaPredicted RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms